Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,096,090 | 0 | A | G | 36.2% | 72.7 / 13.8 | 47 | I83V (ATT→GTT) | hisF | imidazole glycerol phosphate synthase subunit HisF |
Reads supporting (aligned to +/- strand): ref base A (4/26); new base G (17/0); total (21/26) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.18e-09 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
ATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGAAAGCCGCACCCGCGTCACTCAATGGGAAAC > NC_000913/2095844‑2096319 | aTGCTGGCAAATCGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTaa < 1:187658/251‑1 (MQ=255) aaaaCGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGCACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTAA‑AGCTCTgg > 2:200401/1‑251 (MQ=255) aaaCGCATAATCCCATGTCTCGACGTTCGTGATGGGCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑a < 2:208994/251‑1 (MQ=255) gCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGGTTAA‑GGCTCCGG‑a > 1:47569/1‑247 (MQ=255) gCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGAt < 1:382663/251‑1 (MQ=255) catcatcccaggttgcGACGTTCGTGATGGTCCGGTGGTGAAAGGC‑GTACAGTTTCACAACCATGAAATCAGTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCGCCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATg < 2:221220/236‑1 (MQ=255) aTAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGATTAA‑Gtctatgttgagagc > 2:208586/1‑240 (MQ=255) aaTCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGcc < 1:78962/250‑1 (MQ=255) gTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGATACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTAA‑GTCTCTTG‑aaaaaggccccaaaatt > 1:305821/1‑236 (MQ=255) tcGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGATTAA‑GTCTCTGG‑GAGATGcccccgaaatattt > 2:265556/1‑239 (MQ=255) cGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCt < 1:116391/251‑1 (MQ=255) cGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCt < 1:205137/251‑1 (MQ=255) gttttggtgcggtggtGAAAGGCTGT‑CAGTTTCGCAACCAACAAATCATGGGCGATTTCGGGCCGCTGGCAACACGCTACGCTGAAGAAGGCGCTGACGAACTGGGGTTCTACGATATCACCGCTTCCAGCGGTGGCCGTGTGGTATATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACAATCCGTTTTGTGTGGCGGTTTGGATTAA‑GTCTCTGG‑AATATGCCG‑AG‑AAAATTCTTT‑CCTTTGgc < 2:173178/241‑1 (MQ=255) gTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGgc < 2:86591/251‑1 (MQ=255) gTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGATAA‑GGCTTTGG‑GAGAGGGCG‑CG‑CAAATTCTTTTCCTTTgg > 1:5834/1‑251 (MQ=255) ggTCAGGTTGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATTATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTTAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCTGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCgg < 2:348852/250‑1 (MQ=255) ggtgAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTGA‑GACTCTTG‑GAGATGGCG‑CG‑CAAATTTTTT‑TCTTTGgccgggggaaaaatt > 2:225928/1‑238 (MQ=255) gAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTcc < 1:201393/250‑1 (MQ=255) aaaGGC‑GAACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTAAAGT‑TTTGG‑AAGATTCCGGCG‑AAAATTTTTT‑CTTTTggtcgggtaaaaatttcat > 1:46580/1‑234 (MQ=255) aatgcgtgctgcttCGCAACCATGAAATTATTGGCTATATCTTGCCGCTGGCAAAAGGCTACGCTGAAGAACGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGGTCGACATTCCGTTTTGTGTTGCGGTTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGTCTCGGATAAAATTTCCATc < 2:34695/239‑1 (MQ=255) aCAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACtctc < 1:15654/251‑1 (MQ=255) aGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCt < 2:239636/251‑1 (MQ=255) gTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑GAAATGCCC‑CG‑AAAAATCTTT‑TCTTTTGCGCGGGTAAAATTTTCATCAACTATCCtt > 1:192810/1‑250 (MQ=255) tttCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTAA‑GTCTCTGG‑AAGATGCCC‑CG‑AAAATTCTTT‑TCTTTTGCGCGGGTAAAATTTTCATCAACTCTCCTgc > 1:36160/1‑251 (MQ=255) cATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGGTTTA‑GGCTCTGG‑CAGAAGCCG‑CG‑GAAATTCTTT‑CCTTTGGTGCGGGTACAATTTTCATCAACTCACCTgacctgggcg > 2:104984/1‑241 (MQ=255) aaaTCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCa < 1:204621/251‑1 (MQ=255) ggCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTTA‑GTGTCTGG‑AAGATGCCC‑CG‑AAAATTTTTT‑TCTTTTGGGCGGGTAAAAATTCCCTCAAACCCCCTGCGCTgggcgaccccacaataa > 2:385360/1‑235 (MQ=255) atCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCg < 1:28122/251‑1 (MQ=255) gCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTg < 2:306813/250‑1 (MQ=255) gCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATAGCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAGCTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCg < 2:152086/251‑1 (MQ=255) tGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTgg < 2:150981/168‑1 (MQ=255) tGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTgg > 1:150981/1‑168 (MQ=255) gaagaaGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTAA‑GTCTCTGG‑GAGATGGCG‑CGGAAAATT‑TTT‑CCTTTGGCGCGGGTAAAATTTTCCTCAACTCCCCCGCGCCGGCAGACCCCACACTAATTACTCCCCTGGCCGCTCGCCTTGGGGTGccggg > 2:89749/1‑247 (MQ=255) cTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATAGACATTCCGTTTTGTGTGGCGGGTGGGGGTAA‑GTCTCTGG‑AAAATGGCG‑CG‑AAAAATTTTT‑CCTTTGGAGCGGGTAAAATTTTCAACAAATCTCCTGGGCCTGCAGACCCCACATTAATTACCCGCCTGGCCGCACGCTTTGGCGTGCAGGGTATTGTGGTGGGTATTGATAcccggg > 1:209926/1‑247 (MQ=255) aCGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGGTTA‑GTCTCTGG‑GAGAAGCCC‑CG‑AAAATTTTTT‑CCTTTTGGGGGGATAAAAATTTCATCAACTCTCCCGCCCTGGCCGACCCCACACTAAATAATTCCCTGGCCGATCGCTTTTGCGGGCAGTGGCTTTTGGTTGGTATTggttccctgtac > 2:238175/1‑240 (MQ=255) aatatCACCGCTTCCATCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGAGTAA‑GGTTCTGGGAAG‑TGACG‑CG‑AAAATTATTT‑TCTTTTGCGCGGGTACAATTTTCATCAAATCTCCTGCGCTTGCAGACCCAACATTAATTAATCGCCTGGCCGGTCGCGTTGGGGGGCGGTGACTTGTGGTCGGTATGGAtgaccgggtagt > 2:264464/2‑240 (MQ=255) aGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAATCCGGTaa < 1:187075/251‑1 (MQ=255) ggTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCTG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGAATc < 2:47569/251‑1 (MQ=255) aGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGGTTAA‑GTCTCTGG‑GAGATGCCG‑CG‑GAAATTCTTT‑TCTTTTGCGCGGGTAAAATTTCCATTAACTCTCCTGCGCTGGCAGACCCAACCTTAATTACTCGCCTGGCCGCTCGCTTTGGCGTGCCGTGTATTTTGGGCGGGATTGATACCTGGGACGACGCCGAAACCCGGAAATATCATGTGAATCAATATAACgg > 1:135277/1‑251 (MQ=255) aTCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTAA‑GTCTCTGG‑AAGATGCCC‑CG‑CAAATTCTTT‑TCTTTGGCGCGGGTAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCCACATTAATTACTCGCCCGGCCGATCGCTTTGGCGTGCGGTGTATTGTGGTCGGGATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGaa > 1:33144/1‑250 (MQ=255) cgcgTGGCGGAAGTGTTCGACATTCCATTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCTCTGGCAGACCCATCATTAATTTCTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGGCGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGAAAGc < 1:149146/249‑1 (MQ=255) cgcgTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGa < 1:25889/226‑1 (MQ=255) cgcgTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGGGGGGTTAA‑GTCTCTGG‑GAGATGCCG‑CG‑AAAATTCTTT‑CCTTTTGCGGGGGTAAAAATTTCATCAACTCTCCCGCGCTGGCAGAACCAACATTAATTAATCGCCTGGCCGATCGCTTTGGCGTGCAGGGTATTGTGGGCGGTATTGATACCTGGTACGACGCCGAAAACGGGAAATATTATGTGaagatcggaagagcgtcggggagggg > 2:25889/1‑227 (MQ=255) cgTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGCGGGGGTAA‑ATCCCTGG‑GCGAAGCCC‑CC‑GAAATTTTTT‑CCCTTTGCGCGGGGAAAAATTTCATCCACCCTCCCGCGCTCGCGGGCCCAAACTTTATTAATCGCCCTGCCGATCGCTTTTGGGTGCAGGGGATTGGTGTCGGGATTTATACATGGGACGACCCCGAAACCCGTCAATCTCATTTGAATCAATATACCCGCGATGGAAGcctgc > 2:128429/1‑248 (MQ=255) gAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGAAAGCCGCACCCGCGt < 2:86289/251‑1 (MQ=255) aaGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGAAAGCCGCACCCGCGTc < 1:246541/251‑1 (MQ=255) ccGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGAAAGCCGCACCCGCGTCACTCAATGGGAAAc < 1:200401/251‑1 (MQ=255) | ATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGC‑GTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAA‑GTCTCTGG‑AAGATGCCG‑CG‑AAAATTCTTT‑CCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGAAAGCCGCACCCGCGTCACTCAATGGGAAAC > NC_000913/2095844‑2096319 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |