Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,674,1160GT26.6% 110.9 / 11.3 65L68F (TTG→TTT) tqsAautoinducer 2 exporter
Reads supporting (aligned to +/- strand):  ref base G (22/25);  new base T (17/0);  total (40/25)
Fisher's exact test for biased strand distribution p-value = 6.83e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01
Rejected as consensus: Frequency below/above cutoff threshold.

AGACATTATTATTAGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGTCATCAA  >  NC_000913/1673872‑1674363
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                    
aGACATTATTATTAGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGTTTTT‑GATGA‑cc                                                                                                                                                                                                                                                               >  1:417924/1‑251 (MQ=255)
       attattaGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCat‑catc                                                                                                                                                                                                                                                        <  1:175104/250‑1 (MQ=255)
        ttattaGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GTTGT‑Ccat‑catgct                                                                                                                                                                                                                                                      >  1:48034/1‑248 (MQ=255)
               cAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGTTGATTTT‑TATGA‑CCCA‑CATCGGGATgggg                                                                                                                                                                                                                                               >  1:301215/1‑249 (MQ=255)
                aaaGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGGCGGTTTT‑GTTGA‑ccctcctcgcgagggggg                                                                                                                                                                                                                                               >  2:546724/1‑235 (MQ=255)
                 aaGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑t                                                                                                                                                                                                                                            <  2:484165/251‑1 (MQ=255)
                       gaaAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGtt                                                                                                                                                                                                                                      <  2:7131/251‑1 (MQ=255)
                         aaaaaCGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGGTTTT‑TATGA‑CCAC‑CATCGtggtgggggtgggggtgt                                                                                                                                                                                                                                     >  2:240603/1‑239 (MQ=255)
                          aaaaAGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGATTTT‑TGTGA‑CCAC‑CCTCGTGGCTGCGA‑TGGTGTTGCt                                                                                                                                                                                                                                   >  2:59654/1‑251 (MQ=255)
                              cGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTa                                                                                                                                                                                                                               <  1:458705/251‑1 (MQ=255)
                                             cAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGCTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTcc                                                                                                                                                                                                              <  1:464885/251‑1 (MQ=255)
                                              aaaGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATTCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCcg                                                                                                                                                                                                             <  1:320098/251‑1 (MQ=255)
                                                     atcatcACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGTTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCaa                                                                                                                                                                                                      <  1:535997/251‑1 (MQ=255)
                                                              cTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGTTTT‑TGGGA‑CCAT‑CATCGTGATGGCGG‑TGGGGTTGCTATTTA‑CTTATCTTGGGTTC‑GCGCTCAAa‑ga‑ggtg                                                                                                                                                                                             >  1:535125/1‑246 (MQ=255)
                                                                 aaTGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGTTTT‑GATGA‑CCAT‑CATCGGGATGGCGG‑TGGGGTTGCTATTTG‑CTTATCT‑GGGTTCCGCGCCCAAC‑GA‑GTTGAcgcg                                                                                                                                                                                        >  1:107591/1‑251 (MQ=255)
                                                                    ggCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGGGTTT‑GTTTA‑CCCT‑CATCGTGGTGGGGG‑TGGGGTTGCTTTTTG‑CTTTTAT‑GGGtttccagctcaaaaaggtggagcgggc                                                                                                                                                                                       >  1:97841/1‑226 (MQ=255)
                                                                     gCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑TATGA‑CCCT‑CATCGGGATGGCGA‑TGGTGGTTCTATTAG‑CTTATCT‑TGGGTCCGCGCTCAAA‑GA‑GTTGACGCGG‑ACg                                                                                                                                                                                   >  1:246033/1‑251 (MQ=255)
                                                                             aTCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑AATCGTGGTGGCGG‑TGGTGTTGCTATTAG‑CTTATTTTGGGTTC‑GCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTAACGcc                                                                                                                                                                          >  1:288676/1‑250 (MQ=255)
                                                                                           gggAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑TATGA‑CCAT‑CATCGTGATGGCGG‑TGGTGTTGCTATTAG‑Ct                                                                                                                                                                                                                           >  1:52021/1‑193 (MQ=255)
                                                                                           gggAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑Ct                                                                                                                                                                                                                           <  2:52021/193‑1 (MQ=255)
                                                                                                       cATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGAcgcc‑gc                                                                                                                                              <  2:515989/251‑1 (MQ=255)
                                                                                                                  gCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTTGATTTT‑TGTGA‑CCAT‑CATCGTGACGGCGG‑TGGGGTTGGTATTAG‑ATTTTCT‑TGGGTCCGCGCCCCAC‑GA‑GTTGACGCGG‑ACG‑GTACCGCAATATCCC‑AACTCTATTATGACGCC‑GCCGCAAACGCtt                                                                                                                                   >  2:544898/1‑251 (MQ=255)
                                                                                                                    ggTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGATTT‑GATGA‑CCAT‑CCTCGTGATGGCGG‑TGGGGTTGCTATTTG‑CTTATCT‑GGGTTTCGCGCTCCAC‑GG‑GGTGAAGCGG‑GCG‑TTACCCCAAAATTGCCAAC‑CTATTTTGTCGCC‑GCCGCAAGCGCTTg                                                                                                                                  >  1:333820/1‑250 (MQ=255)
                                                                                                                         ccGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGAGTGCCGCGTGTACTGGCGGAGTTGATTTT‑TTAGC‑CCAT‑CATCCTGGTGGCGG‑TGGTGTTTGTTTTGA‑CTCTTCT‑GCGGTCCGCGCTCCAC‑CG‑GGTGAAGCGG‑ACG‑TTACCACTATATCCC‑AACTCTTTTATAACGCC‑GCTgacaacacttggaccgt                                                                                                                            >  1:452040/1‑235 (MQ=255)
                                                                                                                           gTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑TATGA‑CCAT‑CATCGGGGTGGCGG‑TGGGGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCg‑ttt                                                                                                                         >  1:346972/1‑250 (MQ=255)
                                                                                                                             tttGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGTCCATTTT‑TTTGA‑CCCT‑CCTCGGGGGGGGGG‑TGGGGGTTCTATTAGACTTTTTT‑GGGT‑CCGCGCCCAAC‑AA‑GGTGTCGCGG‑ACG‑GTTCCGCCATATCGC‑AACTCTCTTTTGAGACC‑CCTGCAAGCGCCTGAAcacttttt                                                                                                                        >  2:242563/1‑244 (MQ=255)
                                                                                                                                     cgAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGTTTT‑GATGA‑ACAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTTTCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑GTACCGCAATATCGC‑CACTCTATTATGACGCC‑CCTGCAAGCGCCTGAACCG‑TTGTTGCAAcgcg                                                                                                               >  1:479050/1‑251 (MQ=255)
                                                                                                                                           catcGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑TTTGA‑CCAT‑CATCGGTATGGCGG‑TGGGGGTGCTATTAG‑CTTTTAT‑TGGGTACGCGCTCCACAGG‑GTTG‑CGCGG‑GCGGTTAC‑GCAAAATCGC‑CAATCTATTATGACGCC‑GCTGCCAGCGGTTATACCG‑ttgttgtaaaccggagggg                                                                                                         >  2:457847/1‑238 (MQ=255)
                                                                                                                                               gTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑TTTGA‑CCCT‑CATCGGGGTGGCGGGTGG‑GTTGCTATTAG‑CTTTTCT‑GGGGTCCGCGCCCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATTGC‑CACTCTTTTTTGAAGCC‑GCTGCCAGCGCTTGAACCG‑TTTTTGCAAAGCGGAGGGGTTgg                                                                                                     >  2:431314/1‑250 (MQ=255)
                                                                                                                                                      ttATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑Ctt                                                                                                                                                                                                                          <  2:268827/135‑1 (MQ=255)
                                                                                                                                                      ttATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGGTTTT‑GATGA‑ACAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑Ctt                                                                                                                                                                                                                          >  1:268827/1‑135 (MQ=255)
                                                                                                                                                             cGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGTTTT‑GATGA‑CCCT‑CCTCGTGATGGCGA‑TGGTGGTGCTTTTAG‑CTTATTT‑GGGGTTCGCGCTCAAC‑GA‑GTTTACGCGG‑GCG‑TTACCGCAATATCGC‑CACCCTATTATGACGCC‑GCTGCAAGCGCTTGTAACG‑TTGTTGCAAAGCGGAGGGGTTGT‑CGGCTCAGTTTAcc                                                                                      >  1:104428/1‑251 (MQ=255)
                                                                                                                                                              gCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCa                                                                                     <  2:534619/251‑1 (MQ=255)
                                                                                                                                                                attattTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGc                                                                                   <  1:544898/251‑1 (MQ=255)
                                                                                                                                                                   atttattGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑GTTTTCT‑GGGGTTCGCGCTCAAC‑GG‑GTTGACGCGG‑ACG‑GTACCGCAATATTGC‑AACTCTATTATGAACCC‑GCTGCAAGCGCCTGAACCG‑GTGTTGCCAAGCGTAGGGGTTGA‑CGTCTCAGTTGACCCGCTgg                                                                                >  1:447458/1‑251 (MQ=255)
                                                                                                                                                                    tttattGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGATTTT‑GATGA‑CCAT‑CCTTGTTATGGCGA‑TGGTGTTGGTCTTAA‑TTTTTCT‑GGGTTCCGCGGCCAAC‑AA‑GATGACGCGGGAC‑‑TTACCGCAATTTCGC‑AACTATTTTATTCCGCCTGC‑GCGAGAGCTTGAACCG‑TTTGTGCCACGCGTCGGGactggcctctccgtttgtccgctggg                                                                                >  2:138959/1‑226 (MQ=255)
                                                                                                                                                                     ttattGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTTTCT‑GGGGTTCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTAACGCAAAAACGC‑AACTCTATTATTACGCC‑GCTTCCAGCGCTTTAACCG‑CTGTTGCAAAGCGGAGGGATTTC‑CGGCTCCGATGACCAGCGGgcg                                                                              >  2:185226/1‑251 (MQ=255)
                                                                                                                                                                           cTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGCTTTT‑TATTA‑CCAT‑CATCGTGATGGCGG‑TGGTGGTGCTCTTAG‑CTTATCT‑GGGTTCCGCGCTCCAA‑GA‑GTTGACGCGG‑ACG‑TTACCGCCATATCGC‑CACTCCATTTTGACCAC‑GCTGCCAGCGCTTTAACCG‑TTGTTGCAACGCGTAGGGATTGG‑CTTCTCACTTgtaccgctcgggcattat                                                                        >  2:79966/1‑234 (MQ=255)
                                                                                                                                                                           cTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGTCGATTTTTGA‑GA‑CCAT‑CATCGCGATGGGGG‑TGGTGTTGCTCTTAG‑CTTTTTT‑TGGGTCCGCGCTCAAC‑GG‑GTTGACCCGG‑ACG‑TTACACCAATATCGC‑CAATCTATTTTGACGCCCGC‑GCCAGCGCTTGAACCG‑TTGTTGCTACGCGTCGGGGTTGGGCG‑CTCAGTTGGCCAGCTGGCGCATtat                                                                        >  2:95032/1‑251 (MQ=255)
                                                                                                                                                                           cTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGACGAATTT‑TATTA‑CCAT‑CATCGCGGTGGCGA‑TGGCGTTGCTATTAGTCTT‑TCTTGGATTCC‑CGCTCAAA‑GA‑GGTGCGGCGG‑GCG‑TTACCGCAACATCCC‑AAATCCATTATGACGCC‑GCTCCCAACGCTTTAAACGCTTATTGCA‑CGCGTTGGGATTGA‑CGtcttcgttgtacagctgggcgattat                                                                        >  1:220492/1‑228 (MQ=255)
                                                                                                                                                                                 ttCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGTCGAATTT‑TAAGA‑CCCC‑CATCGGGAAGGCGA‑TGGTGTTTCTATTAG‑CTTTTTT‑GGGGTTCGCGCTCAAC‑GG‑GTTGACGCGG‑ACG‑CTACCCCACTATCGC‑AAATCTATTTTTACCCC‑CCCGCAAGCGCTTTAACCG‑TTTTTGCAAAGCGTAGGGACTGA‑CGGCCCAGGTGACCCGCTGGCGCCTTAAAttttt                                                                  >  1:379470/1‑248 (MQ=255)
                                                                                                                                                                                  tCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGGCGGTTTT‑TATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATTT‑GGGGTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑GTTCCCCCATATCGC‑AACTCTATTATGACGCC‑GCTGCCAGCGCCTGAACCG‑TTGGTGCCAAGCGGAGGGATTTA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTTATc                                                                 >  1:38803/1‑251 (MQ=255)
                                                                                                                                                                                         ccGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAAcgc                                                          <  1:459045/251‑1 (MQ=255)
                                                                                                                                                                                         ccGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGCGTGGCTTTT‑‑TTCATCCCT‑CATCCTGATGGCGG‑TGGGGCTGCTATTAG‑CTTTTCT‑GGGGTCCCCGCTCCAC‑GA‑GGTGACGCGG‑TCG‑GTACCGCCATATCCC‑AACCCTTTTATGACGAC‑CCTCCCAGCGCTTGTACCC‑TTTTTTCACCGCGTAGGGGTTGA‑CCGCTCACTTGGCCAGccgggctactttattgatccgcacgc                                                          >  2:107874/1‑226 (MQ=255)
                                                                                                                                                                                           gCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGATTTT‑TATGA‑CCAT‑CCTCGTGATGGCGA‑TGGGGTTGCTATTAG‑CTTATCT‑GGGTTCCCCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGGAGCC‑CCCGCAAGCGCTTGAACCG‑TTTTTGCCACGCGGAGGGGTTGA‑CGTCCCATGTGACCAGCTGGCGCATTATTTTTATCCGCACgcgg                                                        >  2:517155/1‑251 (MQ=255)
                                                                                                                                                                                               gTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTTCCGAGTTT‑GGTGA‑CCATACA‑CGGGAAGGCGG‑TGGTGTTGGCATTAG‑CTTTTTTTGGGTTT‑GCGCTCAAA‑GAATTTAAGGGGG‑GCG‑T‑ACCCCCATATCGC‑AACTCCATTATGTCGCC‑CCTGGCAGCGCTTGAACCG‑CTGGTGCAACGCGTCTGGATTGA‑CGTCCTAGTTGACCAGCTGGCGGATTATATTGATCCGAACgcggcg                                                      >  1:167098/1‑249 (MQ=255)
                                                                                                                                                                                                          ggTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTc                                          <  1:30637/250‑1 (MQ=255)
                                                                                                                                                                                                          ggTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGTGATTTT‑GGTGG‑CCCT‑CATCGTGGTGGCGG‑TGGGGTTTCTATTAG‑CTTATCT‑GGGGTCCGCGCTCCAA‑GA‑GGTGTCGCGG‑GCG‑TTTCCGCCATATCTC‑AACTCTATTATGACGCC‑GCTGCAAGCCGTTTAAACG‑TTGTTTCCAAGCGGAGGGATTTG‑CGGCTCAGTTGTCCCGCTGGCGCAGTATATTTATCCGCAcggcgcggtggagttgcccc                                         >  2:44083/1‑233 (MQ=255)
                                                                                                                                                                                                           gTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑CA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATTACGCC‑GCTGCAAGCGCTTGAAACG‑TTGTTGCAACGCGTAGGGGTTGA‑CGTCTCCGTTGACCCGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCAc                                        >  1:377813/1‑251 (MQ=255)
                                                                                                                                                                                                           gTCCGCTGGCGTGTGCCGCGTGTACTGGCGGCGGCGATTTT‑GGTGG‑CCCA‑CATCGTGATGGCGG‑CGGGGTTGCGAATAG‑ATTATTT‑GGGGTCCGGGATCAAC‑GG‑GGTGAAGCGG‑ACG‑TTACCGCCATATCGC‑AACTCCTTTATTACGCC‑CCCGCAAGCGCTTGGACCG‑TTGTTGCAACGCGAAGGGAATGA‑CGGCCAAGGTGACCCACTGGCGCATTATATTGATCCggaccccgaggtgtccgttcccac                                        >  2:151861/1‑228 (MQ=255)
                                                                                                                                                                                                                  ggCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATAGTGATCCGAACGCGGCGATGACGTTGCTCACCAACt                                   <  1:380756/249‑1 (MQ=255)
                                                                                                                                                                                                                  ggCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GAAGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTTTTAA‑CTTATCT‑TGGGTCCGCGCTCAAC‑GG‑GTTGACGCGG‑GCG‑TTACCGCAATATCGC‑AACTCTATTTTGACGCC‑CCTGCCAGCGCTTGAACCG‑TTGTTTCAACGCGTAGGGGATGA‑CGGCTCAGGTGACCAGCTTGCGCATTATATTGATCCGAACgcggcggtggcggttctccccaaattt                                 >  1:376988/1‑230 (MQ=255)
                                                                                                                                                                                                                     gtgtGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCCT‑CATCGTGATGGCGC‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑CCG‑ATCCCGCAATATCGC‑AAATCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCCACGCGTATGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTTATCCGAACACGGCGATGACGTTGCTCACCAACTTAttt                              >  1:460380/1‑250 (MQ=255)
                                                                                                                                                                                                                         gCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGc                          <  1:353894/251‑1 (MQ=255)
                                                                                                                                                                                                                           cgcgTGTACTTGCTGTGTCGATTTT‑GATGT‑CCAT‑CATCGTGATGGCTA‑TGGTGTTGCTATTAG‑CTTAGCT‑GGGTTCTTCGCTCATC‑GA‑GTTGTCGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑TCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCGCAGTTGACCAGCTGGCACATTATATTGATCCTAACTCGGCGATGACATTGCTCACCAACTTATTGTCGCat                        <  2:518152/251‑2 (MQ=255)
                                                                                                                                                                                                                                  aCTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCt                  <  1:191675/250‑1 (MQ=255)
                                                                                                                                                                                                                                    tGGCGGGGACGATTTT‑GAAGA‑CTAT‑CATCGTGATGGCGA‑TTGTGTTGCTATTAG‑CCTATAT‑GGGGTCCGCGCTCAAC‑GC‑GTTGCCGCGG‑ACG‑TTACCGCAATATCGC‑CACTATATTATGAAGCC‑GCTGCAAGCGCCTGAACCC‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCCGATGGCTCATGATATTGATCCGAACGCGGCGATGACGTTGCTCACAAACTTATTTATGCAGTTATCTAAt               >  2:481947/1‑251 (MQ=255)
                                                                                                                                                                                                                                     ggCGGTGTCTATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAAt               <  2:531137/250‑1 (MQ=255)
                                                                                                                                                                                                                                     ggCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAAt               <  2:429684/250‑1 (MQ=255)
                                                                                                                                                                                                                                         gtgtCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCAt          <  1:517155/251‑1 (MQ=255)
                                                                                                                                                                                                                                           gtCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGt        <  1:82149/251‑1 (MQ=255)
                                                                                                                                                                                                                                           gtCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCA‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGt        >  2:82149/1‑251 (MQ=255)
                                                                                                                                                                                                                                           gtCGATTTT‑GATGA‑CCAG‑CAGCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGTCGATGACGTTGCTCTCCAACTGATTGACGCAGTTATCTAATTCCATg         <  2:417924/250‑1 (MQ=255)
                                                                                                                                                                                                                                             cGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGtc       <  1:34964/250‑1 (MQ=255)
                                                                                                                                                                                                                                                  tt‑GATGA‑CCAT‑CATCGTGATGGCGA‑TTGTGTTGCTATTAG‑CTTATCT‑GGTTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTTCTCACCAACTTATTGACGCAGTTATCTAATGCCATGTCATCaa  <  2:461731/250‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                    
AGACATTATTATTAGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTT‑GATGA‑CCAT‑CATCGTGATGGCGA‑TGGTGTTGCTATTAG‑CTTATCT‑GGGTTCCGCGCTCAAC‑GA‑GTTGACGCGG‑ACG‑TTACCGCAATATCGC‑AACTCTATTATGACGCC‑GCTGCAAGCGCTTGAACCG‑TTGTTGCAACGCGTAGGGATTGA‑CGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGTCATCAA  >  NC_000913/1673872‑1674363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑