Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,185,238 | 0 | A | G | 26.0% | 166.9 / 10.7 | 74 | S22P (TCC→CCC) | thiM | hydroxyethylthiazole kinase |
Reads supporting (aligned to +/- strand): ref base A (10/44); new base G (19/0); total (30/44) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.26e-10 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTG > NC_000913/2184996‑2185482 | cGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCAAGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGAGAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCCCATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGt < 1:55484/251‑1 (MQ=255) gATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGCCCCACATTATTGGTCATGCAGTGCACAAAAGGGG‑GATG‑TT‑GGTGGAAAAgg > 1:53873/1‑251 (MQ=255) cAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGGGTTTGC‑CCACACCATTGGGCATGCAGGGCCCAAGAGGGG‑GATG‑TTTGGGGAAAAAgggg > 1:379100/1‑249 (MQ=255) aaGCTTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGATGGG‑AATG‑TT‑GGTGAAAAAGGTGTa < 2:324003/251‑1 (MQ=255) aGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGGACCACAACATTGGTCATGCAGGGCGCAAGAGGGG‑GAGG‑TT‑GGGGaaaaaagggga > 2:252880/1‑244 (MQ=255) aGCGTCCAGGGGGTTTGGGAGCTTTCTGCTTGCTCAACGGCAGCACGCAGCGCCTGAGAGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCAATGGCGATAGCCGCAAACTGACTGGTCACTTCGGTTTCGATAACCACCGCTGGCGATGCACCGAGTGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTTGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTaa < 2:4314/251‑1 (MQ=255) ccAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAAcg‑cg < 2:179468/250‑1 (MQ=255) aGGGTGGTTTAGAGCTTTTTGCTTGCTCATCGGCAGCACGCACCGCCTGAGCGCGTGGCTGCGTCAGGGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACAGCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACT‑CGTgc < 2:246330/251‑1 (MQ=255) gagtTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTCAAGG‑GTTGCACCACATCATTGGTCCAGCCGGGCACAAAAGGGG‑GATG‑TT‑TGGGCAAAAGGTGTAAcg‑cagtgccc > 2:247094/3‑244 (MQ=255) cgcgccagatcagctccttgctCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAg < 1:269313/234‑1 (MQ=255) gagaGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACAACATTTGTCATGCCGTGCACAAGAGGGG‑GATG‑GT‑GGGGAAAAAAGTGTGACG‑CGGGCGCAGGTTgc > 1:1616/1‑251 (MQ=255) gagCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGGGTTTGACCCAC‑TCCGTGGGCATGCCGGGCACACGAGGGG‑AGTGGTG‑GGGGAAAAAGG‑GTAACG‑CCTGCGCacgaggcgc > 2:23431/1‑243 (MQ=255) tttGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAc < 2:76048/250‑1 (MQ=255) ttgcgtggtcaatggcagacagCATCGCCGGAGAGCGTGGCTGCGTCAGTGTGCCAGCGTTAATCAACAAGGATCTGGCGATAGCCGAAAAGTGTCTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCATAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGaccc < 2:33760/229‑4 (MQ=255) gcttgctCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑Ccag < 1:367000/251‑1 (MQ=255) ggCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACtt < 1:141320/251‑1 (MQ=255) ggCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACtt < 1:231678/251‑1 (MQ=255) agcaCGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGAAAAAG‑GTTGCCCCACCACATTGGTCAATCAGTGCACCAGAGGGG‑GAAG‑GT‑GGGGGAAAAGGGGGAACG‑CGTGCGCAGAGTGCGCTTAAA‑CCAGCAGGGC‑GACATGcg > 2:11659/1‑250 (MQ=255) gcaCGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCAt < 1:93738/251‑1 (MQ=255) gCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGCCTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATGGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GATTTGCATAGtt < 2:211378/251‑1 (MQ=255) gCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGtt < 2:378009/251‑1 (MQ=255) cTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGCACCACATCATTGGGCATGGAGGGCGCAAGAGGGG‑GAAG‑TT‑GGGGAAAAAGGGGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGCC‑Gagtcggaagctttggtccc > 1:89119/1‑233 (MQ=255) aGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGcc < 1:125215/251‑1 (MQ=255) ggTGGCTGCGTCAGGTTGCCATCGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACTACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTGGCTCCTGCCATaa < 2:308408/250‑1 (MQ=255) tGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGGGCCACATCATTTGGCATGCAGGGCGCAAGAGGGG‑GATG‑TT‑GGTGAAAAAAGGGTAAAG‑CGTGGGCAGATTGCGCTGAACACCAG‑AGGGC‑GACCTGGATAGTTTGCTCCTGcccaca > 2:144455/1‑245 (MQ=255) gCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTgaag < 1:289516/251‑1 (MQ=255) gCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTgaag < 1:5416/251‑1 (MQ=255) cattgtgCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTTACTGGCCTCTTCGGTTTCGAGAACCATCGCTTGCGATGCACCGGGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACATGAGGGA‑AATG‑TT‑GGTGAAAAAGGGGTAACG‑CGTGCGCAGATTGCGCTGAGC‑CCTGCAGGTC‑GACTGGCATAGTTTGCTCCTGCCATAACGTGAAGAAGc < 1:285651/248‑1 (MQ=255) ccAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGAcc < 1:15870/251‑1 (MQ=255) ccAACGTTAATCAACAAGGCACTGGCGATAACCGCAAACTGACTGGCCTCTTAGGTTTCGATAACCATAGCTGGAGATGCACCGAGCGCCAGCAAGGCATTGGCGGTAAACG‑GTTGCAACACGTCAATGGCCATGTCGGGCACAAGAGGGG‑CATG‑GT‑GGTGAAAAAGGGGTAAAG‑CGTGGGCCGGATGCGCTAAAC‑CCAGCAGGTCAGA‑TTGCTAAGTTTGATCCTGCATTAACGCGGAAAAGCAATGAcc > 1:341437/1‑251 (MQ=255) cAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCt < 1:167385/251‑1 (MQ=255) aCGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGGACCACATCATTTGGCAAGCAGGGCAAAAGAGGGG‑GATG‑TT‑GGGGAAAAAGGGGTAACG‑CGGGCGCAGATTGCGCTGAAC‑CCCGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGGGAAGAAGCAATGACCtgg > 1:227774/1‑251 (MQ=255) gTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCtggtg < 1:350276/251‑1 (MQ=255) tAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGCACCACCTCATTGGTCATGCAGGGCCCAAGAGGGG‑GATG‑TT‑GGGGAAAAAGGGGTAACG‑CGGGCGCAGATTGCGCTGTAC‑CCCGCAGGGC‑GACTTGCCTAGTTTGCTACTTCCATAACGTGAAGAAGCAATGAACtggtggg > 1:309553/1‑250 (MQ=255) aaTCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAGC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTggtggt < 1:285898/250‑1 (MQ=255) agcaacaaGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCAGCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATGGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTcc < 1:137946/249‑1 (MQ=255) aTCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTcc < 1:28640/251‑1 (MQ=255) aTCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTcc < 2:294725/251‑1 (MQ=255) aTCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCGTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTcc < 2:297873/251‑1 (MQ=255) tCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑GATG‑TT‑GGTGAAAAAGGGGTAAAG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGAACTGGTGGTCCg > 1:125232/1‑251 (MQ=255) caaGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGCACCACCTCATTGGTCATGCAGTGCACAAGAGGGG‑GATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGAc > 1:280109/1‑251 (MQ=255) aGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑GATG‑TT‑GGGGAAAAAGGGGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGGC‑GACTTGCATAGTTTGCTCCTGCCATAACGGTAAGAAGCAAAGACCTGGGGGTCCGGGACtt > 1:360378/1‑251 (MQ=255) aCTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCt < 1:223670/251‑1 (MQ=255) aCTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCt < 1:349370/251‑1 (MQ=255) cGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCCCCACATCATTGGTCACGCAGTGGACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGGGTAACG‑CGTGAGCAGAATGCGCTGAAC‑CCCCCAGGGC‑GCCTTGCATAGTTTGATCCTGCCATAACATGCAAAAGCAATGACCTGGTGGGACGTGGCTTCCCCACGCt > 1:261725/1‑251 (MQ=255) aaaCTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATcc < 1:232751/251‑1 (MQ=255) ccTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGAAAAAG‑GTTGCACCACCTCATTTGTCAATCCGGGGACAAGAGGGG‑GATG‑TT‑TGTGGAAAAGGTGTAAAG‑CGTGCGCCGATTGCGCTGAAC‑CCCGCAGGAC‑GGCTTTCATAGATTGGTCCCGCCATAACGTGAAGAAGCAAAGAACTTGTGGTGCGTGGCTTTCCTACGCTTGCATTATACCGATCAgggg > 2:132464/1‑248 (MQ=255) ttCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGGGAAAAAGGGGTAACG‑CGTGCGCAGAATGCGCTGAAC‑CCAGCAGGAC‑GACTTGCATAGTTTGCTCCTGCCATAACGGGAAGAAGCAAAGACCTGGTGGGCCGTGGATTCCCTACGCTGGCATTTTCCAGATCAGGGGATACg > 1:350079/1‑251 (MQ=255) cGGTTTCGATAACGATCGCTGGCGATGCACCGAGCGCCAGAAAGGTATGGGAGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCGGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATAc < 2:157063/248‑1 (MQ=255) cGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACgg < 1:4378/250‑1 (MQ=255) gtCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTAt < 2:288903/249‑1 (MQ=255) aTAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTTGTCATGCAGTGCACAAGAGGGG‑GATG‑TT‑GGGGAAAAAGGGGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCCTAGTTTGCTCCTTCCCTAAAGTGAAGAAGCAATGACCTGGTGGTCCGGGACTTCCCTACGCTGGCATTATCCAGATCAGGGGGTACGGGGATTtctc > 1:4483/1‑251 (MQ=255) aaCCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAg < 1:44546/251‑1 (MQ=255) cATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGCACCACCTCATTGGTCATGCCGTGCACCAGAGGGG‑GATG‑TT‑GGTGGAAAAGGGGTAACG‑CGGGCGCAGATTGCGCTGAAC‑CCAGCAGGGC‑GACTTGCATAGTTTTCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTCCGCTGGCCTTATCCCGATCAGGTGATACGGGTATTTCTCCGccc > 2:16273/1‑250 (MQ=255) aTCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAAG‑GTTGGACCCCATCATTTGTCCTGCCGGGCCCCAGAGGGG‑GATG‑TT‑GGTGAAAAAGGTGTAACG‑CGGGGGCAGATTGGGCTGGAA‑CCAGCAGGGC‑GACTTGCATAGGTTTCTCCTGCCCTAACGGGAAGAAACAAAGACCTTGGGGTCCGGGGCTTTCCTACGCCGGCCTTATCCAGCTCCGGGGATACGGGTATTTCTCAGCCtt > 2:8725/1‑251 (MQ=255) gtgCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACAGCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCt < 2:236822/247‑1 (MQ=255) cGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCCACACATAAATGGCCATCCCGTGCACCAAAGGGG‑GATG‑TT‑TGAGAAAAAAGGGTAACA‑CGGGCGCCGATTTCGCTGAAC‑CCAGCACGGC‑GACATGCATAGTTTGCTCCTGGCATAAAGCGAAGAAGGAATGACCTGGTGGTCCGTGACTTCCCCACGCTGGCATTTTCCAGATCACGGGATAAGGGTATTTCTCCGCCTTTACGc > 1:322726/1‑248 (MQ=255) gATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑GATG‑TTTGGGGAAAAAGG‑GTAACG‑GGGGCGCAGATTGGGCTGAAC‑CCAGCAGGGC‑GACTTGCATAGTTTGCTCCTGCCATAAAGTGAAGAAGCAATGACCTGGGGGGCCGTGGCTTCCCTACTCCGGCCATATCCAGATCAGGGGATACGGGGATTTCTCAGCCTTCACGCAGa > 1:373492/1‑250 (MQ=255) gAGCGCCAGCAAGGTATTGGCGGAAAAGG‑TTTGCACCACATCCTTGGTCCTGCAGTGCACAAAAGGGGGAAGT‑TT‑GGGGAAAAAG‑TGTTACGACG‑GCGCAGATTACGCTGAAC‑CCCGCCGGGC‑GACTTGCATAGTTTTGTCCTGCCCTAAAGGGGACAAGCAAAGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATTCAGATCAGGGGGAACGGGTATTTTTCAGCCTTTAACCAGAAGGGCcccc > 1:105534/1‑251 (MQ=255) aGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCAcccc < 1:171608/251‑1 (MQ=255) aGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCAcccc < 1:358192/251‑1 (MQ=255) aGCGCCAGCAAGGTATTGGCGGTAAAGG‑GTTGCACCACATCATTGGTCATGCAGTGCACAAAAGGGG‑AATG‑TT‑GGGGAAAAAGGGGTAACG‑CGGGCGCAGATTGCGCTGAAA‑CCAGCAAGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGAAATGACCTGGGGGTCCGGGACTTCCCTACGCTGGCATTATCCCGATCAGGTGATACGGGGATTTCTCAGCCTTCACGCAGAAGGGCAcccc > 1:373837/1‑251 (MQ=255) aTTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGtt < 1:252880/250‑1 (MQ=255) tGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGc < 2:104528/250‑1 (MQ=255) ggCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGAACCCCGAGTCGTTTGGTTGCg > 1:377020/1‑250 (MQ=255) gg‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATc < 2:379100/251‑1 (MQ=255) gg‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTGGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATc < 2:95307/251‑1 (MQ=255) gg‑TTTGCACCACATCATGGGTCATGCAGTGCACAAGAGGGG‑AATG‑TG‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATc < 2:249573/251‑1 (MQ=255) tttGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGc > 1:47713/1‑251 (MQ=255) catTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATg < 1:264610/250‑1 (MQ=255) atTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGt > 1:99463/1‑251 (MQ=255) cAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAgc > 1:383920/1‑251 (MQ=255) gagGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTg < 1:16273/251‑1 (MQ=255) gagGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTg > 1:98139/1‑251 (MQ=255) | CGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAGG‑TTTGCACCACATCATTGGTCATGCAGTGCACAAGAGGGG‑AATG‑TT‑GGTGAAAAAGGTGTAACG‑CGTGCGCAGATTGCGCTGAAC‑CCAGCAGGTC‑GACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTG > NC_000913/2184996‑2185482 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |