Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,927,155 Δ12,222 bp [asnA][hsrA] [asnA], viaA, ravA, kup, rbsD, rbsA, rbsC, rbsB, rbsZ, rbsK, rbsR, [hsrA]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3927155 3939376 12222 60 [0] [0] 60 [asnA]–[hsrA] [asnA],viaA,ravA,kup,rbsD,rbsA,rbsC,rbsB,rbsZ,rbsK,rbsR,[hsrA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39271540 (0.000)60 (0.780) 59/494 0.1 100% intergenic (‑151/‑1) asnC/asnA DNA‑binding transcriptional dual regulator AsnC/asparagine synthetase A
?NC_000913 3939377 = 0 (0.000)coding (1236/1428 nt) hsrA putative transporter HsrA

GCCAAATTGTTTCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAAAGTGAAAGCTCTGCCTGATGCCCAGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAA  >  NC_000913/3926905‑3927403
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                         
gCCACATTGTTTCGCCAGTTCGGCGTAAGCGGTTCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTGTTGTTGCTTAATCATAAGCTACAGGACGCAGGAGTATAAAAAg                                                                                                                                                                                                                                                          <  2:317868‑M1/251‑2 (MQ=255)
           tCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCCTTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgaacttac                                                                                                                                                                                                                                               >  2:596055‑M1/1‑239 (MQ=255)
             gCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttac                                                                                                                                                                                                                                               >  1:218926‑M1/1‑237 (MQ=255)
                 gTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaac                                                                                                                                                                                                                                         <  2:203012‑M1/251‑19 (MQ=255)
                   tCGGCCTAACCGGTGCGCGCCATGCCCATTAATAATTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATCGGCTTTTCTTATGCGGATTGATGATTCATGCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATTTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGAAGTATAAAAAagacgcacttacagcaacgc                                                                                                                                                                                                                                       >  2:479383‑M1/1‑231 (MQ=255)
                               gTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcg                                                                                                                                                                                                                           <  1:388423‑M1/251‑33 (MQ=255)
                                  cgcgcATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcccttacagcaacgcctaaactaatcgac                                                                                                                                                                                                                         >  2:581055‑M1/1‑216 (MQ=255)
                                  cgcgcATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgac                                                                                                                                                                                                                         <  1:581055‑M1/250‑35 (MQ=255)
                                                 aaTGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgacc                                                                                                                                                                                                          <  1:195550‑M1/250‑50 (MQ=255)
                                                      ttCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgcc                                                                                                                                                                                                       >  2:61448‑M1/1‑196 (MQ=255)
                                                               gCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgtt                                                                                                                                                                                            <  1:328162‑M1/250‑64 (MQ=255)
                                                                  aCGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccg                                                                                                                                                                                        >  1:303189‑M1/1‑184 (MQ=255)
                                                                      tCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgc                                                                                                                                                                                    >  1:106762‑M1/1‑180 (MQ=255)
                                                                            ttGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGCGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcat                                                                                                                                                                              >  2:132083‑M1/1‑174 (MQ=255)
                                                                                  aTCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgcccgaacactgttaccgctgctggcattgtcat                                                                                                                                                                        >  2:600723‑M1/1‑168 (MQ=255)
                                                                                     aGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcgg                                                                                                                                                                     >  1:608960‑M1/1‑165 (MQ=255)
                                                                                         aaTTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgcgggcattgtcatcggtca                                                                                                                                                                  <  1:126064‑M1/250‑90 (MQ=255)
                                                                                          aTTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcaga                                                                                                                                                                <  1:61448‑M1/251‑92 (MQ=255)
                                                                                                    ggATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcccttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtg                                                                                                                                                      <  2:603735‑M1/251‑102 (MQ=255)
                                                                                                      aTTTTCTTATGCAGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgacagccagaacactgttacctctgctggcattgtcatcggtcagatcggcaagtgtg                                                                                                                                                    >  2:591396‑M1/1‑148 (MQ=255)
                                                                                                        tttCTTATGCGGATTGATGATTCCTTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgat                                                                                                                                                  >  1:35473‑M1/1‑146 (MQ=255)
                                                                                                            tgaggcgtattgatgatTTATTCTATTTTAGCCTTCTTCTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCCTAATCCTAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttccagcaacgcctaaactaatcgacagtcgcagcgtgcccgccagaacactgttaccgctgctggcattgtcatcggtcagaccggcaagtgtgatggt                                                                                                                                               <  2:75‑M1/242‑109 (MQ=255)
                                                                                                              aTGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtat                                                                                                                                             <  2:135587‑M1/250‑111 (MQ=255)
                                                                                                                 cGGATTGATGATTCATTCTCTTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGTCTTTTTATTGAATGCTTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGAAACAGGACGCAGGAGTATAAAAAggccgcacttacaacaacgcctaaactaatcgacagttgctgcgtgaccgccagaaaactgttaccgctgagggcattgtcatcggtcagatcggcaagtgtgatggcattcat                                                                                                                                         >  2:147193‑M1/1‑137 (MQ=255)
                                                                                                                  ggATTGATGATTCATTCTATTTTAGCCTTCTTTTGTAAGGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatgggattcatc                                                                                                                                        <  2:544057‑M1/251‑116 (MQ=255)
                                                                                                                   gATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcg                                                                                                                                       <  2:108727‑M1/251‑117 (MQ=255)
                                                                                                                    aTTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgc                                                                                                                                      >  1:284253‑M1/1‑134 (MQ=255)
                                                                                                                                    aTTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcga                                                                                                                       <  1:285308‑M1/250‑133 (MQ=255)
                                                                                                                                         aGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacaccgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagc                                                                                                                 <  2:294037‑M1/251‑139 (MQ=255)
                                                                                                                                          gCCTTCTTTTTTAATGAATCAAAAGTTAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagcc                                                                                                                <  1:52331‑M1/251‑140 (MQ=255)
                                                                                                                                            cttcttTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtctacatagccat                                                                                                              >  2:625445‑M1/1‑110 (MQ=255)
                                                                                                                                             ttcttTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGGTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactcatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagcaatc                                                                                                             >  2:10988‑M1/1‑109 (MQ=255)
                                                                                                                                                 tttttAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatcc                                                                                                            <  1:596055‑M1/248‑144 (MQ=255)
                                                                                                                                                     tAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatat                                                                                                     >  1:490874‑M1/1‑101 (MQ=255)
                                                                                                                                                        tGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataa                                                                                                   >  1:230626‑M1/1‑98 (MQ=255)
                                                                                                                                                           aTCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgccatagccatccctcatataaaca                                                                                                >  2:67505‑M1/1‑95 (MQ=255)
                                                                                                                                                             cAAAAGTGAGTTAGTCTTTTTATTGAATGATTATTGCATGTGTATCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaatctaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctgtcattgtcatcgttcagatcggcaagtgttatggtatttaacgcggtaaactgcgtcgacatagccatccctaatataaacaacg                                                                                             <  1:469372‑M1/251‑159 (MQ=255)
                                                                                                                                                                aaGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggc                                                                                           >  1:494318‑M1/1‑90 (MQ=255)
                                                                                                                                                                aaGTGAGTTAAGCTTTTTATTGAATGATTATTGGATGTGTGTCGGTTTGTGTTGCTTAATCATAAGCAACAGGACGCAGGGGTATAAAAAggccacacttacggcaacgcctaaactaatctacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcataggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagcaatccctaatataaacaacggca                                                                                          <  2:277934‑M1/251‑162 (MQ=255)
                                                                                                                                                                  gTGAGTTACGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAAAAGGACGCAGGAGTATAAAAAggccgcccttacagcaacgcccaaactaaacgacagttgctgcgcgaccgccagaacactgttaccgctgctggacttgtcatcggtcagatcggcaagtgtgatgggattcatcgcgttaaaatgcggcgacataaccatacctaatataaacaacggcac                                                                                         >  2:620193‑M1/1‑88 (MQ=255)
                                                                                                                                                                    gAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagat                                                                                      <  1:172776‑M1/251‑166 (MQ=255)
                                                                                                                                                                    gAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaaga                                                                                       <  1:255250‑M1/250‑165 (MQ=255)
                                                                                                                                                                     aGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagagagatggtattcatcgcggcaaactgcgtcgacatagccatccctaatataaacaacggca                                                                                          >  1:100630‑M1/1‑85 (MQ=255)
                                                                                                                                                                         aGGCTTTTTATTGAATGATTATAGCATGTGTGTCAGTTTTTGTTGCTTAATCATAAGCAACAGGCCGCAGGAGTATAAACAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgtaaccgctgctggcattgtcatcggtcagctcggcaagtgtgatggtattcatcgcggtacactgcgtcgccatagccatccctaatataaacaacggccatatcagcc                                                                                 >  2:447436‑M1/1‑81 (MQ=255)
                                                                                                                                                                                            tattGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctgg                                                              >  1:151489‑M1/1‑62 (MQ=255)
                                                                                                                                                                                              ttGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatacctaatataaacaacggcaagctcagcatccatatagccattgctggtg                                                            >  2:611976‑M1/1‑60 (MQ=255)
                                                                                                                                                                                                gCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatctagccattgctggtgat                                                          <  1:132083‑M1/251‑194 (MQ=255)
                                                                                                                                                                                                          cGGTTTTTGGTGCATAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaagcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgatttcaaagag                                                 <  1:631407‑M1/250‑203 (MQ=255)
                                                                                                                                                                                                            gTTTTTGTTGCTTAAGCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaagcgacagttgctgcgtgaccgccagaacactgtttccgctgctggcattggcatcggtcagatcggcaagtgtgatggtatgcatcgcggtaaactgcgtcgacatagccttccctaatataaacaacggcaagatcagcagccatatagccattgctggtgattgcaaagagaac                                              <  1:479383‑M1/251‑206 (MQ=255)
                                                                                                                                                                                                              ttttGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgttaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaact                                             <  2:522328‑M1/250‑207 (MQ=255)
                                                                                                                                                                                                              ttttGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagaaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggacagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactg                                            >  1:471850‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                               tttGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactg                                            <  1:233172‑M1/250‑208 (MQ=255)
                                                                                                                                                                                                                  gttgCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagagctgagcg                                        <  1:281872‑M1/251‑212 (MQ=255)
                                                                                                                                                                                                                          aTCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattag                                <  1:228080‑M1/251‑220 (MQ=255)
                                                                                                                                                                                                                                                aGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaataatcaccgtgatcccc          <  2:184626‑M1/251‑242 (MQ=255)
                                                                                                                                                                                                                                                 gTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaataatcaccgtgatcccc          >  2:62269‑M1/1‑9 (MQ=255)
                                                                                                                                                                                                                                                    taAAAAggccgcacttaaagcaacgccaaaactaatcgacagttgatgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggaattcatcgcggtaaactgcgtcgacatagccatacctaatataaacaacggcaagataagcttccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaataatcaccgtgatccccact       >  2:204062‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                                        aaggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaac                                                                                              >  1:93890‑M1/1‑2 (MQ=255)
                                                                                                                                                                                                                                                        aaggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaac                                                                                              <  2:93890‑M1/159‑158 (MQ=255)
                                                                                                                                                                                                                                                        aaggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaacgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaataatcaccgtgatccccactaacgt  >  1:578340‑M1/1‑2 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                         
GCCAAATTGTTTCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAAAGTGAAAGCTCTGCCTGATGCCCAGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAA  >  NC_000913/3926905‑3927403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: