Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,825,796 Δ4,947 bp srlA[gutQ] srlA, srlE, srlB, srlD, gutM, srlR, [gutQ]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2825796 2830742 4947 60 [0] [0] 60 srlA–[gutQ] srlA,srlE,srlB,srlD,gutM,srlR,[gutQ]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 28257950 (0.000)59 (0.860) 52/494 0.2 100% intergenic (‑219/‑37) mltB/srlA membrane‑bound lytic murein transglycosylase B/sorbitol‑specific PTS enzyme IIC2 component
?NC_000913 2830743 = 0 (0.000)coding (931/966 nt) gutQ D‑arabinose 5‑phosphate isomerase GutQ

GGAAGCAATGTTACATAACGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTTTGGTAATAAAACAATAAATCCTGAAGGAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTGATTAATTTTATCGGTCAGCATCGTATTGAACGTTTTGCTCAACGTTGCGCCGGTAACCCTGTTTCCCGTTAC  >  NC_000913/2825545‑2826035
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                
ggAAGCAATGTTACATAACGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGCCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGt                                                                                                                                                                                                                                                  <  2:480682/251‑1 (MQ=255)
     cAATGTTACATAACGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacct                                                                                                                                                                                                                                             >  2:95809‑M1/1‑246 (MQ=255)
      aaTGTTACATACCGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAAGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTCTCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctt                                                                                                                                                                                                                                            >  2:253336‑M1/1‑245 (MQ=255)
                aaCGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttct                                                                                                                                                                                                                                  >  1:417421‑M1/1‑235 (MQ=255)
                             cATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggat                                                                                                                                                                                                                     >  1:379896‑M1/1‑222 (MQ=255)
                              aTGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggatt                                                                                                                                                                                                                    >  1:444217‑M1/1‑221 (MQ=255)
                                   gggTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggcagatcggagagc                                                                                                                                                                                                               >  2:106230‑M1/1‑216 (MQ=255)
                                   gggTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggc                                                                                                                                                                                                                           <  1:106230‑M1/239‑24 (MQ=255)
                                    ggTCCATTGAACAGATTCCACCAGGGTCAAGGATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGGCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTGCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatatctatcaggccgggattatttaa                                                                                                                                                                                                              <  2:323577‑M1/251‑37 (MQ=255)
                                                              gCAAGTATGGTAAAGCATCACGCCCCGCCCAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccag                                                                                                                                                                                    <  2:270835‑M1/251‑63 (MQ=255)
                                                                           aGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGTCTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCTAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatcctgcaatcccagacgtttcgccagccgatgcaggttg                                                                                                                                                                       <  1:328809‑M1/251‑76 (MQ=255)
                                                                              aTCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcg                                                                                                                                                                    >  2:509622‑M1/1‑173 (MQ=255)
                                                                                 aCGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCTCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTGTCAATCTGATTAGATTAGGTTGCCGTaacctgcagtatttctatcaggccggtattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacg                                                                                                                                                                 <  1:425519‑M1/251‑82 (MQ=255)
                                                                                            aacgcagcggtAGTCACGACCCGATACCGACCTTACATAACTCACCTCATTCCCCTCGCTATCCTTTTATTCCAACTTTCAAATTAAAATATATATCTTACATTTTGCGATCAAAATAACACTTTTAAATCTTTTAATCTGATTAGATTAGGTGGACGTaacctgcaggatttctatcaggtcgggattctttaatccttcaatctcagacgtttcgccagccgctgcaggttggcgccgtcggtttcccg                                                                                                                                                      >  2:553923‑M1/6‑159 (MQ=255)
                                                                                                 aGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatcc                                                                                                                                                 <  1:156285‑M1/251‑98 (MQ=255)
                                                                                                  gCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccg                                                                                                                                                <  2:46725‑M1/251‑99 (MQ=255)
                                                                                                   cGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgc                                                                                                                                               <  1:331287‑M1/251‑100 (MQ=255)
                                                                                                           cctGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggc                                                                                                                                       <  2:126535‑M1/250‑108 (MQ=255)
                                                                                                             tGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggc                                                                                                                                       >  1:284828‑M1/1‑142 (MQ=255)
                                                                                                              gCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagc                                                                                                                                    >  2:465934‑M1/1‑141 (MQ=255)
                                                                                                              gCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagc                                                                                                                                    <  2:501159‑M1/251‑111 (MQ=255)
                                                                                                                ccGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagccc                                                                                                                                  <  1:378060‑M1/251‑113 (MQ=255)
                                                                                                                     aCGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAAGATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagtt                                                                                                                              <  1:381835‑M1/250‑117 (MQ=255)
                                                                                                                      cGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAATCTTTCAACTTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagacgctgcaggttggcgacgtcggtttccagcctccgcgcgcaggaagcccagttgg                                                                                                                            >  2:371076‑M1/1‑133 (MQ=255)
                                                                                                                       ggACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtg                                                                                                                           <  1:312374‑M1/251‑120 (MQ=255)
                                                                                                                          cTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccag                                                                                                                                                                                    >  2:456497‑M1/1‑129 (MQ=255)
                                                                                                                          cTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccag                                                                                                                                                                                    <  1:456497‑M1/191‑63 (MQ=255)
                                                                                                                              aCATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattt                                                                                                                    <  1:465934‑M1/251‑127 (MQ=255)
                                                                                                                                aTAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttg                                                                                                                  >  1:83229‑M1/1‑123 (MQ=255)
                                                                                                                                  aactcaactcATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcatgttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtg                                                                                                                <  2:458431‑M1/251‑131 (MQ=255)
                                                                                                                                           caTTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcagccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcct                                                                                                       <  1:181767‑M1/251‑140 (MQ=255)
                                                                                                                                                    cGCTTTCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatag                                                                                              <  2:379896‑M1/251‑149 (MQ=255)
                                                                                                                                                    cGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatag                                                                                              <  1:371206‑M1/251‑149 (MQ=255)
                                                                                                                                                     gCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagt                                                                                             >  1:80141‑M1/1‑102 (MQ=255)
                                                                                                                                                        aTCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatcgtttc                                                                                          >  2:319346‑M1/1‑99 (MQ=255)
                                                                                                                                                        aTCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttc                                                                                          >  1:510256‑M1/1‑99 (MQ=255)
                                                                                                                                                                aTTCAAACTTGCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctgg                                                                                   <  1:235610‑M1/250‑160 (MQ=255)
                                                                                                                                                                 ttCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctgga                                                                                  >  1:231965‑M1/1‑90 (MQ=255)
                                                                                                                                                                  tCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaac                                                                                >  1:45244‑M1/1‑89 (MQ=255)
                                                                                                                                                                            aaattagtatatttatctttCACTTTGAGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgaaggttggcgacgacggtttcaagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgattctgtcg                                                                      >  2:396535‑M1/9‑79 (MQ=255)
                                                                                                                                                                             aaTTAAAATATTTATCTTTCATTTTGCGATCAAAATCACAATTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGAaacctgcaggatttctatcatgccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtaggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgactagtttcaagctggaccgcttctgtcgc                                                                     >  2:190579‑M1/1‑78 (MQ=255)
                                                                                                                                                                             aaTTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTACATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgc                                                                     >  2:479240‑M1/1‑78 (MQ=255)
                                                                                                                                                                              aataaAATATTTTTCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagtcgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgct                                                                    <  2:73940‑M1/249‑175 (MQ=255)
                                                                                                                                                                                              ttCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttg                                                      <  1:434627‑M1/249‑189 (MQ=255)
                                                                                                                                                                                                cATTTTGCGAACAAAATATCACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccggtattatttaatccttcaatcccagccgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgctt                                                   <  2:307670‑M1/250‑192 (MQ=255)
                                                                                                                                                                                                   tttGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaac                                                <  1:254342‑M1/250‑195 (MQ=255)
                                                                                                                                                                                                    ttGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcagtcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaaca                                               <  2:157035‑M1/250‑196 (MQ=255)
                                                                                                                                                                                                      gCGATCAAAATAACACGTTTAAATCTTTCAACCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttaaatcccagacgttccgccagccgatgcaggttggagacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtagcttcacgcaggctttgcttaacaac                                             <  2:87086‑M1/250‑198 (MQ=255)
                                                                                                                                                                                                            aaaaTAACACTTTTAAATCTTTAAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggcacgcttctgtcgcttcacgcaggctttgcttaacaacgggcacc                                      >  2:476879‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                                     cTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccact                             >  1:541150‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                                        ttaatcctttcaaTCTGATTAGATTAGGTTGCCTTaccctgcaggatttctatcaggccgggtttatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgccgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcccgcaggttttgcttaacaacgggcaccgccgccacttc                           <  1:101993‑M1/244‑216 (MQ=255)
                                                                                                                                                                                                                            aTCTTTGAATCTGATTCGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttattccttcaatcccagacgtttcgcaagccgatgcaggttgacgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttttgccagtgcctgacgaatagttgcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggccccgccgccacctctggcg                      >  2:3802‑M1/1‑31 (MQ=255)
                                                                                                                                                                                                                            aTCTTTCAATCTGATAAGATTAGGTAGCCGTaccctgcacgatttctatcaggccgtgattatttaatccttcactcccagacgtttcgccagccgatgcaggttggcgacgaaggcttccagcatccgcgagcaggcagcccagttgtgctgattttgtgccagtgcttgacgaatagtttcacgctggaacgcttctgtcgcttcacgcacgctttgcttaacaacgggcaccgcccccccttctggcc                      >  2:173728‑M1/1‑31 (MQ=255)
                                                                                                                                                                                                                              cTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccacttctggcgtc                    >  1:174942‑M1/1‑29 (MQ=255)
                                                                                                                                                                                                                                ttCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccacttctggcgtcgg                  >  1:322154‑M1/1‑27 (MQ=255)
                                                                                                                                                                                                                                  cAATCTGATTAGATTAGGTTGCCGTaccctggagtttttctaccaggccggttttatttaacccttcaatcccggacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagtggtgatgattttgtgccagtgcctgacgaatattttcacgctggaacgcttctgtcgcttcccgcaggttttgcttaacagcgggcaccgccgccatttcgggcgtcggca                <  2:204372‑M1/251‑227 (MQ=255)
                                                                                                                                                                                                                                  cAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccacttctggcgtcggcc                >  2:74450‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                                                   aaTCTGATTAGCTTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagacgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacgacgggcaccgccgccacttctggcgtcggca                >  2:256660‑M1/1‑24 (MQ=255)
                                                                                                                                                                                                                                      cTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccacttctggcgtcggcaacgt            >  1:505021‑M1/1‑21 (MQ=255)
                                                                                                                                                                                                                                                 agGTGGCCGTaacctgcaggatttctatcaggccgggtttatttactccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcaaccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgcgggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccacttctggcgtcggcaacgtcacctcagga  <  1:140138‑M1/250‑241 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                
GGAAGCAATGTTACATAACGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTTTGGTAATAAAACAATAAATCCTGAAGGAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTGATTAATTTTATCGGTCAGCATCGTATTGAACGTTTTGCTCAACGTTGCGCCGGTAACCCTGTTTCCCGTTAC  >  NC_000913/2825545‑2826035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: