| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 5,159 | 0 | G | A | 28.8% | 102.8 / 13.4 | 54 | intergenic (+139/‑75) | thrC/yaaX | threonine synthase/DUF2502 domain‑containing protein YaaX |
| Reads supporting (aligned to +/- strand): ref base G (37/0); new base A (0/15); total (37/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.23e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATCTGCCAAAAGAGCTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACCACGGCTGGTGGAAAC > NC_000913/4917‑5408 | aTCTGCCAAAAGAGCTGGCAGACCGTGCTGATTCACCCTTGCTTTCACATAATCTGCCAGCCGATTTTGCTGCGTCGCGTAAATTGCTGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGACGGGTTTGCTTTTATGCAGCTCGGCTTTTTTATGAAGAAATTATGGAGAAACATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGAAA‑C‑TTAGAGAT‑TAGCAT‑TGCGGAGCATaaca > 2:210298/1‑250 (MQ=255) cTGCCAAAAGAGCTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑cc > 2:360037/1‑251 (MQ=255) cAAAAGAACTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑ccgccg > 1:92737/1‑251 (MQ=255) gTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAAtctc > 2:113545/1‑251 (MQ=255) aaTCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATg > 2:546463/1‑251 (MQ=255) aTCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATg > 1:43891/1‑250 (MQ=255) gCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCAGTTCTCATCGAGGAATCTCCGGATATCGACGCATAACGGGCAATGATaa > 2:369592/1‑250 (MQ=255) ccgccgATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaaa > 1:446407/1‑249 (MQ=255) cgcagttttggtggctttacatAAATTGAGGATAATTCATCAAAAAAATCTATTCATTATCTCAATGCGGCCGTTTTTTTTTTTAGGCAGCCGTGTTTTTTAAAAAAAAAATTATGAAAAAAAAGGACGGGAAAAAAGGAAAAATCCTAAAAAAGGGTGTTAA‑T‑TTAGATAT‑TGGGGT‑GGCAGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 2:690788/230‑1 (MQ=255) tttGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGATTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAAcc > 2:787736/1‑251 (MQ=255) gttgcgtAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaa > 2:411445/1‑250 (MQ=255) cgtAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaaa > 1:269511/1‑247 (MQ=255) tatgatgaATCATCATAAAAATCTATTCATTCTCTAAATCGGGCGGGTTTTGTTTTTATGCAGCCCGGTTTTTTTATAAAAAATTTAGGAAAAAAAAGGACAGGAAAAAAGAAGAAATCCTAAAAAAATGGGGTAA‑C‑TTAGAAAT‑TAGGAT‑TGGGGAAAATAAAAC‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCt < 1:36843/249‑1 (MQ=255) aaTCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACt > 2:250304/1‑251 (MQ=255) caGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGCAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGGGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGCAAAAAAGATGCAATCTATCGTACTCGCACt > 1:302122/1‑251 (MQ=255) aTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTg > 1:261108/1‑251 (MQ=255) gggcggggttggtttttATGCAGCCCGGTTTTTTTATAAAAAAATTAGGGAAAAAAATGACAGGAAAAAAGGAGAAATTCTAAAAAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGAAAAAAAACAC‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgc < 1:298243/238‑1 (MQ=255) cGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcagc > 1:125458/1‑250 (MQ=255) gtttttATGCCGCCCGGTTTTTTTAAGAAAAAATAGAGAAAAAAAATGAGAGGAAAAAAGAAAAAATTCT‑AAAAAAAGGGGTAA‑CCTAAGAGAT‑AAGGAT‑GGGGAAAAAAAACAG‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCt < 2:200063/248‑1 (MQ=255) gtttttATGCAGCCCGGTTTTTTTATGAAAAAATTAGGGAAAAAAATGACAGGGAAAAAGGAAAAATTCTAAATAAATGCGTTAA‑C‑TTAGAGAT‑TAGGAT‑GGCGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCt < 1:411445/248‑1 (MQ=255) gCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTg > 1:474114/1‑251 (MQ=255) ttttagccaccccggttttttaaaaaagaaATTATGAAAAAAAATAAAAGAAAAAAAGGAAAAATACTCAAAAAATGCGGTAA‑C‑GTAGATAT‑AAGTTT‑TGCGAAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGc < 1:356085/225‑1 (MQ=255) ttttATGGAGCCGGGTTTTTTTAAGAAGAAATTATGAAAAAAAATGAGAGGAAAAAGGGAAAATTTCTCAATAAGGGCGGTAA‑T‑TGAGAGAT‑TAGGAT‑GGCGGAAAATAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGc < 1:298432/250‑1 (MQ=255) tGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAAt > 2:380540/1‑251 (MQ=255) gCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAACAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAAtt > 1:253376/1‑251 (MQ=255) gCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGaactt > 2:344976/1‑248 (MQ=255) agccaggttttttaATGAAGAAATTAGGGAGAAAAAAGACGGGGAAAAAGAAGAAATTCCAAATAAATGCGGTAA‑‑‑TTAGAAATAGAGAAT‑GGCGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCGGTGAAAAAGATGCAATCTATCGTACGCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTAc < 2:63043/243‑1 (MQ=255) cccGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGt > 1:407544/1‑251 (MQ=255) ttttttATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTcc > 1:630337/1‑251 (MQ=255) ttgataaaaaaaTTATGGAAAAAAATGACAGGAAAAAAGGAGAAATT‑TCAAATAATGGGTTATTC‑TTAGAGTG‑AAGGTT‑TGGGGA‑AAAAACAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCg < 1:116043/241‑1 (MQ=255) ttATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTc > 1:843522/1‑251 (MQ=255) aTGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGCGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑ACGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCACTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTc > 2:567194/1‑249 (MQ=255) aTGAAGAAATTATGGAAAAAAATGAGAGAAAAAAAGAAAAAATTCTAAAAAACTGCGATAA‑C‑TTAGAGAT‑TAGGTT‑GGCGGATAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAg < 1:545429/251‑1 (MQ=255) taaagaaaaaaaaTGACAGGAAAAAAGGAAAAATTCAAAATAAATGTGTTAA‑C‑TAATAGAT‑TAGGAT‑TGAGAAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTACAATTa < 1:309989/242‑1 (MQ=255) tagggaaaaaaaGGACAGGAAAAAAGGAAAAATTCAAAATAAATGGGTTAA‑T‑TTAGAGAT‑TAGGTT‑GGGGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTAc < 1:360037/243‑1 (MQ=255) ggaaaaaaaTGAAAGGAAAAAAGGAAAATTTCCAAAAAAAGGGGGTAA‑C‑ATAGATAT‑TAGGAT‑GGGGGAAAATAAAAC‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGAt < 2:562261/247‑1 (MQ=255) aaaaaTGAAAGGAAAAAAGGAGAATTTCAAAATAAATGGTGTCT‑C‑TAAGATAT‑GAGGATGTG‑GGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGc < 1:185586/251‑1 (MQ=255) aaaaTGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCg > 1:124817/1‑251 (MQ=255) tGACAGGGAACAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCg > 2:259641/1‑251 (MQ=255) aCAGGGAAAAAGGAGAAATTCTCACTAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGAGGAGAATAACAA‑ACGCCGTTCTCATCGAGAAATCTCCGGCTATCGACCCATACCGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCAATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTACAATTACAGATAGGCGATCGTg > 2:586028/1‑251 (MQ=255) cgggAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGCTAGGCGATCGTGAt > 2:327898/2‑251 (MQ=255) aaaaaGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGACTAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAACGGCGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAACATTACAGATAGGCGATCGTGATAATc > 2:238622/1‑251 (MQ=255) aaaaaGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATc > 2:237266/1‑251 (MQ=255) aaaaaGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑ACGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGCAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATc > 2:649805/1‑251 (MQ=255) gagaAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCt > 1:784049/1‑251 (MQ=255) gaAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTAt > 2:371543/1‑251 (MQ=255) aaTTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTAtt > 1:420826/1‑250 (MQ=255) aTTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTAc > 1:99488/1‑251 (MQ=255) tcAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTggg > 1:303112/1‑251 (MQ=255) aaaataagtgcgatatctgaaaaaT‑TAGGAT‑GGCGAAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTggg < 1:249853/228‑1 (MQ=255) gCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTc > 1:830719/1‑251 (MQ=255) gTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACt > 1:243719/1‑251 (MQ=255) tAA‑C‑TGAGAGAT‑TAGAAT‑TGCGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACt < 1:250304/250‑1 (MQ=255) t‑tAGGAT‑GGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACCAc < 1:787736/250‑1 (MQ=255) gagaATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCGCTGGCGCGACCACGGCTGGGGGaa > 2:817786/1‑250 (MQ=255) agaATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACCACGGCTGGTGGAaac > 1:117002/1‑251 (MQ=255) | ATCTGCCAAAAGAGCTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAA‑C‑TTAGAGAT‑TAGGAT‑TGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACCACGGCTGGTGGAAAC > NC_000913/4917‑5408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |