Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 519,143 Δ14,682 bp [ybbO][allZ] [ybbO], [tesA], ybbA, ybbP, rhsD, ybbC, ylbG, selU, allS, allA, [allR], [allZ]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 519143 533824 14682 70 [0] [0] 69 [ybbO]–[allZ] [ybbO],[tesA],ybbA,ybbP,rhsD,ybbC,ylbG,selU,allS,allA,[allR],[allZ]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 5191420 (0.000)69 (0.640) 59/492 0.5 100% coding (8/810 nt)
coding (624/627 nt)
ybbO
tesA
NADP(+)‑dependent aldehyde reductase YbbO
multifunctional acyl‑CoA thioesterase I and protease I and lysophospholipase L1
?NC_000913 533825 = 0 (0.000)coding (815/816 nt)
noncoding (197/235 nt)
allR
allZ
DNA‑binding transcriptional repressor AllR
small RNA AllZ

GCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGTC  >  NC_000913/533577‑534063
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                               
atcggtcagggcgatcacctcgtcggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAAt                                                                                                                                                                                                                                               <  1:331361‑M2/3‑1 (MQ=255)
atcggtaagagcgatcaaccagtcggctgagcgatcaacactttctggtgaatacagatcgatcaacacgccggtacatcccatgctgttcatgcgctaaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgagctttccaggcccattccactggaacatccggtaattacgacagatttttgcataactttacctgtcaggatctccgttgctttatAAt                                                                                                                                                                                                                                               >  2:707915‑M2/249‑251 (MQ=255)
  cggtcagggcaataacctcgtcggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcatcactttacctgtcaggatctccgttgatttatAAtgt                                                                                                                                                                                                                                             >  2:804135‑M2/247‑251 (MQ=255)
   ggtcagggcgatcacctcgtcggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAAtgtc                                                                                                                                                                                                                                            >  1:65086‑M2/246‑251 (MQ=255)
   ggtcagggcgatcacctcgtcggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaacactggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAAtgtc                                                                                                                                                                                                                                            >  2:848430‑M2/246‑251 (MQ=255)
      cagggcgatcacctcgtcggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAAtgtctg                                                                                                                                                                                                                                          <  2:830535‑M2/8‑1 (MQ=255)
         ggctatcacctcgtcggctgcgcgatcaaccctttctggtgaatccagatcgatcaacacgccggtacatcccctgctgttcatgcgctcaacatcatccggtttccggccacctgccagcacatgaaaaccctggcgttttacttcgagcgcgctttccaggccaattccactggcacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGc                                                                                                                                                                                                                                      >  2:138785‑M2/240‑251 (MQ=255)
         ggcgatcgcctcgtcggctgcgcgatcaacactttcgggtgaatccagaccgatcaccacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGc                                                                                                                                                                                                                                      <  2:361937‑M2/12‑1 (MQ=255)
             atcacctcgtcggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGTATcc                                                                                                                                                                                                                                  >  2:673280‑M2/236‑251 (MQ=255)
             atcacctcgtcggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATcc                                                                                                                                                                                                                                  >  1:306843‑M2/236‑251 (MQ=255)
               cacctcgtcggctgcgcgagcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCg                                                                                                                                                                                                                                <  1:862370‑M2/18‑1 (MQ=255)
                     gtcggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGc                                                                                                                                                                                                                          >  1:838696‑M2/228‑251 (MQ=255)
                     gccggctgcgcgttcaaccctttctgttgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGc                                                                                                                                                                                                                          <  2:848365‑M2/24‑1 (MQ=255)
                       gggctgcgcgatcaactctttctggtgaatccagatcgatcaacgcgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCgg                                                                                                                                                                                                                        <  2:453663‑M2/26‑1 (MQ=255)
                       cggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATTTCTGTCGCATCCCGCTCTGCg                                                                                                                                                                                                                         <  1:247230‑M2/25‑1 (MQ=255)
                        ggctgcgcgatcaacactttctggtgaatacagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtcattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGcggc                                                                                                                                                                                                                       >  1:445984‑M2/225‑250 (MQ=255)
                              gcgatcaacactttcgggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGt                                                                                                                                                                                                                <  1:95187‑M2/33‑1 (MQ=255)
                               cgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacccgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGtt                                                                                                                                                                                                               <  1:159408‑M2/34‑1 (MQ=255)
                                attcaacactttctggtgaagccagttcgataaacacgcaggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGttt                                                                                                                                                                                                              <  2:459310‑M2/35‑1 (MQ=255)
                                   aaaccctttctggtgaagccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGtttttt                                                                                                                                                                                                           <  2:165336‑M2/38‑1 (MQ=255)
                                              ggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctaaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCTGAGCGGGTTTTTTTGACAAAAt                                                                                                                                                                                                  <  2:643401‑M2/47‑1 (MQ=255)
                                               gtcaatcccgatcgatcaacacgccggtaaatcccctgctgttcatgcgctcaacataatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccacaggaacattcggaaattaaaaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGGATCCCCCTCTGCGGAGCGGGTTTTTATGACAAAATTTg                                                                                                                                                                                               >  2:784972‑M2/202‑251 (MQ=255)
                                                 gaatccagatcgatcaccacgccggtcaatcccatgctgttcatgcgctcaacatcatccggtttccggaaacctgccagcacaagaaaaccctggcgttttaattcgaccgcgctttccaggccaattccactggaatatccggtaattaagaccgctttttgcataactttacctgtcaggatctccgttgctttatCATGTCTGTCGCATCCCGCCCTGCGGAGCGGGCTTTTTTGACCAAATTTGa                                                                                                                                                                                              >  2:147531‑M2/200‑250 (MQ=255)
                                                       agatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTgg                                                                                                                                                                                       >  2:663027‑M2/194‑251 (MQ=255)
                                                        gatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTTGACAAAATTTGAAAGTTgg                                                                                                                                                                                       >  2:338353‑M2/193‑251 (MQ=255)
                                                        gatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTgg                                                                                                                                                                                       >  1:669933‑M2/193‑250 (MQ=255)
                                                           cgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGaaa                                                                                                                                                                                    >  2:558665‑M2/190‑250 (MQ=255)
                                                            gatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGaaaa                                                                                                                                                                                   >  1:532698‑M2/189‑250 (MQ=255)
                                                             atcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAAt                                                                                                                                                                                 >  1:886143‑M2/188‑251 (MQ=255)
                                                                        ggtaaatcccatgctgttcatgcgctcaacatcatccgggttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCaataaa                                                                                                                                                                      <  1:88510‑M2/75‑1 (MQ=255)
                                                                            aatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCaataaat                                                                                                                                                                     >  1:583784‑M2/173‑248 (MQ=255)
                                                                               cccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaccactggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttaactgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGGGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGaggg                                                                                                                                                               >  2:148272‑M2/170‑250 (MQ=255)
                                                                                ccatgctgttcattcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTa                                                                                                                                                              <  1:217546‑M2/83‑1 (MQ=255)
                                                                                 catgctgttcatgcgctcaacatcatccgggttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaagtaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAg                                                                                                                                                             <  2:189764‑M2/84‑1 (MQ=255)
                                                                                       gttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatcgccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAAt                                                                                                                                                         <  1:649731‑M2/88‑1 (MQ=255)
                                                                                                   aacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATggcaaacat                                                                                                                                           >  1:374347‑M2/150‑248 (MQ=255)
                                                                                                   aacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAAt                                                                                                                                           >  1:561485‑M2/150‑251 (MQ=255)
                                                                                                    acatcatccggtttccggcaatctgccagcacatgaaaacccttgcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagacctagttttgcataactttacctttcaggatctccgttgctttatAATGTCTGTCGCTTCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGgcaaaaagg                                                                                                                                          <  2:623182‑M2/103‑3 (MQ=255)
                                                                                                      atcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGGTTTTTTGACAAAATTTGAAAGTTGGTAAAATTTTCCAATAACTAGAGGAAGGAATAAAATGGCAAAAATg                                                                                                                                          >  2:393941‑M2/147‑249 (MQ=255)
                                                                                                         atccggtttccgtcaacctgccagcacatgaaaaccctggcgttttaattcgcgcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAACTTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGc                                                                                                                                     >  2:523752‑M2/144‑251 (MQ=255)
                                                                                                           ccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGcc                                                                                                                                    <  2:558005‑M2/109‑1 (MQ=255)
                                                                                                                     gcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGc                                                                                                                         >  2:258250‑M2/132‑251 (MQ=255)
                                                                                                                         cctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAatg                                                                                                                     <  2:532698‑M2/124‑1 (MQ=255)
                                                                                                                            gccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAatgtat                                                                                                                  <  1:15573‑M2/127‑1 (MQ=255)
                                                                                                                                 cacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAAGTGTCCAATAAAGAGATGGAGGAATAAAATGGCAAAAATGAGGGGCGTTGACGCGGCAATTTATGTGCt                                                                                                             <  2:270921‑M2/132‑1 (MQ=255)
                                                                                                                                      gaaaaccctgtcggtttaattcgatcgcgctttccaggccaattacactggaacatccggtaattaagaccgatttttgcatcactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCTCGATCTGCGGATCGGGTGTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGTAATAAAATGGCAAAAATGAGAGCCGTGGACGCGGCATTGTATGTGCTGgag                                                                                                         <  2:146038‑M2/136‑1 (MQ=255)
                                                                                                                                          accctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGagaa                                                                                                       >  2:428107‑M2/111‑248 (MQ=255)
                                                                                                                                          accctggcgtttaaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGagaaaga                                                                                                    <  1:293372‑M2/141‑1 (MQ=255)
                                                                                                                                           ccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGagaaagaa                                                                                                   <  1:138785‑M2/142‑1 (MQ=255)
                                                                                                                                               ggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcatgatctccgttgctttatAATGTCTGACGCAGCCCGCTCTGCGGAGCGGGGTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTa                                                                                               <  2:340253‑M2/146‑1 (MQ=255)
                                                                                                                                                             agcgcgctttccaggccaattccactggaacatccggtaattaataccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCaaaa                                                                                                                                             <  1:346525‑M2/100‑1 (MQ=255)
                                                                                                                                                             agcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGGAGGAATAAAATGGCaaaa                                                                                                                                             >  2:346525‑M2/92‑191 (MQ=255)
                                                                                                                                                                gcgctttccaggcgaagtccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTGTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTTCCGCCGtcgtt                                                                              <  2:664188‑M2/163‑3 (MQ=255)
                                                                                                                                                                              aattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGc                                                                >  1:272589‑M2/75‑251 (MQ=255)
                                                                                                                                                                                     ctggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGAAGCTGcaatcaat                                                         >  1:228298‑M2/68‑251 (MQ=255)
                                                                                                                                                                                       ggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGcaatcaat                                                         <  1:338353‑M2/185‑1 (MQ=255)
                                                                                                                                                                                        gaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCACTAAATCCg                                                      >  2:468200‑M2/65‑251 (MQ=255)
                                                                                                                                                                                         aacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGt                                                     >  1:277907‑M2/64‑251 (MQ=255)
                                                                                                                                                                                         aacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGt                                                     >  1:207531‑M2/64‑251 (MQ=255)
                                                                                                                                                                                                 gtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCa                                             <  2:306843‑M2/196‑1 (MQ=255)
                                                                                                                                                                                                        caaccgatttttgcatcactttacctgtcaggatctccgtcgctttatAATGTCTGTCGCATCCCGCCCTGCGGAGCGGGTTTTTTTGCCAAAATTTGAAAGTTGGAAACATTTTTCACTAAATAGAGGTAGGAATAAAATGGCAAAAATGACAGCCGTTGACGCGGCAATGCATGTGCTGGAGAAAGAAGGTATCACTACAGCCTTCGGTGTTCCGGGAGCTGCAATCAATCAGTTCTACTCAGCGATGc                                      >  2:494811‑M2/49‑251 (MQ=255)
                                                                                                                                                                                                        agaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGAATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGc                                      >  1:405949‑M2/49‑251 (MQ=255)
                                                                                                                                                                                                                ttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCACATCCCGCTCTGCGGAGCGGGTTTTTTTGACAACATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGGGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTCCTCAGCGATGCGAAAGCAc                              >  1:246866‑M2/41‑251 (MQ=255)
                                                                                                                                                                                                                 tttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCg                                          <  2:602241‑M2/199‑1 (MQ=255)
                                                                                                                                                                                                                 tttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCg                                          >  1:602241‑M2/40‑238 (MQ=255)
                                                                                                                                                                                                                                 tgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACAt             >  1:113104‑M2/24‑251 (MQ=255)
                                                                                                                                                                                                                                           tccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGt   >  1:367119‑M2/14‑251 (MQ=255)
                                                                                                                                                                                                                                            ccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGTTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGATAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGTCGGTATTCGTCACATTCTGGCGCGTc  <  2:65086‑M2/239‑1 (MQ=255)
                                                                                                                                                                                                                                            ccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGcgcg    <  1:496202‑M2/237‑1 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                               
GCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGTC  >  NC_000913/533577‑534063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: