Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,228,2780GC31.2% 75.2 / 12.0 49intergenic (‑1008/‑704)yohF/yohPputative oxidoreductase YohF/putative membrane protein YohP
Reads supporting (aligned to +/- strand):  ref base G (18/15);  new base C (9/6);  total (27/22)
Fisher's exact test for biased strand distribution p-value = 7.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GGGTTTTGCTGGCATTAATATCGGTTTCCACACCTTCAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTCAGCCACCTGCATATCCGGTGC  >  NC_000913/2228030‑2228528
                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                             
gggTTTTGCTGGCATTAATATCGGTTTCCACACCTTCAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGcc                                                                                                                                                                                                                                                             <  1:82310/251‑1 (MQ=255)
           gCATTAATTTCGGTGTCCGCTCCTTCAATTTAAGAAGTAATCCCGTTCTGATATAGCTGGAGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGAAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTcc                                                                                                                                                                                                                                                  <  2:260299/251‑1 (MQ=255)
           gCATTAATATCGGTTTCCACCCCTTCAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTcc                                                                                                                                                                                                                                                  <  1:264833/251‑1 (MQ=255)
             aTTAATATCGGTTTCCACACCTTCAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATT‑GCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGGTT‑GGTCGCGATCCCCC‑GCCC‑GTGCTTTAACCCTACCC‑AGGCGGGG‑AG‑GAA‑CCCCCCCCCGCCTCTTTccccc                                                                                                                                                                                                                                               >  1:598943/1‑250 (MQ=255)
               tAATATCGGTTTCCACACCTTCAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCa                                                                                                                                                                                                                                               <  1:410251/250‑1 (MQ=255)
                   atCGGTTTCCACACCTTCAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGGTT‑GCTCGCCTTCCGCC‑CCCCCTTCCTTTAACC‑CACCC‑AGGCGGGC‑AG‑TAAACCCCCCCCCGATCCTTCccccccatt                                                                                                                                                                                                                                           >  1:161267/1‑246 (MQ=255)
                    tCGGTTTCCCCACCTTCAACTGAAGAAGTACTCCCGTTCTGATATAGCCGGCGATCGGTCGCGATAATGGTGTTCTTCTCTTTTTCTATTTTCTGCAA‑GACCGTGTTTATC‑GCCGCCTGGGTTT‑GCCACCCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAC‑CCTCCGCCCGATTCTTTCCCCAGatat                                                                                                                                                                                                                                          <  2:361613/250‑1 (MQ=255)
                       gTTTCCACACCTTCAACGGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCgag                                                                                                                                                                                                                                      <  2:175867/251‑1 (MQ=255)
                           ccACACCTGCAACTGAAGAAGTAATCCCGTCCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCGCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCGGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑TTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑Tg                                                                                                                                                                                                                                  <  2:274595/250‑1 (MQ=255)
                              cacCTTCAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAg                                                                                                                                                                                                                              <  1:471775/251‑1 (MQ=255)
                                   tCAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCCCGGGCGGCCGAG‑‑AA‑CC‑CCCCCCCCTTCTTTTCCCAGATATCGAGG‑TGCCAGccccc                                                                                                                                                                                                                         >  1:275753/1‑249 (MQ=255)
                                    cAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGAGCGGTCGCGATAATGGTGTTCTGCTCTTTTTTTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GGAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGTTTCTTTCGCCAGATATCGAGA‑TGCCAGCccgcc                                                                                                                                                                                                                        <  1:512816/251‑1 (MQ=255)
                                                 aaTCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGGTT‑GCTCGCGTTCCCCC‑CCCC‑CGGCTTTTACCCTACCC‑CGGCGGGG‑AGGTAA‑C‑TCCCCCCGCTTCTTTCCCCCGATATCGCGA‑TTCCACCCCCCCCTTTAGCCaaaa                                                                                                                                                                                                            >  1:618662/1‑250 (MQ=255)
                                                    cccGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑TCTCGCGTTCCGCC‑GCCC‑CGGGTTTTACCCTACCC‑AGGCGGGG‑AG‑GAA‑CCTCCGCCCGATTTTTTTCCCAGATAACGAGA‑TACCAGCCCGCCGGTaaacccaaaatac                                                                                                                                                                                                        >  1:525097/1‑240 (MQ=255)
                                                       gTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑TCCCGCGGTTCGCC‑GCCC‑GTGGTTTAACCGTACCC‑AGGCGGGG‑AG‑TGA‑ACTCCGCCCGATTCTTTTCCCCGATATCGAGA‑TGCCCACCCCCCGGTAAGCCaaaaataacgt                                                                                                                                                                                                     >  1:503889/1‑244 (MQ=255)
                                                            gATAGAGCTGGCGTTGGGTCGCGATAATGGTGTTCTGTTCTTTTTCTTTTTGCTGAAA‑GCCCTTGTTTACC‑GCCGCGTGGTTTT‑GCCACTCCCATTACAGGCGGGCTACGCTGCCAGCCA‑GAAATGG‑GGGGTTTT‑GCTCGCGTTCCCCC‑GTCC‑GTGTTTTACCCGTCCCC‑AGGGGGGC‑GG‑GAA‑CCCCCTCCCGAGTCTTCCCCCAGATACCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGgtg                                                                                                                                                                                                <  1:502962/251‑1 (MQ=255)
                                                                 aGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑TCTCTCGTTCCCCC‑GCCC‑CGGCTTTAACCCCACCC‑AAGCGGGC‑CA‑TAA‑ACTCCGCCCCTTTTTTTCCCCCGATAACTAGA‑AGTCAGCCCCCCGTTTACCCAAAAATACCGGTgggtgaccc                                                                                                                                                                                           >  1:629783/1‑244 (MQ=255)
                                                                          tCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑TCTCGCGTTCCCCC‑GCCC‑CCGCTTTTACCCTACCC‑CGGCGGGG‑AG‑TAA‑CCCCCCCCCGGTTTTTTTCCCCGATATCGGGA‑TGCCCGCCCCCCGTTTAACCCAAAGTACCGTTTgtgttaccccggcccgg                                                                                                                                                                                  >  1:455638/1‑238 (MQ=255)
                                                                           gggTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GCCCGTGTTTAAC‑GCCGCCGGGTTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGTTTTACCCGTCCCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTCCCCCAGATACCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTc                                                                                                                                                                               <  1:42680/250‑1 (MQ=255)
                                                                                    tatggttgtTCTGCTCTTTTTCTATTGGC‑GCAAAGCCCGTGTTAACC‑GCCGCTGGGGTTC‑CCCACTCCAAGTATTGGCGGCTTACGCTCCCAGCCA‑GTAATTG‑GCGGTTTT‑GCCCGCGTTCCGCC‑GCCC‑GGCCTTTACCCGTACCC‑AGGCGGGT‑AG‑TAC‑CCCCCGCCCGTTTCTTTCCCCAAATACCGGGA‑GGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGc                                                                                                                                                                       <  1:454606/244‑1 (MQ=255)
                                                                                           gttcggttctTTTTCTATTTGCTGCAA‑GACCGTGTTTACC‑GCCGCCTGGGTTT‑GCCCCTCCAAGAACAGGCGGGCTCCCCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCCCC‑GCCC‑GTGCTTTAACCGTACCC‑GGGCGGGA‑AG‑TAC‑CCCCCCCCCGATGCTTCCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGAt                                                                                                                                                               <  1:353598/244‑1 (MQ=255)
                                                                                           gtTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGGTT‑GCTCGCGTTCCGCC‑CCCC‑GGGCTTTAACCGTACCC‑AAGCGGGC‑AG‑TAA‑CCTCCCCCCGGTTCTTTTCCCAGATATCCAGA‑TGCCAACCCCCCGGTTAGCCAAAACGACCATTGGTGTACCCAC‑GGGC‑GGGCGTACCTCCGGcccggg                                                                                                                                                               >  1:259551/1‑247 (MQ=255)
                                                                                                      tttCTATTGGCCGCAA‑GCCCGTTTTTAAC‑CCCGCCTGGTTTT‑GCCCCTCCCAGTAAGGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCCCC‑GCCC‑GTTCTTTAACCGTCCCC‑AGGCGGAC‑AG‑TAC‑CCCCCCCCCGATTCTTTCCCCATATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGc                                                                                                                                                     <  1:297403/250‑1 (MQ=255)
                                                                                                                         cccggtTTAACCGCCGCGTGGTTTT‑GCCTCCCCCAGTCCAGGCGGTCCACGCTCCCACCCA‑GCAGTGG‑GCGGGTTT‑GCTCGCTTTCCGCC‑GCCC‑GTGCTTTAACCGTCCCC‑AGGCGGAT‑AG‑TAC‑CCCCCGCCCGATTCTTTCCCCAGATAGCGAGA‑TGCCCGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGcc                                                                                                                                   <  1:295350/247‑1 (MQ=255)
                                                                                                                                acaC‑GCCGGCTGGGTTT‑GCCCCGCCCAGTACAGGCGGGCTACGTTGCCGGCAA‑GCAATTG‑GCGGGTTT‑GCACGCGTCCCGCC‑GCCG‑GTGCTTTAACCGTACCA‑GGGCGGGA‑AG‑TAA‑CCCCCGCCCGATTCTGTCCCAAGATAGCGTGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGcc                                                                                                                            <  1:570142/248‑1 (MQ=255)
                                                                                                                                 aaC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGGACCC‑CGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTTAGCCAAAAGTACCGTTGGTGTACC‑AC‑CGGCCGGTCGTACCTTCGGCCCGATCGGTTAGAGCCAACGGGCCCCTTTAGCCCTCTGcccg                                                                                                                          >  1:53696/1‑249 (MQ=255)
                                                                                                                                  acgcgtcgcTGGGTTTTGCCACTCCGAGAGCAGGCGGGCTTCTCGGCCAGCCA‑GC‑‑TTGTGCGGGTTTTGCTTG‑GTTCCGCCCGCCG‑GGTCTTTACCCGCACCC‑GGGGGGGC‑A‑‑TTA‑CCTCCCCCCGTTTTTTTCCCCAATTATAGGGAATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCg                                                                                                                           <  2:4529/243‑1 (MQ=255)
                                                                                                                                  aC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑CCCC‑GCGCTTTAAACGTACCC‑AGGCGGGC‑AG‑CAA‑CCTCCCCCCGATTCTTTCCCCCGAAATCGAGA‑TGCCAACCCCCCCTTAAGCCAAAAAGACCGTTTGTGTACC‑ACCGGGCCGG‑CGGCCCTGCGGGCGGGTCGTTCAGAGAAAACCGCCCCCTTAAGCCTTCTGCCgcc                                                                                                                         >  1:326885/1‑249 (MQ=255)
                                                                                                                                       cgccTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGGTT‑TCTCGCCGTCCCCC‑GCCC‑GTGCGTTAACCCCACCC‑ACGCGGGC‑CG‑TAA‑CCCCCCCCCCGTTCTTTTCCCAGATATCGGGA‑ATCCAGCCCCCCGGTAAACCAAAAACACCCTTGGGGGTCC‑AC‑GGGCCCGTCGGACCTGCGGCCGGGTCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTTCCGagcttt                                                                                                                     >  1:245432/1‑246 (MQ=255)
                                                                                                                                         ccTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GGGCTTTAACCGTACCC‑AAGCGGGC‑AG‑GAA‑ACTCCCCCCCGTTCTTTTCCCAGATATCGAGA‑TGCCCGCCCCCCGTTAAACCAAAAGTACCGTTGGTGTAAC‑AC‑CGGCCCGTCGTACCTTCGGCCGGATCGGTTAGAGCAAAAGGCCCCCTTAAGCCTTCTGCCGACAttttt                                                                                                                   >  1:338049/1‑251 (MQ=255)
                                                                                                                                           cgggtttttccccTCCAAGTACAGGCGGTCTCCGCGGCCA‑CCATGCAATTG‑GCGGTTTT‑GCTCGCGTTCCCCC‑GCCC‑GTTCTTTAACCGTCCCC‑AGGCGGGC‑AG‑TAC‑CCCCCGCCCGATTCTTCCCCAAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACAtttttt                                                                                                                  <  1:241247/239‑1 (MQ=255)
                                                                                                                                                                cAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTAACGTTGGTGTACC‑AC‑GGGCCGGGCGTACCTGCGGCCGGATCGGTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGaa                                                                                              >  1:597079/1‑250 (MQ=255)
                                                                                                                                                                    cGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGGACC‑AC‑GGGCCGGTCGGACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTc                                                                                         >  1:384338/1‑251 (MQ=255)
                                                                                                                                                                                                  gggTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACt                                                             >  1:452493/1‑251 (MQ=255)
                                                                                                                                                                                                   ggTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTg                                                            >  2:236186/1‑251 (MQ=255)
                                                                                                                                                                                                      tt‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCt                                                         >  1:587910/1‑251 (MQ=255)
                                                                                                                                                                                                         cctcgtgtcccgcc‑cCCC‑GTGCTTAACCCGTCCCC‑AGGCGGGC‑AG‑ACC‑CCCCCCCCCGTTTCTTCCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTc                                                       <  1:96597/242‑1 (MQ=255)
                                                                                                                                                                                                               gTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGCAAAGTCGATCTGCGGACCATCCTGAGTGGCAAATGCCTTCGCCTgg                                                 >  1:315144/1‑251 (MQ=255)
                                                                                                                                                                                                               gTTCCGCC‑GCCC‑GTGCTTTAAACGTACCC‑AGACGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTCCCGTTGGTGTACC‑AC‑AGACCGGGAGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATAAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCTGAAAAGTCGATCTGCGGGCCATCCTGAGTGGCAACTGCCTTCGCCTgg                                                 >  2:281474/1‑251 (MQ=255)
                                                                                                                                                                                                                ttCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGGCATTTTTTGCCGCTCCATATCCGCCGCAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTggg                                                >  2:310664/1‑251 (MQ=255)
                                                                                                                                                                                                                    gcc‑gccC‑GTGTTTTAACCGTCCCC‑AGGCGGGA‑AG‑TAC‑CCCCCGCCCGATTCTTCCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACt                                                             <  1:8533/234‑1 (MQ=255)
                                                                                                                                                                                                                    gcc‑gccC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACt                                                             >  2:8533/1‑234 (MQ=255)
                                                                                                                                                                                                                     cc‑gccC‑GTGTTTTACCCGTCCCC‑AGGCGGGC‑AG‑TAA‑CCCCCCCCCGTTTCTTCCCCCAGATACCAAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCa                                           <  1:182788/251‑1 (MQ=255)
                                                                                                                                                                                                                       ggccC‑GTGCTTTAACCGTACCC‑AGGCGGGA‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCTAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCGGCGGCCGGATCGTTCAGAGCAAACCGCCCCATTAAGCCTTCTCCCGACATTTTTTGACTCTCCATATCCGCCAAAAAGACGAACTGCGGCCCATCCTGAGTGGCCACCGACTTCGCCTGGGcgtc                                            >  2:32526/2‑246 (MQ=255)
                                                                                                                                                                                                                                 tttAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGa                                  >  2:461420/1‑250 (MQ=255)
                                                                                                                                                                                                                                    tttacccttcccagggggggaataca‑CCTCCCCCCTATTGTTTCCCCAAATACGGAGA‑TCCCCGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGa                                  <  2:597079/225‑1 (MQ=255)
                                                                                                                                                                                                                                                  cGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTCAGCCAc                 >  1:225862/1‑251 (MQ=255)
                                                                                                                                                                                                                                                               ccTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCAAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTCAGCCACCTGCATATcc       >  1:598163/1‑251 (MQ=255)
                                                                                                                                                                                                                                                                   cGCCCGATTCTTTCCCCAGATATCGAGA‑TGCAAGCCCGCCGTTACGCCAAAAGCACCGTTGGTGTACA‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCACATTACGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGACTGCGCTGTTCAGCCACCTTCatctcagggg   >  2:558405/1‑243 (MQ=255)
                                                                                                                                                                                                                                                                    gCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTCAGCCACCTGCATATCCGGTGc  >  1:611363/1‑251 (MQ=255)
                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                             
GGGTTTTGCTGGCATTAATATCGGTTTCCACACCTTCAACTGAAGAAGTAATCCCGTTCTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAA‑GACCGTGTTTAAC‑GCCGCCTGGGTTT‑GCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCA‑GCAATTG‑GCGGGTTT‑GCTCGCGTTCCGCC‑GCCC‑GTGCTTTAACCGTACCC‑AGGCGGGC‑AG‑TAA‑CCTCCGCCCGATTCTTTCCCCAGATATCGAGA‑TGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACC‑AC‑GGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTCAGCCACCTGCATATCCGGTGC  >  NC_000913/2228030‑2228528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑