Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,707,484 +GA :: IS3 (+) +4 bp coding (219‑222/1608 nt) dppA ← dipeptide ABC transporter periplasmic binding protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 315229 =NA (NA)25 (0.520)
+TC
23/492 0.7 100% noncoding (1/1255 nt) IS3 repeat region
?NC_000913 = 3707487 0 (0.000)coding (219/1608 nt) dppA dipeptide ABC transporter periplasmic binding protein
* ? NC_000913 = 2171428NA (NA)50 (1.040) 43/496 0.1 100% noncoding (1258/1258 nt) IS3 repeat region
?NC_000913 3707484 = 0 (0.000)coding (222/1608 nt) dppA dipeptide ABC transporter periplasmic binding protein

CCTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAATTGTGATGTTTGTTG  >  NC_000913/3707234‑3707733
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                         
ccTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATc                                                                                                                                                                                                                                                           <  1:302982/251‑1 (MQ=255)
 agtatgagcgcaaaaggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaca                                                                                                                                                                                                                                                          <  1:114532‑M2/2‑1 (MQ=255)
    atgagcgaaaacggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctccattcggaacactttgaaaacaagcacctcgcttaggcctgtgtccatattacgtgggtcggagcacaaa                                                                                                                                                                                                                                                        >  2:66046‑M2/247‑248 (MQ=255)
      gagcgcaaaaggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCg                                                                                                                                                                                                                                                     >  1:248556‑M2/245‑251 (MQ=255)
             aaaggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGc                                                                                                                                                                                                                                              <  2:307150‑M2/14‑1 (MQ=255)
              ctGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttaccc                                                                                                                                                                                                                                              <  2:51785‑M2/250‑11 (MQ=255)
              aaggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGcc                                                                                                                                                                                                                                             <  1:292714‑M2/15‑1 (MQ=255)
              aaggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTGCGGTGGTGcc                                                                                                                                                                                                                                             <  1:37524‑M2/15‑1 (MQ=255)
                    gctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGAtttt                                                                                                                                                                                                                                       <  2:18916‑M2/21‑1 (MQ=255)
                          acgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTc                                                                                                                                                                                                                                 <  1:111345‑M2/27‑1 (MQ=255)
                                cccAAGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATTGTACGGGGTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCCCACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcgg                                                                                                                                                                                                                           >  2:46188‑M2/1‑222 (MQ=255)
                                atgcctgcgtggaaagcttctttcattcgctgaaagtggaatggatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAg                                                                                                                                                                                                                           <  2:34818‑M2/33‑1 (MQ=255)
                                 tgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatccAACTTCGGTGGTGCCGATTTTAAATTCAAcc                                                                                                                                                                                                                             >  2:247232‑M2/218‑248 (MQ=255)
                                 ccATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggt                                                                                                                                                                                                                          >  1:379361‑M2/1‑221 (MQ=255)
                                  gcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGAc                                                                                                                                                                                                                         <  1:247232‑M2/35‑1 (MQ=255)
                                      gcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGTTGCCGATTTTAAATTCAACCAGACGGt                                                                                                                                                                                                                      <  2:271731‑M2/38‑1 (MQ=255)
                                         tCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtg                                                                                                                                                                                                                    >  2:8815‑M2/1‑213 (MQ=255)
                                          ggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaaactcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTtata                                                                                                                                                                                                                  >  2:245194‑M2/209‑250 (MQ=255)
                                            aaGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttaaccagcaatagtggccacccggctaagtgagta                                                                                                                                                                                                                <  2:222618‑M2/250‑41 (MQ=255)
                                              gTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaac                                                                                                                                                                                                             <  1:150724‑M2/251‑44 (MQ=255)
                                                         gtcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaatggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGGGCCGATTGTAAATTCAACCAGACGGTTATAAAGCGGGACGGAagag                                                                                                                                                                                                  <  2:186430‑M2/58‑1 (MQ=255)
                                                          tcgctgaaagtggaatgtatccatggagaacattttagcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggggtggcggcctcagtccggaacaatttgaaaacaagaaccgcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAagag                                                                                                                                                                                                  <  2:367460‑M2/58‑1 (MQ=255)
                                                                   gtggaatgtatccagggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAgg                                                                                                                                                                                        <  2:242027‑M2/68‑1 (MQ=255)
                                                                       ttATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgattcacatg                                                                                                                                                                                     >  2:169359‑M2/1‑183 (MQ=255)
                                                                          gtatccatggagcaccctttatcagccgggaaataatgcgggccacggtgtttaattctatcgaatgtgattacaatcggaggcggcggcacagttggtgtggcggcctacgtccggcacaatttgaaaacaagaacctcgcctaggcctgttgccatattacgcgggtaggatccCACTTCGGTCGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTGAATGGTGGTGcc                                                                                                                                                                                 >  2:130302‑M2/177‑251 (MQ=255)
                                                                                               tcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcatgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGCGGTGCCGGAGGTAAACAGCTGCGGGtt                                                                                                                                                            >  1:349739‑M2/156‑251 (MQ=255)
                                                                                                   gACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaa                                                                                                                                                           >  2:170378‑M2/1‑155 (MQ=255)
                                                                                                    cgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacactttgcaaacaaaaacctcgcttaggcctgtgtccctaatacgtggataggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAAGTTGGGCCGGAGGTAAACAGCTGCGGGTTAAAcc                                                                                                                                                       >  2:42572‑M2/151‑251 (MQ=255)
                                                                                                    cgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaaaaacctcgcttaggcctgtgtccatattacgtggggaggatccCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGGCGGAAGAGGCGTCATCGGGGGGGCCGGAGGTAAAAACCTGCGGGTTAAAcc                                                                                                                                                       >  2:332849‑M2/151‑251 (MQ=255)
                                                                                                    aCGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagaaaactctcagtcagaggtgactcacatgaccaaaacagtatcaaccagtaaaaaacac                                                                                                                                                       <  1:75349‑M2/251‑98 (MQ=255)
                                                                                                       gaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCtt                                                                                                                                                    <  2:171204‑M2/104‑1 (MQ=255)
                                                                                                       aTCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgt                                                                                                                                                    <  2:208790‑M2/251‑101 (MQ=255)
                                                                                                          ataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCg                                                                                                                                                 <  2:352034‑M2/107‑1 (MQ=255)
                                                                                                             atgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTAATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCgg                                                                                                                                                >  1:128588‑M2/142‑249 (MQ=255)
                                                                                                                gaACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcat                                                                                                                                           <  1:282234‑M2/251‑110 (MQ=255)
                                                                                                                  acacCACATCATCGGCGTTCAGTTCACGCGTCGGTTTTAATTCTTTATTGTCGTGCCACTTCACGCCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCTCTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaacacgcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattc                                                                                                                                         >  2:101836‑M2/1‑140 (MQ=255)
                                                                                                                    caacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGGGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTc                                                                                                                                       >  1:598‑M2/135‑251 (MQ=255)
                                                                                                                     aacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCt                                                                                                                                      <  2:96387‑M2/118‑1 (MQ=255)
                                                                                                                         gtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGc                                                                                                                                  >  1:243090‑M2/130‑251 (MQ=255)
                                                                                                                            tttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAAt                                                                                                                               >  1:104230‑M2/127‑251 (MQ=255)
                                                                                                                               ggCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgc                                                                                                                            <  1:199840‑M2/251‑125 (MQ=255)
                                                                                                                                         aatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGtttt                                                                                                                  <  1:6282‑M2/138‑1 (MQ=255)
                                                                                                                                                   gTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGACGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgc                                                                                                        <  1:95349‑M2/251‑145 (MQ=255)
                                                                                                                                                              ggagtcacagtgggtgtggcggcctcagtccggaacaagttgaaaacaagaacctcgcttaggcctgtggcaatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCTGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTGTAGCCTGAACACTTGCTGCGAc                                                                                             <  2:69828‑M2/159‑1 (MQ=255)
                                                                                                                                                                  tGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgt                                                                                         <  1:47231‑M2/251‑160 (MQ=255)
                                                                                                                                                                  tGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgt                                                                                         <  1:226130‑M2/251‑160 (MQ=255)
                                                                                                                                                                  gcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTc                                                                                         <  1:245194‑M2/163‑1 (MQ=255)
                                                                                                                                                                  gcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTc                                                                                         <  1:365866‑M2/163‑1 (MQ=255)
                                                                                                                                                                      agttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAg                                                                                     <  2:31962‑M2/167‑1 (MQ=255)
                                                                                                                                                                                gcggcctcagtcccgaacaaattgaaaacaagaaccccgcttaggcctggttccatatttcgtgggtaggatcaCACTTCGGTGGGGGCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCt                                                                           <  2:338315‑M2/177‑1 (MQ=255)
                                                                                                                                                                                ccaccTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagccc                                                                           >  2:36983‑M2/2‑78 (MQ=255)
                                                                                                                                                                                  ggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTtgct                                                                                                  <  1:127425‑M2/154‑1 (MQ=255)
                                                                                                                                                                                  ggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTtgct                                                                                                  >  2:127425‑M2/73‑226 (MQ=255)
                                                                                                                                                                                         cGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactc                                                                   <  2:279120‑M2/250‑182 (MQ=255)
                                                                                                                                                                                              gaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCa                                                             <  2:104230‑M2/191‑1 (MQ=255)
                                                                                                                                                                                                   aGGTATAGGATTTCCCGCCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggccaagcggctaagtgagtaaactataagtcagaggcgactcacatgacaaaaacagcatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaccgcttcggtgttactgccgcagcccatgaactcagcctgtatt                                                         <  2:304364‑M2/250‑192 (MQ=255)
                                                                                                                                                                                                       gaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTg                                                    >  1:110789‑M2/52‑251 (MQ=255)
                                                                                                                                                                                                        taGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcac                                                   <  1:3543‑M2/251‑198 (MQ=255)
                                                                                                                                                                                                        aaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCcctta                                                   <  2:285742‑M2/201‑3 (MQ=255)
                                                                                                                                                                                                           gTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaac                                                <  2:232339‑M2/251‑201 (MQ=255)
                                                                                                                                                                                                            caagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACttt                                               >  1:234954‑M2/47‑251 (MQ=255)
                                                                                                                                                                                                               gatcctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTGCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTc                                            <  2:84619‑M2/208‑1 (MQ=255)
                                                                                                                                                                                                               gaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGGGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTc                                            <  2:364021‑M2/208‑1 (MQ=255)
                                                                                                                                                                                                                 accacgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCaa                                          <  2:45688‑M2/210‑1 (MQ=255)
                                                                                                                                                                                                                          aggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACg                                 <  1:3121‑M2/219‑1 (MQ=255)
                                                                                                                                                                                                                                  ccACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgcagtaaac                           <  2:74899‑M2/249‑222 (MQ=255)
                                                                                                                                                                                                                                    ccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGTTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTTAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCt                        <  1:91822‑M2/228‑1 (MQ=255)
                                                                                                                                                                                                                                           acgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAAt                >  2:40993‑M2/16‑251 (MQ=255)
                                                                                                                                                                                                                                           acgtgggtaggatcaCACTGCGGTGGGGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGATGCGCCATAGGTGGTGCCGGAGGTAAACAACTGAGGGTTAAACCCTTCCGGATATCCTACTGAGCAATAAACCAGAGTTTTAGCCTGATCACTTGCTTCGACGGTCATAGCCACCAGGCTGAGATCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTgctcctat                <  2:43059‑M2/236‑4 (MQ=255)
                                                                                                                                                                                                                                             gtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAATtg              <  1:343165‑M2/238‑1 (MQ=255)
                                                                                                                                                                                                                                                ggCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgcagtaaacagcaaaatcagcagac           >  1:51785‑M2/1‑14 (MQ=255)
                                                                                                                                                                                                                                                      ggATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgcagtaaacagcaaaatcagcagacgtcttc     <  2:355143‑M2/251‑244 (MQ=255)
                                                                                                                                                                                                                                                        caCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCACTTGTGAtgtttgtt   >  2:310116‑M2/3‑251 (MQ=255)
                                                                                                                                                                                                                                                        caCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAATTGTGAtgtttgtt   <  1:267069‑M2/249‑1 (MQ=255)
                                                                                                                                                                                                                                                        aTCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgcagtaaacagcaaaatcagcagacgtcttctg   <  2:383494‑M2/251‑246 (MQ=255)
                                                                                                                                                                                                                                                         aCACGTCGGTGGTGCCGATTGTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCCGAGCAATAAACCAGAGTTTTAGTCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTGTTTCAAGGAAATACGCATTATTCTGCTCCAATTGTGATGTttgttg  <  1:348096‑M2/250‑1 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                         
CCTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAATTGTGATGTTTGTTG  >  NC_000913/3707234‑3707733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.