Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,066,152 Δ12,778 bp insH6[yoeF] insH6, yoeA, insD3, insC3, yoeA, isrC, flu, yeeR, yeeS, yeeT, cbeA, cbtA, yeeW, [yoeF]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2066152 2078929 12778 76 [0] [0] 73 insH6–[yoeF] insH6,yoeA,insD3,insC3,yoeA,isrC,flu,yeeR,yeeS,yeeT,cbeA,cbtA,yeeW,[yoeF]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20661510 (0.000)73 (0.680) 62/494 0.4 100% intergenic (‑387/+154) cobU/insH6 cobinamide‑P guanylyltransferase/cobinamide kinase/IS5 family transposase and trans‑activator
?NC_000913 2078930 = 0 (0.000)coding (356/357 nt) yoeF putative uncharacterized protein YoeF

CGAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATGCACTAGGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCA  >  NC_000913/2065901‑2066396
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     
cGAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTAt                                                                                                                                                                                                                                                       <  1:6241/251‑1 (MQ=255)
 gAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTAt                                                                                                                                                                                                                                                       >  1:566086/1‑250 (MQ=255)
 gAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTAt                                                                                                                                                                                                                                                       >  1:80340/1‑250 (MQ=255)
      aaGATAGCATGACGTAATGGCAAGACTAGCTCGTGTTAACGTCCGACAAAATGCGTCATTGACATCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACGGCCGGAACAACCAACAAAGGGGCATTGTGTTCTGAAATCCAGGCTATTGAGTCAACGTCAGCGAAAGAGCTGCGCTGTAAAAGAACTTGTAAAACAACATAATAGAATTATCCGGAATGGTGGCGACTATaatttc                                                                                                                                                                                                                                                 <  2:345276‑M1/251‑7 (MQ=255)
       aGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATGCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcg                                                                                                                                                                                                                                                <  2:152798‑M1/251‑8 (MQ=255)
           ggCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGTCAGCGGTTTCTGTTGATTGACACATTTCATTCAGATAATGAATTAATGCTGCGGCCGGAACAACCAGCAATCGGTCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatatcgatt                                                                                                                                                                                                                                             <  1:693091‑M1/250‑11 (MQ=255)
           ggCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgatt                                                                                                                                                                                                                                             <  1:584483‑M1/250‑11 (MQ=255)
                 acgtaatagcCAGACTTTCTCGTGTTAACGTCCGACAAAATTCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCATGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctc                                                                                                                                                                                                                                      <  2:39417‑M1/247‑18 (MQ=255)
                 aCGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctc                                                                                                                                                                                                                                      <  1:562758‑M1/251‑18 (MQ=255)
                 aCGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttct                                                                                                                                                                                                                                       <  1:12706‑M1/250‑17 (MQ=255)
                    ggataacccgcctttctcgtgttAACGTCCGACAAAATGCGGCATTGACAGCGGCTTCTGTGGATTGACACATTTCATTCAGCTAATGAATTAATGCTAATGCCGGAACAACCAGCAAACGGGCATTGAGTTATGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgcatggttctcgg                                                                                                                                                                                                                                    >  2:637023‑M1/12‑231 (MQ=255)
                    gAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcgga                                                                                                                                                                                                                                   <  1:648353‑M1/251‑21 (MQ=255)
                     aaTAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggat                                                                                                                                                                                                                                  >  1:782531‑M1/1‑230 (MQ=255)
                        aGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatg                                                                                                                                                                                                                                 >  2:461603‑M1/1‑227 (MQ=255)
                        aGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAAAAACCAGCAAACGGGCATTGTGTTCTGAAATCCAAGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGTCGACTATaatttcgattggttctcggatgag                                                                                                                                                                                                                               <  2:401907‑M1/251‑25 (MQ=255)
                           cAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggat                                                                                                                                                                                                                            <  1:498922‑M1/251‑28 (MQ=255)
                               cTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatg                                                                                                                                                                                                                        >  1:357491‑M1/1‑220 (MQ=255)
                                  tctcGTGTTAACGTACGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTGCATTCAGATAATGAATTAATGCTACTGCCGGAACAGCCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaagttcgattggttctcgtatgagtatgatgac                                                                                                                                                                                                                      <  2:862857‑M1/250‑34 (MQ=255)
                                                ccGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACAGTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagat                                                                                                                                                                                                        <  1:629084‑M1/250‑48 (MQ=255)
                                                  gACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataag                                                                                                                                                                                                     <  2:347039‑M1/251‑51 (MQ=255)
                                                   aaacaatgcgTCATTGACAGCGGCTTCTGTGGATTGACCCATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAGCCAGCAAACGGGTATTGTGTTCTGAAATCCAGGCTATTGATTCTACGTCAGCGACAGATCTGCGCTGTAAAAGAACATGTCAAACAACGAACTAGAATTATCCGGACTGGTGGCGACTATaatttcgattggatctcggatgaggatgatgccggtgataaacagata                                                                                                                                                                                                       >  2:482028‑M1/5‑200 (MQ=255)
                                                        aTGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatca                                                                                                                                                                                                >  2:400950‑M1/1‑195 (MQ=255)
                                                        aTGCGTCAGTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaa                                                                                                                                                                                               <  2:727641‑M1/251‑57 (MQ=255)
                                                            gTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatg                                                                                                                                                                                             >  1:384957‑M1/1‑191 (MQ=255)
                                                            gTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGAGAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgag                                                                                                                                                                                           <  2:347056‑M1/251‑61 (MQ=255)
                                                                        ggTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttg                                                                                                                                                                               >  1:52530‑M1/1‑179 (MQ=255)
                                                                            tCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgg                                                                                                                                                                           >  1:450532‑M1/1‑175 (MQ=255)
                                                                               gtgGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggc                                                                                                                                                                         >  1:537113‑M1/1‑172 (MQ=255)
                                                                                  gATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaacc                                                                                                                                                                     <  1:191371‑M1/251‑83 (MQ=255)
                                                                                    ttGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccggggaaccct                                                                                                                                                                   >  1:646703‑M1/1‑167 (MQ=255)
                                                                                     tGACACATTTCATTCAGATAATGAATTAATGCACCTGCCGGAACAACCGGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATTTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccat                                                                                                                                                                   <  2:566086‑M1/250‑85 (MQ=255)
                                                                                        cacaTTTCAGTCAGATAATTAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcatt                                                                                                                                                               <  1:34524‑M1/251‑89 (MQ=255)
                                                                                            tttCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaat                                                                                                                                                           >  1:184717‑M1/1‑159 (MQ=255)
                                                                                                attcaGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaa                                                                                                                                                        >  2:407255‑M1/1‑155 (MQ=255)
                                                                                                           gAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattact                                                                                                                                            >  1:468470‑M1/1‑144 (MQ=255)
                                                                                                           gAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCAGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattact                                                                                                                                            >  2:822433‑M1/1‑144 (MQ=255)
                                                                                                             aTTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgagtaaaacgggaattacttc                                                                                                                                          >  2:413687‑M1/1‑142 (MQ=255)
                                                                                                                 aTGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgctt                                                                                                                                      >  1:473420‑M1/1‑138 (MQ=255)
                                                                                                                   gCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcg                                                                                                                                    <  1:407255‑M1/251‑116 (MQ=255)
                                                                                                                   gCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcg                                                                                                                                    >  1:84574‑M1/1‑136 (MQ=255)
                                                                                                                   gCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttc                                                                                                                                     <  2:251675‑M1/250‑115 (MQ=255)
                                                                                                                         gccagaacaAACAACAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAAAACTTGTAAAACAACGTAATATAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgagtatgatgtcggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacggtaattccttcgcttcgccgaa                                                                                                                               <  2:178383‑M1/246‑121 (MQ=255)
                                                                                                                         gCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatgcacagataagaatcaatgagcaaggagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgttt                                                                                                                              <  1:287077‑M1/251‑122 (MQ=255)
                                                                                                                               acaacCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatt                                                                                                                        <  2:143529‑M1/251‑128 (MQ=255)
                                                                                                                                 aacCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttc                                                                                                                      <  1:400950‑M1/251‑130 (MQ=255)
                                                                                                                                  acCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcg                                                                                                                     >  1:200556‑M1/1‑121 (MQ=255)
                                                                                                                                    cAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcc                                                                                                                   <  2:473420‑M1/251‑133 (MQ=255)
                                                                                                                                          aCGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagc                                                                                                             >  1:116593‑M1/1‑113 (MQ=255)
                                                                                                                                                   gtgtTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctt                                                                                                    <  1:230092‑M1/251‑148 (MQ=255)
                                                                                                                                                          gAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggag                                                                                             <  1:300250‑M1/251‑155 (MQ=255)
                                                                                                                                                          gAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttgg                                                                                               >  2:360236‑M1/1‑97 (MQ=255)
                                                                                                                                                                          aTTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctt                                                                             >  1:255531‑M1/1‑81 (MQ=255)
                                                                                                                                                                             cAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttg                                                                           <  1:537781‑M1/250‑173 (MQ=255)
                                                                                                                                                                              aaCGTCAGCGACAGAACTGCGCTGTAAAAGAGCTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgagaatgatgacggtgattcacagataagaatcaatgagcaatgagggttgccgggcaacccttattgaataaaacgggaattactttgcttcgccgtttatcatttcgcccatagcgttcagctttgtggagatctcgcggcgttctttgga                                                                         <  2:284234‑M1/251‑175 (MQ=255)
                                                                                                                                                                                   cAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagct                                                                    <  2:886280‑M1/251‑180 (MQ=255)
                                                                                                                                                                                   cAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagct                                                                    <  1:871134‑M1/251‑180 (MQ=255)
                                                                                                                                                                                   cAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatgtcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagct                                                                    <  2:21215‑M1/251‑180 (MQ=255)
                                                                                                                                                                                       gACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggc                                                                >  1:346777‑M1/1‑68 (MQ=255)
                                                                                                                                                                                          aGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatt                                                             >  1:45697‑M1/1‑65 (MQ=255)
                                                                                                                                                                                                gcgcTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcattt                                                            <  2:782531‑M1/246‑188 (MQ=255)
                                                                                                                                                                                                     gTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgt                                                  <  2:184717‑M1/251‑198 (MQ=255)
                                                                                                                                                                                                       aaaaGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgaggtaa                                                <  2:554765‑M1/251‑200 (MQ=255)
                                                                                                                                                                                                             aCTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtca                                          <  1:355695‑M1/251‑206 (MQ=255)
                                                                                                                                                                                                                tGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaac                                        <  2:357491‑M1/250‑208 (MQ=255)
                                                                                                                                                                                                                  tAAAACAACGTAATAGAATTATCCGGAGTGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcg                                     >  1:734795‑M1/1‑41 (MQ=255)
                                                                                                                                                                                                                   aaaaCAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcg                                     >  1:497043‑M1/1‑40 (MQ=255)
                                                                                                                                                                                                                       caacGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatctt                                <  2:255531‑M1/251‑216 (MQ=255)
                                                                                                                                                                                                                       caacGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatctt                                >  1:444321‑M1/1‑36 (MQ=255)
                                                                                                                                                                                                                            tAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcat                             >  1:747441‑M1/1‑31 (MQ=255)
                                                                                                                                                                                                                                  aaTTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggtatttttgatgatgtaatcgtcaacgcgatcttcatagtcacct                     >  1:137052‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                                                   aTTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctt                    >  1:853828‑M1/1‑24 (MQ=255)
                                                                                                                                                                                                                                               ggtggCGACTCTaatctcgatgggttctcggatgcggatgatgacggtgataaacagataagaatcaatgagcaatgagggatgccgggcaaccctaattgaataaaacgggaattacttcgcttcgccgtttttcatttcgccaatagatttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcggtcttcatagacacctttcatgctggcg         >  2:732024‑M1/1‑12 (MQ=255)
                                                                                                                                                                                                                                               ggtggCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctttcatgctggcg         >  1:249078‑M1/1‑12 (MQ=255)
                                                                                                                                                                                                                                               ggtggCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcaccttgcatgctggcga        <  2:384957‑M1/251‑240 (MQ=255)
                                                                                                                                                                                                                                                gtggCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctttcatgctggcgat       <  2:450532‑M1/251‑241 (MQ=255)
                                                                                                                                                                                                                                                     gACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtctcctttcatgctggcgatgatgc  <  1:413687‑M1/251‑246 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     
CGAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATGCACTAGGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCA  >  NC_000913/2065901‑2066396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.