| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 59 [0] | [0] 59 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 59 (0.860) | 52/494 | 0.2 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
AGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTT > NC_000913/2789730‑2790210 | acgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCg > 1:419086‑M2/234‑251 (MQ=255) gttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGt > 1:453421‑M2/228‑250 (MQ=255) cccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGAttt < 1:351407‑M2/30‑1 (MQ=255) cccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGAttt < 1:333423‑M2/30‑1 (MQ=255) ccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaagttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGattatt < 1:75859‑M2/40‑1 (MQ=255) cccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgtgcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTggcg < 2:451917‑M2/44‑1 (MQ=255) accaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTggcg > 2:49520‑M2/208‑251 (MQ=255) accagagtcatccgatgaagtcctcagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgcagcgaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGCTGTATGATTTTGTGATTATTGGCGGCGGCATCATCCGCATGT‑CGAcc > 2:485780‑M2/185‑251 (MQ=255) agagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCa < 1:529541‑M2/71‑1 (MQ=255) catccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgaagggggactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCCTGT‑CGACCGCCATGc > 2:270776‑M2/177‑250 (MQ=255) atccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcactttgtcccgcgaagtccgacgagaactaattaaatccgaaccttttaggcccatttatatgcccaacgaaaagctctattgtttacgttgggcctaaacgcagggcgactccccGCGCAAAGGAATTTA‑GCGGATGTCTGATTTTGTGATTATTCGCGCCGGCATCCTCGCCATGT‑ccaccgcccttcac > 2:76165‑M2/176‑245 (MQ=255) atccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCa > 1:79770‑M2/176‑250 (MQ=255) ccgattaagtcctaagagcccgcacgtcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctcgattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCAtgcatct < 2:216438‑M2/78‑4 (MQ=255) gagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGAGGCATCATCGGCATGT‑CGACCGCCCTGCATCTGATTGAGGTCTATcc > 2:362684‑M2/159‑251 (MQ=255) cccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGGCCGCCATGCAACTGATTGATGTCTATCCgg > 2:316195‑M2/156‑250 (MQ=255) cggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCCTCATCGGCATGT‑CGACCGCCATGCCACTGATTGATGTTTATCCGGACgcccc > 2:24852‑M2/150‑250 (MQ=255) gcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCAAGGAACTGATTGATGCCTATCCGGACGCCCGCAtt > 2:17123‑M2/146‑251 (MQ=255) caagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgcagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCCTCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTAGCCGGACGCCCGCATTg > 2:129924‑M2/145‑251 (MQ=255) aagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGAATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGc > 1:547199‑M2/144‑251 (MQ=255) agccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCg > 1:65623‑M2/143‑251 (MQ=255) gcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGaa > 1:430389‑M2/133‑250 (MQ=255) ccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGcc > 2:323274‑M2/122‑251 (MQ=255) ccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGcc > 1:367760‑M2/122‑251 (MQ=255) gtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTc < 1:103766‑M2/140‑1 (MQ=255) cgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCAcc > 2:360231‑M2/108‑250 (MQ=255) gaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCCACTGATTGATGTCTATCCGGAACCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGAc > 2:167380‑M2/105‑251 (MQ=255) cgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGcc > 1:263550‑M2/99‑250 (MQ=255) aagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCCCCCCGGCCTGTACCCAGACGggccca > 2:197898‑M2/97‑248 (MQ=255) actaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAgcg > 1:275339‑M2/91‑251 (MQ=255) ctaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAgcgg > 1:382030‑M2/90‑251 (MQ=255) aattaaacccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGG‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGCCGGGCCACAACAgcggcg < 2:236580‑M2/164‑1 (MQ=255) ttaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTg > 1:108190‑M2/86‑251 (MQ=255) aatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATc > 1:218485‑M2/83‑251 (MQ=255) atccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATGGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATcc < 1:316131‑M2/170‑1 (MQ=255) ccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTCTGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGATGCTGGAAAAAGAGTCCGCACCGGCCTGTCACCAGACGGGCCCCAAACGCGGCGGGATCCATGGCgg > 2:369246‑M2/75‑251 (MQ=255) cttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCggg > 1:462427‑M2/74‑251 (MQ=255) ttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgccgggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGGTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCCAGACGGGCCCCAACAACGGCGTGATCCATGGCgggg > 2:322658‑M2/73‑251 (MQ=255) gggcccattgataggcccaaccaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTa < 2:37472‑M2/183‑1 (MQ=255) tgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCCTGCAACTGATTGATGTCTATCCGGACGCCCGCCTTGCGTTGCTGGAAACAGAGTCCGCCCCGGCCTGTCCCCCGACGGGCCACAACAGCGGCGTGATCCATGCCGGggtctatttcccgc > 2:148467‑M2/61‑245 (MQ=255) gataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACacgtc > 2:437472‑M2/60‑249 (MQ=255) ataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTAcacgtcc < 1:24852‑M2/193‑4 (MQ=255) taggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGCATCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATTCCGGGGTCTATTacacgtccc > 2:24045‑M2/58‑247 (MQ=255) aacgaaaagctctattgtttacgttgggcctaaacgcaggaagcctccccGCGCAAAGGAATTGA‑GCGGATGTATGATTCTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCt < 1:76389‑M2/201‑1 (MQ=255) gaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGa > 1:550874‑M2/48‑250 (MQ=255) agctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGAATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGAAGCCCGCATTGCGATGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGAGGGATCCATGCCGGGGGCTATTACACGTCCCGCAGCCTGaagggg > 2:343567‑M2/44‑249 (MQ=255) ctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGCATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGAACGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGt > 2:400508‑M2/40‑251 (MQ=255) attgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACCACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGttt > 1:134186‑M2/38‑251 (MQ=255) cgttgggcctaaacgcagggagaccccccGCGCAAAGGAATTGG‑GCGGATGTATGATTTTGTGATTATGGGCGGCGGCATCATCGGCATGT‑CGACCGCCAGGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGCCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGc < 2:203919‑M2/222‑1 (MQ=255) ggcctaaacgcggggagcctccccGGGCAAAGGAATTGA‑GCGGATGTATGATTGTGTGATTATTGGCGTCGGCATCAGCGTCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGGGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGaa < 2:231840‑M2/227‑1 (MQ=255) taaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACcg > 1:354333‑M2/21‑251 (MQ=255) aaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACcgc > 1:310521‑M2/20‑251 (MQ=255) aaacgcagggagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGAGATTCTTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCCTGCCGGGGGCTATTCAACGTCCGGCCGCCTGAAGGCGCAGTTTTGCCGGGGGGGAaacccc > 2:325659‑M2/20‑249 (MQ=255) cgcagggagactccccCCGCAAGGGATTTGA‑GCGGTTTGATGATTTTGGGATTATTGGGGGCGGCATTATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTTTATCCGGACGCCGGCATTGCGTTGCTGGAAAAGGAGTCCGCCCCTGCCTGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGcc < 2:417808‑M2/235‑1 (MQ=255) aagggagaccccccGCGCAAAGGAA‑TGAGGCGGATGTATGATTTGGTGATTTTTGTCGGCGGCACCACCGGCA‑GTGCGACCGCCAGGCAACTGATTGATGTCTATCCGGACGCCGGCAGTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCAAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGccac < 2:59274‑M2/237‑1 (MQ=255) gagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCaaa < 1:323274‑M2/241‑1 (MQ=255) gagactccccGCGCAAAGGAATTGA‑GCGGATGTATGATTTGGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCaaa < 1:519553‑M2/241‑1 (MQ=255) gactccccGCGCAAAGGAATGGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGCCCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGc < 1:528699‑M2/243‑1 (MQ=255) cccGCGCAAAGGAATTGG‑GGGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCAGGT‑CGACCGCCAGGCAACTGATTGATTTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCtttt < 2:462427‑M2/248‑1 (MQ=255) cccGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTATATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGGCTATTACACCTCCGGCAGCCTGAAAGCGCAGGTTTCCCTGGCGGGAAACCGCACCACCCAAGCCtttt > 2:111859‑M2/4‑251 (MQ=255) | AGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGCAAAGGAATTGA‑GCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGT‑CGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTT > NC_000913/2789730‑2790210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |