| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,014,028 | 0 | A | G | 26.9% | 145.7 / 14.8 | 67 | D257G (GAT→GGT) | pqiB | intermembrane transport protein PqiB |
| Reads supporting (aligned to +/- strand): ref base A (10/39); new base G (17/1); total (27/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.65e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCGGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTGAT > NC_000913/1013781‑1014274 | ccGGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGAtt < 1:404831/250‑1 (MQ=255) gCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGGACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATTTGCCTG‑AAGGTCT‑GGATTTAGGGc < 2:28173/251‑1 (MQ=255) tGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAGGCTTT‑ATGTGGCGG‑AAGGTCT‑GGGTTTAGGGc > 1:513645/1‑249 (MQ=255) ccGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCTCCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑Ag < 2:516625/251‑1 (MQ=255) ccGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑G‑CAG‑CTTTTATGTGCCGG‑GAGGGCT‑GGGTTTTGGGCAGcccg > 1:449503/1‑249 (MQ=255) cGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGt < 1:431301/251‑1 (MQ=255) gTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTg < 1:518249/251‑1 (MQ=255) ggCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGCCGTCAGCAGTGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTTATGTGCCGG‑AAGTTCT‑GGATTTAGTGCCGCC‑AGTGGc < 2:607475/251‑1 (MQ=255) tATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTTATGTGGCGG‑GAGGGCT‑GGGtttttgggagccagggggacc > 1:474126/1‑233 (MQ=255) aGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAg < 1:515914/251‑1 (MQ=255) tCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCtt < 1:554488/250‑1 (MQ=255) ccAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTat < 1:601095/251‑1 (MQ=255) aCCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑G‑GAG‑CTTTGATGTGCCGG‑GAGGGCT‑GGGTTTAGGGGAGCC‑CGTGGCCCCGGAAAAAGCTTTCG‑TTTTTTatgttg > 1:460807/1‑247 (MQ=255) cGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCag < 2:579259/250‑1 (MQ=255) acaAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGAGACCAACAATGTTCGCTTCTGGACAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑GGCA‑‑CTTTTCTGTGGCGG‑GAGGGCT‑GGAGTTATGGCAGAC‑GAAGGCACCGGAAACAGCCTTTG‑TTTTGTATTGTGTTCAGAagagg > 1:199472/1‑249 (MQ=255) aaaaaCGCAATCGCAGCTATCAACTGTTCAGCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGTGTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CGTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑GTTTGTATGATGATCAGAAGAGCA‑tt < 2:19088/251‑1 (MQ=255) aaaaCGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTT‑T‑TCG‑CTTTGTTGTGCCGG‑GAGGCCT‑GGGTTTTGGGCAGCC‑CGGGGCCACGCAAACAGCTTTCG‑TTTTTTATGATGATGAGAAGAGAA‑ttt > 1:42113/1‑250 (MQ=255) aaaaCGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTc < 1:196171/251‑1 (MQ=255) cGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAA‑CCTTGTTGGGCCGG‑GAGGGCT‑GGATTTTGGGGAGCC‑AGTGGCACCGCAAACAGCGTTCG‑TTTTGTTTGATGATCAGAAGAGCA‑TTTAggg > 1:472032/1‑250 (MQ=255) cGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGG‑T‑CAG‑CTTTGATGTACCGG‑AAGGGCT‑TGGTTTTGGGGAGCG‑AGGAGCACCGCAAACAGATTTCG‑TTTTTTattatgtttagacacgcaatcacgg > 2:335411/1‑232 (MQ=255) atatCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑GAGGGCT‑GGATTTTGGGCAGCC‑AGTGGCACCGAAAAAAACTTTTG‑TTTTGTTTGATGATCAGAAGAGCA‑TTCAGGATT‑cc > 1:77078/1‑250 (MQ=255) cAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGAG‑T‑TAG‑CTTTGATTTGCCGG‑GAAGTCT‑GGGTTTTTGGGAGCC‑CGTGGCACCGGAAAAAGCTTTCG‑TTTTGTGTGATTATCAGAAAAGCA‑TTCAGGGTT‑CGTTGt > 1:595499/1‑251 (MQ=255) tGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGGGAGGGGTT‑GAATTTTGGG‑AGCC‑AGGGGCACCGAAAACAACTTTCT‑TTTTTTATGATGATCAGAAAAACA‑TACAGGATT‑CTATGTAAAACGATcac > 1:468604/1‑251 (MQ=255) caATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACAGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGAtt < 1:143783/251‑1 (MQ=255) aCCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGa < 1:78904/251‑1 (MQ=255) ccTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑G‑CCG‑CGTTGTTTTTCCGG‑AAGGGGT‑GGGTTTAAGGCAGGC‑AGGGGGAACGGAAAAAGATTTCGGTTTTGT‑TGGTGGTCAGGAGAGCAATGCAG‑ATT‑TGTTGTGAACCGAACACATTGATTATCTggt > 2:311908/1‑249 (MQ=255) tATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGt < 1:28460/250‑1 (MQ=255) tATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGt < 2:449503/250‑1 (MQ=255) aCCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCttt < 2:207328/251‑1 (MQ=255) ccGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑GAGGTGT‑GGATTTAGGGCAGCC‑AGTGGCACCGGAAAAAGCTTTCG‑TTTTGTATGATGATCAGAAGAGGA‑TTCAGGATT‑CGTTGTAAACCGATCCAATTGATTATTTGATGTTCtttt > 1:92946/1‑250 (MQ=255) cGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTTATGTGCCGG‑GAGGGCT‑GGGTTTTGGGCAGCC‑AGTGGGACCGAAAAAAGCTTTTG‑TTTTTTATGATGATCAGAAGAGCA‑TTCAGGGTT‑CGTTGTACACCGATCACATTTATTATCTTTTGTTCtttt > 1:282842/1‑249 (MQ=255) gACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTaaa < 1:324467/251‑1 (MQ=255) gACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGGGT‑C‑G‑CCTTGATGTGTCGG‑GGGGTCT‑GGGGTTTGGGCAGCC‑CGGGGGGCCGCAAAAAGCCTTCG‑TTTTTTATTATGAGCAGAAGAGAA‑TTCAGGATT‑CTTTGTACACCCGTCACAATGTTTATTTGATGtttttttt > 2:365666/1‑248 (MQ=255) gTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGAGGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTAGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTGCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTc < 2:286871/251‑1 (MQ=255) gACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAA‑CCTTGATTTGCCGG‑GAGGACT‑GGGTTTAGGGGAGAC‑AGGGGGAACGAAAAAAGCTTTCG‑TTTTTTTTGAGGATCAGAAGAGCA‑TTTTGGATT‑TGTTGTTCACCGATCACATTGATTTTCTggttgtttttaaaaaattgg > 1:183988/1‑232 (MQ=255) ccAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTTATTATCTGATGTTCTGTAAAGATTCGGTa < 2:194643/251‑1 (MQ=255) aTGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGt < 2:595499/251‑1 (MQ=255) aTGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGG‑T‑CCA‑CTTTGCTGTTTCGG‑GAGGCCTTGGGTTT‑GGGCAGCCCGGGGGAACCGAAA‑CAACTTTCG‑TTTTTTATGATGATCAGAAGAGCA‑TTCAGGATTTCTTTTTA‑AACGATCTCATTCGTTATCTGGTGTTCTTTTAAGATTCgggatgtggt > 1:67454/1‑243 (MQ=255) cgcgtCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGAGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCa < 1:78376/247‑1 (MQ=255) tGATCTGCCGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGt < 2:474126/250‑1 (MQ=255) gTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGTGTATTCg < 2:625547/246‑1 (MQ=255) gTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑A‑CAG‑CTTTGATGTGGCGG‑AAAGGGT‑GGGTTTAGGGCAGCC‑CGGGGCACCCAAAACAGCTTTTG‑TTTTTTATGATGATCAGAAAAGCA‑TTCAGGGTT‑CGTTGTACACCGATCACATTGATTATCTTATGTTTTTTAAAGATTCGGTACGCGGGCTTCAACCCGGGGGTCCGGTAG‑AGTTCCGGGGGATTCg > 1:625547/1‑246 (MQ=255) cagcagGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGt < 1:295084/251‑1 (MQ=255) gcagGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGAGTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTAc < 2:460807/251‑1 (MQ=255) gggATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGt < 2:377510/251‑1 (MQ=255) gggATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGt < 2:393114/251‑1 (MQ=255) ggATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCTGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTa < 2:65509/251‑1 (MQ=255) aTGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTTATGTGCCGG‑GAGGGCT‑GGGTTTTAGGCAGCC‑AGTGGCACCGGAAACAGCCTTTG‑TTTTTTTTGATGATCAGAAGAGCA‑TTTAGGATT‑CGTTGTACACCCATCCCATTTTTTATCTTGTGTTTTTTTAAGATTTGGGACGCGGTCTGCCAACGGGGGCGCCGGGAG‑AGTTCCGGGGGATTCGCCTGGGGACCGTa > 1:148046/1‑249 (MQ=255) aTGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGGCGG‑AAGGTCT‑GGGGTTAGGGCAGCC‑AGGGGGACCGAAAACAACTTTTG‑TTTTTGATGATGATCCAAAGAGCA‑TTTAGGATT‑CGTTGGAAACCGTACACATTGATTATTTGATGTTTTTTAAAGATTCGGGACGCGGTCTGCAACCGGGGGCCCCGGGAG‑AGTTTCGGGGGATTTGCCTGGGGACCggaa > 1:314194/1‑247 (MQ=255) gtgtGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTTATTTTCCCG‑AAGGGCT‑GGGTTTATGGCAGCC‑CGTGGCACCCAAAAAAACCTTCG‑TTTTTTATGATGGTCAGAAGAGCA‑TTTAGGATT‑CGTTGTACACCGATCACATTGATTTTTTTGTGTTCTTTAAAGATTTGGTACGCGGGCTGCCACCGGGAGCCCCGGTAG‑AGGTCCGGGGGATTCGCCTTGGGACCGGAAGCaa > 1:218470/1‑250 (MQ=255) ggAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGc < 1:188346/251‑1 (MQ=255) gaTGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCAt < 1:53066/251‑1 (MQ=255) aTGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCAtt < 2:161790/251‑1 (MQ=255) ggCTCATTGACAACGCTGCTGAGTGGCGGTG‑C‑CAG‑GTTTGATGGGCCGGGAAGG‑CT‑CGGTTTTGGGCAGCC‑CGAGGCACCGGAAACAGCTTTCG‑TTTTTTATGGTTATCCGAAGAGCA‑ATCACGATT‑CGTTTGACACCCATCCCATTGATTATTTGGTGATCTTTTAAGATTCGGTACGCGGTCCGCCACCGGGGGCTCCGGTAGGAGTTC‑AGGGTATTTGCCTGGGGACCGTAAGCAAAGTGGCAttttt > 1:587035/1‑248 (MQ=255) cATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTgc < 1:539677/250‑1 (MQ=255) gCGGTG‑G‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGGTGTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACTGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCCTCGCGCGGAATATTCGTCAGACAttt < 2:564521/251‑1 (MQ=255) ggTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTa > 1:573700/1‑250 (MQ=255) t‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACgat > 1:422745/1‑251 (MQ=255) aG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGCCAGACATTTAACgatga < 1:118027/251‑1 (MQ=255) g‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACgatgat < 2:148046/251‑1 (MQ=255) tttGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGAtt > 1:350125/1‑250 (MQ=255) ttGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGATTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTAc > 1:446564/1‑251 (MQ=255) gATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTAcc < 1:255722/250‑1 (MQ=255) gCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCAACGAAAACAGCTTTCG‑TTTAGTATGATGATCAGAAGAGCA‑TTCAGGATA‑CGTTGTACACCGATCACATTGATTATATGAAGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGGGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATAACCGTAtac > 2:490355/1‑249 (MQ=255) ccGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTcc < 2:70811/251‑1 (MQ=255) gTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTT‑GCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTGa < 1:594282/251‑1 (MQ=255) ggATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTGAt < 1:207220/249‑1 (MQ=255) | CCGGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑T‑CAG‑CTTTGATGTGCCGG‑AAGGTCT‑GGATTTAGGGCAGCC‑AGTGGCACCGAAAACAGCTTTCG‑TTTTGTATGATGATCAGAAGAGCA‑TTCAGGATT‑CGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAG‑AGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTGAT > NC_000913/1013781‑1014274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |