Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,101,395 Δ11,672 bp wbbLrfbB wbbL, insH7, wbbL, wbbK, wbbJ, wbbI, wbbH, glf, rfbX, rfbC, rfbA, rfbD, rfbB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2101395 2113066 11672 54 [0] [0] 55 wbbL–rfbB wbbL,insH7,wbbL,wbbK,wbbJ,wbbI,wbbH,glf,rfbX,rfbC,rfbA,rfbD,rfbB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 21013940 (0.000)54 (0.710) 49/490 0.3 100% intergenic (‑126/+2) gnd/wbbL 6‑phosphogluconate dehydrogenase, decarboxylating/interrupted rhamnosyltransferase WbbL
?NC_000913 2113067 = 0 (0.000)intergenic (‑6/+367) rfbB/galF dTDP‑glucose 4,6‑dehydratase 1/UTP:glucose‑1‑phosphate uridylyltransferase, low activity

CCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATATTACGGGTGAAAAACTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAG  >  NC_000913/2101151‑2101639
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                     
ccGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattcc                                                                                                                                                                                                                                                <  1:440884‑M1/251‑8 (MQ=255)
ccGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattcc                                                                                                                                                                                                                                                <  1:254856‑M1/251‑8 (MQ=255)
ccGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattcc                                                                                                                                                                                                                                                >  1:388395‑M1/1‑244 (MQ=255)
   tcttctCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccat                                                                                                                                                                                                                                              >  1:461796‑M1/1‑241 (MQ=255)
    cttctCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGATTATATGCTTACGGCTTTATttattccatat                                                                                                                                                                                                                                            >  2:55915‑M1/1‑240 (MQ=255)
              gAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagag                                                                                                                                                                                                                                  <  2:191575‑M1/251‑22 (MQ=255)
                 cGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGGTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATTCTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTGATTAAAGTATAAATAGCTTATCCATGCTTATATGCGTACGGCTTTAGttattccatattacttcagagcat                                                                                                                                                                                                                               <  2:219759‑M1/251‑25 (MQ=255)
                   gTTGAAAATAGAGACGGTATAACCACGGCTTTAGATGTTGAGCGCAAGGTTGCGTCCTATCACTGCCATACCGAATACGCCGAACTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTGGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttataccctattacttcagagcatgt                                                                                                                                                                                                                             >  2:420271‑M1/1‑225 (MQ=255)
                                  ggTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggc                                                                                                                                                                                                              >  1:196184‑M1/1‑210 (MQ=255)
                                    tataACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctc                                                                                                                                                                                                            >  1:17676‑M1/1‑208 (MQ=255)
                                       aaCCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctc                                                                                                                                                                                                          >  1:54344‑M1/1‑205 (MQ=255)
                                              gCTTTCGATGTTGAGCGCAAGAATGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATCCTCCTGTCAGGTGGGCTCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGCATACAAAGTACTTATTAAAGTATAACTAGCTTATCCATGCTTATATGCTTACGTCTTTATttattccatattacttcagagcatgctgtgacataagcggctctcagtttgat                                                                                                                                                                                                  >  2:488411‑M1/1‑198 (MQ=255)
                                               cTTTCGATGTTGAGCGCAAGGTTGCGTACCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgatt                                                                                                                                                                                                 >  1:131191‑M1/1‑197 (MQ=255)
                                                       gTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagagg                                                                                                                                                                                         >  1:94884‑M1/1‑189 (MQ=255)
                                                           aGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtatt                                                                                                                                                                                     >  1:599599‑M1/1‑185 (MQ=255)
                                                                      gCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgct                                                                                                                                                                           >  2:118492‑M1/1‑174 (MQ=255)
                                                                          cccATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccg                                                                                                                                                                       <  1:141250‑M1/250‑81 (MQ=255)
                                                                                   gCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctt                                                                                                                                                             <  1:557379‑M1/251‑91 (MQ=255)
                                                                                    ccATACCGACTACGCCAATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGTCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgggaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggcttt                                                                                                                                                            <  2:292064‑M1/251‑92 (MQ=255)
                                                                                               aCGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctacc                                                                                                                                                   <  1:83396‑M1/249‑101 (MQ=255)
                                                                                               aCGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaat                                                                                                                                                                                                                     <  2:61491‑M1/183‑35 (MQ=255)
                                                                                               aCGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaat                                                                                                                                                                                                                     >  1:61491‑M1/1‑149 (MQ=255)
                                                                                                               tggacagtgcgtgctgctgtgcggtgtgatcaccgcgctgaatgctCGCGGCCTGGAATGTTCGCAAATAATGTTACAAAGTACTTAATAAATGTTAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcat                                                                                                                                   <  2:60200‑M1/227‑117 (MQ=255)
                                                                                                                         aTACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtg                                                                                                                       <  2:461796‑M1/251‑129 (MQ=255)
                                                                                                                           aCTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgac                                                                                                                     >  1:295662‑M1/1‑121 (MQ=255)
                                                                                                                                tGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgt                                                                                                                                       >  1:432328‑M1/1‑116 (MQ=255)
                                                                                                                                tGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgt                                                                                                                                       <  2:432328‑M1/228‑113 (MQ=255)
                                                                                                                                            tCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgc                                                                                                    >  2:158399‑M1/1‑104 (MQ=255)
                                                                                                                                                cgcgCTGAATGCTCGCGGCCTGGAATGTTCTCAAATAAGTTTCCAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTCTTATGTTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttccagctcccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgcta                                                                                                <  2:48573‑M1/251‑152 (MQ=255)
                                                                                                                                                       aaTGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccg                                                                                          >  2:589905‑M1/1‑93 (MQ=255)
                                                                                                                                                       aaTGCTCGCGGAATGGAAGGTGCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGTTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccga                                                                                         <  2:388395‑M1/251‑159 (MQ=255)
                                                                                                                                                                ggCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaa                                                                                <  1:628842‑M1/251‑168 (MQ=255)
                                                                                                                                                                     ggAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacg                                                                             <  1:589905‑M1/249‑171 (MQ=255)
                                                                                                                                                                          gTTCGCAAATAAGTATACAAATTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattccttcagagcatgctgtgaaataagcggctctcattttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattg                                                                      <  2:436388‑M1/251‑178 (MQ=255)
                                                                                                                                                                          gTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattg                                                                      <  1:461598‑M1/251‑178 (MQ=255)
                                                                                                                                                                                aaaTAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaagtgtcttac                                                                <  1:619014‑M1/251‑184 (MQ=255)
                                                                                                                                                                                  aTAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttacc                                                               >  2:574777‑M1/1‑66 (MQ=255)
                                                                                                                                                                                    aaGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaat                                                            >  1:7742‑M1/1‑64 (MQ=255)
                                                                                                                                                                                         ataCAAAGTACTTATTAAAGTATAAATATCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggatctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgtgacccactcgcgataaccccgaaaatttcacacgctaattggcttaccaatacgc                                                        >  2:298028‑M1/1‑60 (MQ=255)
                                                                                                                                                                                           aCAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctatcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctcattgtcttaccaatccgctc                                                      >  2:590049‑M1/1‑58 (MQ=255)
                                                                                                                                                                                            cAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccag                                                                                                                                                 >  1:141477‑M1/1‑57 (MQ=255)
                                                                                                                                                                                            cAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccag                                                                                                                                                 <  2:141477‑M1/159‑103 (MQ=255)
                                                                                                                                                                                                gTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttagtccatatttcttcagagcatgcggtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcacttcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaa                                                 <  2:389689‑M1/251‑199 (MQ=255)
                                                                                                                                                                                                      attaAAGTATCAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaagg                                           >  2:167497‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                      attaAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaagg                                           <  2:520597‑M1/251‑205 (MQ=255)
                                                                                                                                                                                                         aaaGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaa                                         >  1:227342‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                                         tATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactt                          <  1:21733‑M1/250‑222 (MQ=255)
                                                                                                                                                                                                                         gatCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctacagcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaatcgctacttgtcttaccaatccgctctgtaaacaaggaaaatcctggaaaacttt                         >  2:469115‑M1/2‑29 (MQ=255)
                                                                                                                                                                                                                               tGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgccgagagttacccactcgcgctaaacccgaaaaattcaaccgctaattgtcttaccaatccgctctggaaacaaggaaaatcatggaaaacttagaata                    >  2:614485‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                                        gattacGGCTTTATttattccatattacttcagagcatgctggtaataatgcgtctcccagttttattaatagaggtattaaggcaccctaccgaccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaatcgctaattgtcttaccaatccgctctggaaacaaggaaaagcctgtaaaactgtgaataaatccctact          <  2:453054‑M1/249‑238 (MQ=255)
                                                                                                                                                                                                                                         cTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactg         >  1:226873‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                            aCGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactgcta      <  1:602352‑M1/251‑242 (MQ=255)
                                                                                                                                                                                                                                              ggCTTTATttattccatattccttcagagcatgctgtgaaataagcggctcccagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactgctaac    <  1:55915‑M1/251‑244 (MQ=255)
                                                                                                                                                                                                                                                cTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactgctaactc  >  1:165938‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                     
CCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATATTACGGGTGAAAAACTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAG  >  NC_000913/2101151‑2101639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: