| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 70 [0] | [0] 68 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 67 (0.870) | 63/494 | 0.1 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
AGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGC > NC_000913/2755908‑2756406 | aGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTcccc < 1:606381/251‑1 (MQ=255)aGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTcccc < 1:273423/251‑1 (MQ=255) ttCGGAGGCGGGTACACTTCCCGCCAGGTCCACCAATATGCGCCATCGGTGATTATCAGAGTCATGCGATGAAGTTCTAAGAGCTCGCACGGCACTAGACCTGCGGGCTTTTTTGTGCCCTCGATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCTAACCATTTAGTCCCGTTGATAGGCCCAGCGAGAAGCTCGTTTGTTTTCGTTGGGCCTAAACGCATGGAGACTccccgcgcaaaggaat < 2:541233/250‑13 (MQ=255) cGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGCGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGGAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTCACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaatgt > 2:70392‑M1/1‑236 (MQ=255) gACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagc < 1:567186‑M1/251‑18 (MQ=255) ccaccaAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGTGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattatt < 1:417757‑M1/249‑41 (MQ=255) caccaAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggc > 2:184189‑M1/1‑208 (MQ=255) ttCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGACCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCACATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCACCgcgcaaaggaattgagcggatgtatgattttgagattattggcggcggcat > 2:424873‑M1/1‑200 (MQ=255) gATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgt < 2:88368‑M1/211‑24 (MQ=255) gATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgt > 1:88368‑M1/1‑188 (MQ=255) aTTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcg > 1:456814‑M1/1‑187 (MQ=255) aCCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgacc < 1:403921‑M1/251‑68 (MQ=255) ccTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgt < 1:239150‑M1/250‑88 (MQ=255) aaGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAACTCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCCGGGCGACTCCCCgcgcacaggaattgagcggttgtatgattttgtgattattggcggcggcatcctcggcatgttgaccgcaatgcaactgcttgatgtctat > 2:525978‑M1/1‑160 (MQ=255) gagCCCGCACGGCGCAAGCCCTGCGGACTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattcatgactatcc > 1:516256‑M1/1‑158 (MQ=255) gCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgcaatgcaaccgattgatggttatcagg > 2:269081‑M1/1‑156 (MQ=255) cGCATGGCGAAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGCGACTCCCCgcgcaaagggattgagcggaagtatgattttgtgattattggcggcggcatcatcgccatgtcgaccgccatgcaacttattgatgtccacccggact > 1:281505‑M1/1‑153 (MQ=255) ggCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgcaatgcaactgattgatgtctatccggacgcccgc < 1:283800‑M1/251‑104 (MQ=255) gcAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcatt > 1:333982‑M1/1‑145 (MQ=255) gCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgt > 1:478342‑M1/1‑141 (MQ=255) ttGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagag < 2:62560‑M1/250‑125 (MQ=255) tgtgCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagt < 1:446359‑M1/250‑126 (MQ=255) aTTTGTCCCGCGAAGTCCGAAGAGAACGAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagctgatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgcttgaaaaagagtccgccccggcc < 2:23150‑M1/251‑137 (MQ=255) cccGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcac > 1:332913‑M1/1‑109 (MQ=255) gAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagaggccgccccggcctgtcaccagac > 1:127394‑M1/1‑104 (MQ=255) gTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacggg > 1:135495‑M1/1‑101 (MQ=255) tAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAATCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgcgattattggcggcggcatcataggcatggcgaccgccatgcgactgattgctgtctatccggcagcccgcatttcgttgatgggaaaagagtatgccccgggctgtcaccagaaggtccacacccgccgc > 2:17023‑M1/1‑88 (MQ=255) aaTTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcg < 1:426942‑M1/251‑165 (MQ=255) aaaTCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtga > 2:356954‑M1/1‑83 (MQ=255) cGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatg > 1:534872‑M1/1‑78 (MQ=255) aaCCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgcc < 1:431328‑M1/251‑176 (MQ=255) aCCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggctgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgcccc > 2:500576‑M1/1‑75 (MQ=255) aCCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgcccc < 1:500576‑M1/207‑133 (MQ=255) ccTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccgg > 1:326900‑M1/1‑74 (MQ=255) ttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACGCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggt < 1:245659‑M1/250‑181 (MQ=255) aGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtct > 1:565846‑M1/1‑68 (MQ=255) ggCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattatgggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctat < 1:346313‑M1/251‑185 (MQ=255) cccATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctatt > 1:202127‑M1/1‑65 (MQ=255) cccATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCACgcgcaaaggaattgagcggatgtatgattttgggattattggcggcggcatcatcggcatgtcgaccgccattcaaatggttgatgacaatccggacgcccgcattgcgtttatggaaaaagagtccgccccggcctgtcaccagacggtcccccaaagcggcgtgatccatgccggggtctattt > 2:583964‑M1/1‑65 (MQ=255) tGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggac > 1:337217‑M1/1‑60 (MQ=255) tGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggac < 2:337217‑M1/157‑98 (MQ=255) tGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAAAGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaaatgaatgatgtccatcaggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaaacgcggcgtgatccatgcaggggtatattacacgt > 1:191003‑M1/1‑60 (MQ=255) aGGCCCAACGAAAAGCTCTATTGTTTCCGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttttgattattggcggctgcatcatcggcatgtcgaccgccatgcaactgattgatttctctccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccg < 1:71292‑M1/250‑195 (MQ=255) gAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctga > 2:281122‑M1/1‑47 (MQ=255) aaaGCTCTATTGTTTACGTTGGGCCTAAACGCCGGGTGACTCCCCgcgcacaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgccactgattgatgtctatacggacgcccgcattgcgctgctggaaaaagagtccgccccggcctgtcaccacacgggccacaacagcggcgtgatccatgccggggtctattacacttccgggagcacgaagg > 2:560481‑M1/1‑45 (MQ=255) aGCTCTATTGTTTCCGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcaaccgccatgcaactgattgatgtctatccggccgcccgcattgcgttgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccctgccggggtctcttccacgtccggcagccttacggcc > 2:46203‑M1/1‑43 (MQ=255) aGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatggcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacaacggcgtgatccaggccgggggctattacccgtccggcagcctgaaggcg > 2:252007‑M1/1‑43 (MQ=255) gCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgc > 1:269496‑M1/1‑42 (MQ=255) ctctATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgc > 1:495094‑M1/1‑41 (MQ=255) ctATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagt > 1:448839‑M1/1‑39 (MQ=255) tGTTTGCGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgggcggatgtatgattttgtgattatgggcggcggcatcatcggcatgtcgaccgccatgcaactgatggatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccgtcctggcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagtttt < 1:525978‑M1/250‑216 (MQ=255) tGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcggtgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcaacccgaacgccccggtttg > 2:114537‑M1/1‑35 (MQ=255) tGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcaggtcgaccgccatgcacctgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagcccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagtttt < 2:333982‑M1/250‑216 (MQ=255) acttggggcctaaACCCAGGGAGACTCCCCgcgaaaagtaattgagcggaggtatgattttgtgtttattggggggggcatcttcggaatgtctaccgccaggcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggccggtcaccatacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctg < 2:436770‑M1/245‑221 (MQ=255) aCGTTGGTACTAAACGCAGGGAGACTCCCCgagcaaaggaattgagcggctgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgagttgctggaaaaatagaccgccccggcctttcaccagacgggccacaacagcggcgtggtccatgccggggtctcttacaagaccggcagcctgaaggcggcgttttgcctgg > 2:432874‑M1/1‑30 (MQ=255) gTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcg < 1:424873‑M1/251‑224 (MQ=255) gTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcaggtttgcctggcg > 1:204165‑M1/1‑28 (MQ=255) ttGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgg > 1:528966‑M1/1‑27 (MQ=255) tggacctaaaCGCAGGGAGACTCCCCgcgcaaaggaatggagcggatgtatgattttgtgattattggcggcggcatcatcggcaggtcgtccgccatgcacctgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgg < 1:202820‑M1/246‑225 (MQ=255) ggggcCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggaggtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgcgggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcggg < 2:95928‑M1/250‑226 (MQ=255) gggCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcggg > 1:443044‑M1/1‑25 (MQ=255) ggCCTAAACGCAGGGAGACACCCCgcgcaaaggaatggagcggatgtatgattttgtgattattggcggcggcatcatcggcatgccgaccgccatgcaactgattgatgtctatccggactcccgcattgcgttgctgaaaaaagagtcctccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaa < 2:254160‑M1/251‑228 (MQ=255) gCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgcccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccctgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaa > 2:282171‑M1/1‑23 (MQ=255) aaCGCAGGGAGCTTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcg < 1:577480‑M1/251‑234 (MQ=255) aaCGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcg > 1:74910‑M1/1‑18 (MQ=255) gCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgcttgatgtctatccggacgcccgcattgcgttgctggaaaaagagcccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccc > 1:275705‑M1/1‑15 (MQ=255) gCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggccgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgcca < 1:546044‑M1/251‑237 (MQ=255) gagaCTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaa < 1:184189‑M1/251‑242 (MQ=255) agaCTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccctgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaa > 1:214702‑M1/1‑9 (MQ=255) cccgcgcaaaggaattgagcggatttttgattttgtgattattggcggcggcatcatcggcttgtcgaccgccatgcaactgattgatgtctatccggccgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaagcctttt < 1:502795‑M1/251‑249 (MQ=255) | AGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGC > NC_000913/2755908‑2756406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |