Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,674,1160GT26.6% 110.9 / 11.3 65L68F (TTG→TTTtqsAautoinducer 2 exporter
Reads supporting (aligned to +/- strand):  ref base G (22/25);  new base T (17/0);  total (40/25)
Fisher's exact test for biased strand distribution p-value = 6.83e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01
Rejected as consensus: Frequency below/above cutoff threshold.

AGACATTATTATTAGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGTCATCAA  >  NC_000913/1673872‑1674363
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                    
aGACATTATTATTAGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGTTTTTGATGAcc                                                                                                                                                                                                                                                               >  1:417924/1‑251 (MQ=255)
       attattaGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCatcatc                                                                                                                                                                                                                                                        <  1:175104/250‑1 (MQ=255)
        ttattaGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGTTGTCcatcatgct                                                                                                                                                                                                                                                      >  1:48034/1‑248 (MQ=255)
               cAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGTTGATTTTTATGACCCACATCGGGATgggg                                                                                                                                                                                                                                               >  1:301215/1‑249 (MQ=255)
                aaaGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGGCGGTTTTGTTGAccctcctcgcgagggggg                                                                                                                                                                                                                                               >  2:546724/1‑235 (MQ=255)
                 aaGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGAt                                                                                                                                                                                                                                            <  2:484165/251‑1 (MQ=255)
                       gaaAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGtt                                                                                                                                                                                                                                      <  2:7131/251‑1 (MQ=255)
                         aaaaaCGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGGTTTTTATGACCACCATCGtggtgggggtgggggtgt                                                                                                                                                                                                                                     >  2:240603/1‑239 (MQ=255)
                          aaaaAGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGATTTTTGTGACCACCCTCGTGGCTGCGATGGTGTTGCt                                                                                                                                                                                                                                   >  2:59654/1‑251 (MQ=255)
                              cGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTa                                                                                                                                                                                                                               <  1:458705/251‑1 (MQ=255)
                                             cAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGCTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTcc                                                                                                                                                                                                              <  1:464885/251‑1 (MQ=255)
                                              aaaGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATTCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCcg                                                                                                                                                                                                             <  1:320098/251‑1 (MQ=255)
                                                     atcatcACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGTTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCaa                                                                                                                                                                                                      <  1:535997/251‑1 (MQ=255)
                                                              cTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGTTTTTGGGACCATCATCGTGATGGCGGTGGGGTTGCTATTTACTTATCTTGGGTTCGCGCTCAAagaggtg                                                                                                                                                                                             >  1:535125/1‑246 (MQ=255)
                                                                 aaTGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGTTTTGATGACCATCATCGGGATGGCGGTGGGGTTGCTATTTGCTTATCTGGGTTCCGCGCCCAACGAGTTGAcgcg                                                                                                                                                                                        >  1:107591/1‑251 (MQ=255)
                                                                    ggCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGGGTTTGTTTACCCTCATCGTGGTGGGGGTGGGGTTGCTTTTTGCTTTTATGGGtttccagctcaaaaaggtggagcgggc                                                                                                                                                                                       >  1:97841/1‑226 (MQ=255)
                                                                     gCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTTATGACCCTCATCGGGATGGCGATGGTGGTTCTATTAGCTTATCTTGGGTCCGCGCTCAAAGAGTTGACGCGGACg                                                                                                                                                                                   >  1:246033/1‑251 (MQ=255)
                                                                             aTCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATAATCGTGGTGGCGGTGGTGTTGCTATTAGCTTATTTTGGGTTCGCGCTCAACGAGTTGACGCGGACGTTAACGcc                                                                                                                                                                          >  1:288676/1‑250 (MQ=255)
                                                                                           gggAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTTATGACCATCATCGTGATGGCGGTGGTGTTGCTATTAGCt                                                                                                                                                                                                                           >  1:52021/1‑193 (MQ=255)
                                                                                           gggAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCt                                                                                                                                                                                                                           <  2:52021/193‑1 (MQ=255)
                                                                                                       cATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGAcgccgc                                                                                                                                              <  2:515989/251‑1 (MQ=255)
                                                                                                                  gCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTTGATTTTTGTGACCATCATCGTGACGGCGGTGGGGTTGGTATTAGATTTTCTTGGGTCCGCGCCCCACGAGTTGACGCGGACGGTACCGCAATATCCCAACTCTATTATGACGCCGCCGCAAACGCtt                                                                                                                                   >  2:544898/1‑251 (MQ=255)
                                                                                                                    ggTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGATTTGATGACCATCCTCGTGATGGCGGTGGGGTTGCTATTTGCTTATCTGGGTTTCGCGCTCCACGGGGTGAAGCGGGCGTTACCCCAAAATTGCCAACCTATTTTGTCGCCGCCGCAAGCGCTTg                                                                                                                                  >  1:333820/1‑250 (MQ=255)
                                                                                                                         ccGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGAGTGCCGCGTGTACTGGCGGAGTTGATTTTTTAGCCCATCATCCTGGTGGCGGTGGTGTTTGTTTTGACTCTTCTGCGGTCCGCGCTCCACCGGGTGAAGCGGACGTTACCACTATATCCCAACTCTTTTATAACGCCGCTgacaacacttggaccgt                                                                                                                            >  1:452040/1‑235 (MQ=255)
                                                                                                                           gTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTTATGACCATCATCGGGGTGGCGGTGGGGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCgttt                                                                                                                         >  1:346972/1‑250 (MQ=255)
                                                                                                                             tttGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGTCCATTTTTTTGACCCTCCTCGGGGGGGGGGTGGGGGTTCTATTAGACTTTTTTGGGTCCGCGCCCAACAAGGTGTCGCGGACGGTTCCGCCATATCGCAACTCTCTTTTGAGACCCCTGCAAGCGCCTGAAcacttttt                                                                                                                        >  2:242563/1‑244 (MQ=255)
                                                                                                                                     cgAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGTTTTGATGAACATCATCGTGATGGCGATGGTGTTGCTATTAGCTTTTCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGGTACCGCAATATCGCCACTCTATTATGACGCCCCTGCAAGCGCCTGAACCGTTGTTGCAAcgcg                                                                                                               >  1:479050/1‑251 (MQ=255)
                                                                                                                                           catcGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTTTTGACCATCATCGGTATGGCGGTGGGGGTGCTATTAGCTTTTATTGGGTACGCGCTCCACAGGGTTGCGCGGGCGGTTACGCAAAATCGCCAATCTATTATGACGCCGCTGCCAGCGGTTATACCGttgttgtaaaccggagggg                                                                                                         >  2:457847/1‑238 (MQ=255)
                                                                                                                                               gTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTTTTGACCCTCATCGGGGTGGCGGGTGGGTTGCTATTAGCTTTTCTGGGGTCCGCGCCCAACGAGTTGACGCGGACGTTACCGCAATATTGCCACTCTTTTTTGAAGCCGCTGCCAGCGCTTGAACCGTTTTTGCAAAGCGGAGGGGTTgg                                                                                                     >  2:431314/1‑250 (MQ=255)
                                                                                                                                                      ttATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCtt                                                                                                                                                                                                                          <  2:268827/135‑1 (MQ=255)
                                                                                                                                                      ttATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGGTTTTGATGAACATCATCGTGATGGCGATGGTGTTGCTATTAGCtt                                                                                                                                                                                                                          >  1:268827/1‑135 (MQ=255)
                                                                                                                                                             cGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGGTTTTGATGACCCTCCTCGTGATGGCGATGGTGGTGCTTTTAGCTTATTTGGGGTTCGCGCTCAACGAGTTTACGCGGGCGTTACCGCAATATCGCCACCCTATTATGACGCCGCTGCAAGCGCTTGTAACGTTGTTGCAAAGCGGAGGGGTTGTCGGCTCAGTTTAcc                                                                                      >  1:104428/1‑251 (MQ=255)
                                                                                                                                                              gCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCa                                                                                     <  2:534619/251‑1 (MQ=255)
                                                                                                                                                                attattTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGc                                                                                   <  1:544898/251‑1 (MQ=255)
                                                                                                                                                                   atttattGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGGTTTTCTGGGGTTCGCGCTCAACGGGTTGACGCGGACGGTACCGCAATATTGCAACTCTATTATGAACCCGCTGCAAGCGCCTGAACCGGTGTTGCCAAGCGTAGGGGTTGACGTCTCAGTTGACCCGCTgg                                                                                >  1:447458/1‑251 (MQ=255)
                                                                                                                                                                    tttattGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGATTTTGATGACCATCCTTGTTATGGCGATGGTGTTGGTCTTAATTTTTCTGGGTTCCGCGGCCAACAAGATGACGCGGGACTTACCGCAATTTCGCAACTATTTTATTCCGCCTGCGCGAGAGCTTGAACCGTTTGTGCCACGCGTCGGGactggcctctccgtttgtccgctggg                                                                                >  2:138959/1‑226 (MQ=255)
                                                                                                                                                                     ttattGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTTTCTGGGGTTCGCGCTCAACGAGTTGACGCGGACGTTAACGCAAAAACGCAACTCTATTATTACGCCGCTTCCAGCGCTTTAACCGCTGTTGCAAAGCGGAGGGATTTCCGGCTCCGATGACCAGCGGgcg                                                                              >  2:185226/1‑251 (MQ=255)
                                                                                                                                                                           cTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGCTTTTTATTACCATCATCGTGATGGCGGTGGTGGTGCTCTTAGCTTATCTGGGTTCCGCGCTCCAAGAGTTGACGCGGACGTTACCGCCATATCGCCACTCCATTTTGACCACGCTGCCAGCGCTTTAACCGTTGTTGCAACGCGTAGGGATTGGCTTCTCACTTgtaccgctcgggcattat                                                                        >  2:79966/1‑234 (MQ=255)
                                                                                                                                                                           cTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGTCGATTTTTGAGACCATCATCGCGATGGGGGTGGTGTTGCTCTTAGCTTTTTTTGGGTCCGCGCTCAACGGGTTGACCCGGACGTTACACCAATATCGCCAATCTATTTTGACGCCCGCGCCAGCGCTTGAACCGTTGTTGCTACGCGTCGGGGTTGGGCGCTCAGTTGGCCAGCTGGCGCATtat                                                                        >  2:95032/1‑251 (MQ=255)
                                                                                                                                                                           cTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGACGAATTTTATTACCATCATCGCGGTGGCGATGGCGTTGCTATTAGTCTTTCTTGGATTCCCGCTCAAAGAGGTGCGGCGGGCGTTACCGCAACATCCCAAATCCATTATGACGCCGCTCCCAACGCTTTAAACGCTTATTGCACGCGTTGGGATTGACGtcttcgttgtacagctgggcgattat                                                                        >  1:220492/1‑228 (MQ=255)
                                                                                                                                                                                 ttCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGTCGAATTTTAAGACCCCCATCGGGAAGGCGATGGTGTTTCTATTAGCTTTTTTGGGGTTCGCGCTCAACGGGTTGACGCGGACGCTACCCCACTATCGCAAATCTATTTTTACCCCCCCGCAAGCGCTTTAACCGTTTTTGCAAAGCGTAGGGACTGACGGCCCAGGTGACCCGCTGGCGCCTTAAAttttt                                                                  >  1:379470/1‑248 (MQ=255)
                                                                                                                                                                                  tCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGGGGCGGTTTTTATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATTTGGGGTCCGCGCTCAACGAGTTGACGCGGACGGTTCCCCCATATCGCAACTCTATTATGACGCCGCTGCCAGCGCCTGAACCGTTGGTGCCAAGCGGAGGGATTTACGTCTCAGTTGACCAGCTGGCGCATTATATTTATc                                                                 >  1:38803/1‑251 (MQ=255)
                                                                                                                                                                                         ccGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAAcgc                                                          <  1:459045/251‑1 (MQ=255)
                                                                                                                                                                                         ccGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGCGTGGCTTTTTTCATCCCTCATCCTGATGGCGGTGGGGCTGCTATTAGCTTTTCTGGGGTCCCCGCTCCACGAGGTGACGCGGTCGGTACCGCCATATCCCAACCCTTTTATGACGACCCTCCCAGCGCTTGTACCCTTTTTTCACCGCGTAGGGGTTGACCGCTCACTTGGCCAGccgggctactttattgatccgcacgc                                                          >  2:107874/1‑226 (MQ=255)
                                                                                                                                                                                           gCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGCGATTTTTATGACCATCCTCGTGATGGCGATGGGGTTGCTATTAGCTTATCTGGGTTCCCCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGGAGCCCCCGCAAGCGCTTGAACCGTTTTTGCCACGCGGAGGGGTTGACGTCCCATGTGACCAGCTGGCGCATTATTTTTATCCGCACgcgg                                                        >  2:517155/1‑251 (MQ=255)
                                                                                                                                                                                               gTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTTCCGAGTTTGGTGACCATACACGGGAAGGCGGTGGTGTTGGCATTAGCTTTTTTTGGGTTTGCGCTCAAAGAATTTAAGGGGGGCGTACCCCCATATCGCAACTCCATTATGTCGCCCCTGGCAGCGCTTGAACCGCTGGTGCAACGCGTCTGGATTGACGTCCTAGTTGACCAGCTGGCGGATTATATTGATCCGAACgcggcg                                                      >  1:167098/1‑249 (MQ=255)
                                                                                                                                                                                                          ggTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTc                                          <  1:30637/250‑1 (MQ=255)
                                                                                                                                                                                                          ggTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGGTGATTTTGGTGGCCCTCATCGTGGTGGCGGTGGGGTTTCTATTAGCTTATCTGGGGTCCGCGCTCCAAGAGGTGTCGCGGGCGTTTCCGCCATATCTCAACTCTATTATGACGCCGCTGCAAGCCGTTTAAACGTTGTTTCCAAGCGGAGGGATTTGCGGCTCAGTTGTCCCGCTGGCGCAGTATATTTATCCGCAcggcgcggtggagttgcccc                                         >  2:44083/1‑233 (MQ=255)
                                                                                                                                                                                                           gTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACCAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATTACGCCGCTGCAAGCGCTTGAAACGTTGTTGCAACGCGTAGGGGTTGACGTCTCCGTTGACCCGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCAc                                        >  1:377813/1‑251 (MQ=255)
                                                                                                                                                                                                           gTCCGCTGGCGTGTGCCGCGTGTACTGGCGGCGGCGATTTTGGTGGCCCACATCGTGATGGCGGCGGGGTTGCGAATAGATTATTTGGGGTCCGGGATCAACGGGGTGAAGCGGACGTTACCGCCATATCGCAACTCCTTTATTACGCCCCCGCAAGCGCTTGGACCGTTGTTGCAACGCGAAGGGAATGACGGCCAAGGTGACCCACTGGCGCATTATATTGATCCggaccccgaggtgtccgttcccac                                        >  2:151861/1‑228 (MQ=255)
                                                                                                                                                                                                                  ggCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATAGTGATCCGAACGCGGCGATGACGTTGCTCACCAACt                                   <  1:380756/249‑1 (MQ=255)
                                                                                                                                                                                                                  ggCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGAAGACCATCATCGTGATGGCGATGGTGTTGCTTTTAACTTATCTTGGGTCCGCGCTCAACGGGTTGACGCGGGCGTTACCGCAATATCGCAACTCTATTTTGACGCCCCTGCCAGCGCTTGAACCGTTGTTTCAACGCGTAGGGGATGACGGCTCAGGTGACCAGCTTGCGCATTATATTGATCCGAACgcggcggtggcggttctccccaaattt                                 >  1:376988/1‑230 (MQ=255)
                                                                                                                                                                                                                     gtgtGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCCTCATCGTGATGGCGCTGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGCCGATCCCGCAATATCGCAAATCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCCACGCGTATGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTTATCCGAACACGGCGATGACGTTGCTCACCAACTTAttt                              >  1:460380/1‑250 (MQ=255)
                                                                                                                                                                                                                         gCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGc                          <  1:353894/251‑1 (MQ=255)
                                                                                                                                                                                                                           cgcgTGTACTTGCTGTGTCGATTTTGATGTCCATCATCGTGATGGCTATGGTGTTGCTATTAGCTTAGCTGGGTTCTTCGCTCATCGAGTTGTCGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCTCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCGCAGTTGACCAGCTGGCACATTATATTGATCCTAACTCGGCGATGACATTGCTCACCAACTTATTGTCGCat                        <  2:518152/251‑2 (MQ=255)
                                                                                                                                                                                                                                  aCTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCt                  <  1:191675/250‑1 (MQ=255)
                                                                                                                                                                                                                                    tGGCGGGGACGATTTTGAAGACTATCATCGTGATGGCGATTGTGTTGCTATTAGCCTATATGGGGTCCGCGCTCAACGCGTTGCCGCGGACGTTACCGCAATATCGCCACTATATTATGAAGCCGCTGCAAGCGCCTGAACCCTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCCGATGGCTCATGATATTGATCCGAACGCGGCGATGACGTTGCTCACAAACTTATTTATGCAGTTATCTAAt               >  2:481947/1‑251 (MQ=255)
                                                                                                                                                                                                                                     ggCGGTGTCTATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAAt               <  2:531137/250‑1 (MQ=255)
                                                                                                                                                                                                                                     ggCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAAt               <  2:429684/250‑1 (MQ=255)
                                                                                                                                                                                                                                         gtgtCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCAt          <  1:517155/251‑1 (MQ=255)
                                                                                                                                                                                                                                           gtCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGt        <  1:82149/251‑1 (MQ=255)
                                                                                                                                                                                                                                           gtCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCAGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGt        >  2:82149/1‑251 (MQ=255)
                                                                                                                                                                                                                                           gtCGATTTTGATGACCAGCAGCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGTCGATGACGTTGCTCTCCAACTGATTGACGCAGTTATCTAATTCCATg         <  2:417924/250‑1 (MQ=255)
                                                                                                                                                                                                                                             cGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGtc       <  1:34964/250‑1 (MQ=255)
                                                                                                                                                                                                                                                  ttGATGACCATCATCGTGATGGCGATTGTGTTGCTATTAGCTTATCTGGTTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTTCTCACCAACTTATTGACGCAGTTATCTAATGCCATGTCATCaa  <  2:461731/250‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                    
AGACATTATTATTAGCAAAGGAAGAAAAAACGGGGACAAGCATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGTCATCAA  >  NC_000913/1673872‑1674363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: