New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	84 (1.090)	76/492	0.0	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 2406787	0 (0.000)					intergenic (‑146/‑774)	lrhA/alaA	DNA‑binding transcriptional dual regulator LrhA/glutamate‑‑pyruvate aminotransferase AlaA

CAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTACCCCAAAAACC  >  NC_000913/2406539‑2407035                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                         caacGGCAGCTGCGGAAGCAAAAGTGTTCAGATCGGCAACAGAAACAAATGTTCTAAGCAGATCGGGGTCGAGGTTAATTAGCGGACGATTTTCACTTATCATATATTATCACTTACTAGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACCAGCCAGCAATTCCCTTTTTAATGTGCCTCCCTGGACGTTTCCTCCGGAACCCAGACGGAAGTAACAATGCATAAGCGTTCGAATAAAAAAGCgg                                                                                                                                                                                                                                                        >  2:231701/4‑250 (MQ=255)  aGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggt                                                                                                                                                                                                                                                       >  2:189507‑M2/1‑248 (MQ=255)     ggCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTTGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaat                                                                                                                                                                                                                                                    >  2:196564‑M2/1‑245 (MQ=255)     ggCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaat                                                                                                                                                                                                                                                    <  1:397003‑M2/251‑7 (MQ=255)            gCGGCAGCAAAAGGGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCGCTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACCAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCGCTAAAAAAGCggtaatgtctcc                                                                                                                                                                                                                                              >  2:7825‑M2/1‑238 (MQ=255)              ggCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGTTCATACTGAGCTGGTTAATGCTGTGCACACAAAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAGACTGCATATGAGTTGCACTAAAAAAGCggtaatgactccaac                                                                                                                                                                                                                                           <  2:478131‑M2/251‑16 (MQ=255)                  gcaAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttat                                                                                                                                                                                                                                       <  1:374684‑M2/251‑20 (MQ=255)                   caAAAGAGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgcctccaacttatt                                                                                                                                                                                                                                      <  2:464260‑M2/251‑21 (MQ=255)                    aaaaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattg                                                                                                                                                                                                                                     <  2:432355‑M2/251‑22 (MQ=255)                     aaaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGCGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattg                                                                                                                                                                                                                                     <  1:13558‑M2/250‑22 (MQ=255)                      aaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACGTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgat                                                                                                                                                                                                                                   >  1:464260‑M2/1‑228 (MQ=255)                                      aacagcaacaAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcag                                                                                                                                                                                                                   >  2:75279‑M2/1‑212 (MQ=255)                                      aacagcaacaAATGGTCTCAGCAGATCGAGGTCGAGGTTAATTATCTGACGATTTGCACTTATCATATATTATCACTTACTGGCGTCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGTCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATTCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcag                                                                                                                                                                                                                   >  2:304175‑M2/1‑212 (MQ=255)                                        cagcaacaAATGTTCTCAGCAGATCGAGGTCGAGGGTAATTATCGGACGATTTGCACTTATCATATATTATCAATTACTGGCGGCTCATACTGAGCTGGTTACTGCTGTGAACACAAACACAAGCGATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGCAAAAATGCATATGAGTGGCCCTAAAAAAGCggtaatgactccaacttgttgatagtgttttatgttc                                                                                                                                                                                                                     <  2:250289‑M2/247‑38 (MQ=255)                                                aaTGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACCTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCAGTTCTAATGTGCCTCCCTTGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGTGTTGCACTAAAAAAGCggtcatgaccccaacttattgctagtgttttatgttcagataatgcccg                                                                                                                                                                                                         >  2:339581‑M2/1‑202 (MQ=255)                                                   gTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                                                                                                                                                      <  1:255809‑M2/251‑53 (MQ=255)                                                         agcagATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                                                                                                                                                                                >  1:89793‑M2/1‑193 (MQ=255)                                                           cagATCGAGGTCGCGGTTAATTATCGGACGCTTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttttc                                                                                                                                                                                              <  2:205648‑M2/251‑61 (MQ=255)                                                             gATCGAGGTCGAGGTTAATTATCGGCCGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                                                                                                                                            <  1:446389‑M2/251‑63 (MQ=255)                                                              aTCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                                                                                                                                           <  1:506040‑M2/251‑64 (MQ=255)                                                                  aggtcgaggtTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTCATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACACGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCgtgaatgactccaacttattgatagtgttttttgttcagataatgcccgatgactttgtcatgcagc                                                                                                                                                                                       <  2:238289‑M2/251‑68 (MQ=255)                                                                      cgaggtTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                                                                                                                                                                    >  2:44664‑M2/1‑180 (MQ=255)                                                                          gtTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                                                                                                                                                                                <  1:134053‑M2/250‑75 (MQ=255)                                                                                    ggACGATTTGCACTTATCATATATTTTCACTTAATGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTACATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGCCGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgaatccaacttattgctagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                                                                                                                                     <  1:492330‑M2/251‑86 (MQ=255)                                                                                     gACGATGTGCACTAATCATATATTATCACTTACTGGCGGCTCCGACTTAGCTGGATAATGCTGTGCACACACAAACAAGCAAATCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAACTGCATATGAGTTGCACTAAAAAAGCggtactgactccaacttattgatagtgttttatgttcagataatgcccgctgactttgtcatgcagctcccacgattttgagaacg                                                                                                                                                                    <  2:359613‑M2/251‑87 (MQ=255)                                                                                       cGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                                                                                                                                  >  1:478131‑M2/1‑163 (MQ=255)                                                                                             gCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac                                                                                                                                                            <  2:524996‑M2/251‑95 (MQ=255)                                                                                                  tATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg                                                                                                                                                       <  1:85809‑M2/251‑100 (MQ=255)                                                                                                     cATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcc                                                                                                                                                    <  1:146130‑M2/251‑103 (MQ=255)                                                                                                          attatCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc                                                                                                                                               >  1:418869‑M2/1‑144 (MQ=255)                                                                                                             atCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCGATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                                                                                                                                            <  2:357094‑M2/251‑111 (MQ=255)                                                                                                              tCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTGAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc                                                                                                                                           <  1:269042‑M2/251‑112 (MQ=255)                                                                                                                acttactggagacccaacctgagctggttaatgctttGCACACCCAAACAAGCAATTCCATTTGTAATGTGAAACCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTCAAAACGCggtaatgaccccaacttattgattgtgtttaatgttcagataatgcccgctgactttgtcatgcggctccaccgattttgagaacgacagcgacttccgtcccagccgtgccc                                                                                                                                         <  2:125261‑M2/233‑114 (MQ=255)                                                                                                                 cTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgccgctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                                                                                                                                          <  2:31894‑M2/249‑113 (MQ=255)                                                                                                                   tACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggg                                                                                                                                      <  1:301963‑M2/251‑117 (MQ=255)                                                                                                                   tACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccag                                                                                                                                        >  2:526753‑M2/1‑135 (MQ=255)                                                                                                                    aCTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                                                                                                                                     <  1:322279‑M2/251‑118 (MQ=255)                                                                                                                      tGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                                                                                                                                   <  2:57858‑M2/251‑120 (MQ=255)                                                                                                                      tGGCGGCTCATACTGAGCTGGTTAATGCTGAGCACACACAAACACGCAATTCCATTTGTAATGTGCATCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAACTGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggggct                                                                                                                                   <  1:506446‑M2/251‑120 (MQ=255)                                                                                                                             tCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                                                                                                                              <  1:576013‑M2/249‑125 (MQ=255)                                                                                                                               aTACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat                                                                                                                          >  1:433483‑M2/1‑123 (MQ=255)                                                                                                                                     aGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattctgagaacgacagcgacttccgtcccagccgtgcaaggtgctgcctcagattcaggt                                                                                                                    <  2:344038‑M2/251‑135 (MQ=255)                                                                                                                                        gggtTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttat                                                                                                                 >  2:423729‑M2/2‑114 (MQ=255)                                                                                                                                            tAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgcc                                                                                                              >  2:397003‑M2/1‑110 (MQ=255)                                                                                                                                                   gtgCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATCTGAGTTGCACTAAAAAAGCgggaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctctgattcaggttatgccgctcaat                                                                                                       >  2:225790‑M2/1‑103 (MQ=255)                                                                                                                                                         acacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgc                                                                                                <  2:387902‑M2/251‑155 (MQ=255)                                                                                                                                                           acaaacaaGAAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACACGGCCGCAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagagacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgt                                                                                              <  2:317327‑M2/251‑157 (MQ=255)                                                                                                                                                            caaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttattttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgta                                                                                             >  1:499997‑M2/1‑94 (MQ=255)                                                                                                                                                             aaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtat                                                                                            <  2:421892‑M2/251‑159 (MQ=255)                                                                                                                                                              aacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtat                                                                                            <  1:162529‑M2/250‑159 (MQ=255)                                                                                                                                                              aacaaGCAATTCCAATTGTAATGTGCCTCCCTGGCAGTTTCATCCGGATCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttgtatgttcagataatgcccgatgactttgtcttgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggggctgcctcagatgcaggttatgccgctcatttcgctgcgtata                                                                                           >  2:521207‑M2/1‑92 (MQ=255)                                                                                                                                                                   gCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgct                                                                                      >  1:57858‑M2/1‑87 (MQ=255)                                                                                                                                                                    cAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcatataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagagtcaggttatgccgctcaattcgctgcgtatatcgctt                                                                                     >  2:181095‑M2/1‑86 (MQ=255)                                                                                                                                                                    cAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgctt                                                                                     >  1:432355‑M2/1‑86 (MQ=255)                                                                                                                                                                      aTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgc                                                                                   <  2:197568‑M2/251‑168 (MQ=255)                                                                                                                                                                        tCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgct                                                                                  >  1:524996‑M2/1‑82 (MQ=255)                                                                                                                                                                          cATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgat                                                                               >  1:64096‑M2/1‑80 (MQ=255)                                                                                                                                                                                 aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatctcgcttgctgattacgggc                                                                        <  2:556748‑M2/251‑179 (MQ=255)                                                                                                                                                                                 aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgc                                                                        <  2:442715‑M2/251‑179 (MQ=255)                                                                                                                                                                                 aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtg                                                                         >  2:434221‑M2/1‑73 (MQ=255)                                                                                                                                                                                     tgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGGAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcagtgccagatgcagcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagct                                                                    <  2:270739‑M2/251‑183 (MQ=255)                                                                                                                                                                                      gCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctt                                                                   >  1:74719‑M2/1‑68 (MQ=255)                                                                                                                                                                                            cTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttccctt                                                             <  2:572666‑M2/251‑190 (MQ=255)                                                                                                                                                                                              ggCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttatggatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttccctt                                                             >  2:246196‑M2/1‑60 (MQ=255)                                                                                                                                                                                                cAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcagg                                                         >  1:217532‑M2/1‑58 (MQ=255)                                                                                                                                                                                                 aGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggc                                                        <  1:621012‑M2/251‑195 (MQ=255)                                                                                                                                                                                                      cATCCGGAACCCGGACGAAAGTAAAAATGCATATGCGTTGCACTAAAAAAGCggtcatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgagcagctttcccttcaggcgggat                                                   <  2:492250‑M2/251‑200 (MQ=255)                                                                                                                                                                                                          cGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcat                                               <  2:132188‑M2/251‑204 (MQ=255)                                                                                                                                                                                                               cccGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagc                                          >  1:387902‑M2/1‑43 (MQ=255)                                                                                                                                                                                                                      gAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagc                                   <  2:240923‑M2/251‑216 (MQ=255)                                                                                                                                                                                                                       aaaGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagcc                                  >  2:102798‑M2/1‑35 (MQ=255)                                                                                                                                                                                                                       aaaGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagcc                                  >  2:102810‑M2/1‑35 (MQ=255)                                                                                                                                                                                                                       aaaGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagcc                                  <  1:103292‑M2/251‑217 (MQ=255)                                                                                                                                                                                                                        aagtcataatgcatatGAGTTGCACTAAAAAAGCggaaatgactccaacttattgatagtgttttatgttaagataatccccgctgactttgtcatgcagatccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggttctgactcagattcaggttatgccgctcaattcgcggcgtatatcgcatgctgattccgaccagctttcccttcaggcgtgcttcatacaccggccagcc                                  <  2:625556‑M2/243‑217 (MQ=255)                                                                                                                                                                                                                          gTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactacaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcctacagcggccagacatc                               <  1:154921‑M2/251‑220 (MQ=255)                                                                                                                                                                                                                            aaaaaTGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattctgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattatgtgcagctttcccttcaggcgggattcatacagcggccagccatcc                              >  1:344038‑M2/1‑30 (MQ=255)                                                                                                                                                                                                                                  gCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatcc                       <  1:480155‑M2/251‑228 (MQ=255)                                                                                                                                                                                                                                        gAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatc                  <  1:130824‑M2/250‑233 (MQ=255)                                                                                                                                                                                                                                         aGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagatccaccgattttgagaacgccagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggcccgccatccgtcatccatatcac                <  1:69020‑M2/251‑235 (MQ=255)                                                                                                                                                                                                                                          gTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcacc               >  1:242893‑M2/1‑16 (MQ=255)                                                                                                                                                                                                                                             gCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacg            <  2:173396‑M2/251‑239 (MQ=255)                                                                                                                                                                                                                                                  aaaaaaGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaa        <  1:274677‑M2/250‑243 (MQ=255)                                                                                                                                                                                                                                                  aaaaaaGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaa        <  1:387987‑M2/250‑243 (MQ=255)                                                                                                                                                                                                                                                     aaaGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaaggg    <  1:370590‑M2/251‑247 (MQ=255)                                                                                                                                                                                                                                                        gCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgctgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttacgtcgggattaatacagcggccagccagccgtcatccatatcaccacgtcaaagggtg  <  2:407891‑M2/250‑249 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                         CAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTACCCCAAAAACC  >  NC_000913/2406539‑2407035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.