Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,299,522 Δ12,535 bp mdtPalsB mdtP, mdtO, mdtN, ytcA, yjcS, alsK, alsE, alsC, alsA, alsB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4299522 4312056 12535 41 [0] [0] 43 mdtP–alsB mdtP,mdtO,mdtN,ytcA,yjcS,alsK,alsE,alsC,alsA,alsB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42995210 (0.000)41 (0.800) 39/492 0.2 100% intergenic (‑155/+43) fdhF/mdtP formate dehydrogenase H/putative multidrug efflux pump outer membrane channel
?NC_000913 4312057 = 0 (0.000)intergenic (‑15/+44) alsB/alsR D‑allose ABC transporter periplasmic binding protein/DNA‑binding transcriptional repressor AlsR

TCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCTTCATCTTCAATGCCTTTTTTCATATCTACCCAAAATGGGTTGGAGAGGGTTTTCAATACGACAGCATATTCGGCGGCAGCAAAAGCGCTGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAAGTTAGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATC  >  NC_000913/4311813‑4312308
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                           
tccgcccggacgattttgccgttatcgacgaccaggttgattttgcaacctgatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAgg                                                                                                                                                                                                                                                       >  2:265398‑M2/245‑251 (MQ=255)
           gattttgccgttatcgacgaccaggttgattttgcaacctgatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACt                                                                                                                                                                                                                                           <  1:52712‑M2/18‑1 (MQ=255)
                       atcgacgaccaggttgattttgcaacctgatgcgcaataggagcaagccgtgacgacttttgtcatcggtctcgctccagttaatcaaatcacgcatacgctctctcgactacagtatgcatcttttatgccacattgtatgtgtggtcattccctgagattacgggcactatttattcaaaactttgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCg                                                                                                                                                                                                                                <  1:372268‑M2/29‑1 (MQ=255)
                             gaccaggttgattttgcaacctgatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGACGGCGGAATTAc                                                                                                                                                                                                                         <  1:51996‑M2/36‑1 (MQ=255)
                              accaggttgattttgcaacctgatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTAcc                                                                                                                                                                                                                        <  1:117764‑M2/37‑1 (MQ=255)
                               ccaggttgattttgcaacctgatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCt                                                                                                                                                                                                                       <  1:270337‑M2/38‑1 (MQ=255)
                                caggttgattttgcaacctgatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTAACtt                                                                                                                                                                                                                      >  2:206901‑M2/213‑251 (MQ=255)
                                         tttgcaacctgatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTAt                                                                                                                                                                                                              <  1:128562‑M2/47‑1 (MQ=255)
                                         tttgcaacctgatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTAt                                                                                                                                                                                                              <  1:385047‑M2/47‑1 (MQ=255)
                                          ttgcaacctgatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTAtt                                                                                                                                                                                                             <  1:152315‑M2/48‑1 (MQ=255)
                                                   gatgcgcaataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAgcgcg                                                                                                                                                                                                     <  1:409630‑M2/56‑1 (MQ=255)
                                                           ataggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTg                                                                                                                                                                                              >  1:271587‑M2/186‑248 (MQ=255)
                                                            taggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTgaga                                                                                                                                                                                           >  1:7788‑M2/185‑250 (MQ=255)
                                                              ggggcaaaccgtgacgacttttttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGagaaga                                                                                                                                                                                        <  2:262699‑M2/69‑1 (MQ=255)
                                                                           acgactttttgcatcggtctagctccagtttatcaactcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcagtccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTTCCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgc                                                                                                                                                                           <  2:278695‑M2/82‑1 (MQ=255)
                                                                                    ttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGttt                                                                                                                                                                   <  1:221278‑M2/90‑1 (MQ=255)
                                                                                    ttcatcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcatttatgccatatgttatgtgaggtcattccctgagattacgggcactatttattcaaaactctgacgaaaaacaggctgttgtcagttttgacttgaGGTAATGGGACAGTAGCTCCGCGATGGCGGAATTACCTTTTTGGTATTTTAGCGCGCCGGGTGAGAAGAAAGCAACAAAGGCGCCGGttt                                                                                                                                                                   <  2:95261‑M2/90‑1 (MQ=255)
                                                                                       atcggtctcgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGgttttttc                                                                                                                                                               >  1:273829‑M2/158‑250 (MQ=255)
                                                                                               cgctccagttaatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCatatta                                                                                                                                                        <  1:145926‑M2/101‑1 (MQ=255)
                                                                                               cgctccagttaatcaaatcacgcagacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCatatt                                                                                                                                                         <  2:219682‑M2/100‑1 (MQ=255)
                                                                                                         aatcaaatcacgcatacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctggcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTAACTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCtt                                                                                                                                              <  1:379654‑M2/111‑1 (MQ=255)
                                                                                                                      atacgcgctctcgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGc                                                                                                                                >  1:331655‑M2/127‑251 (MQ=255)
                                                                                                                            gctctcgactacagtatgcatcttttatgcctcattttatgtggggtcattccctgatagtacgtgcactatttattcaaaacgctgacgaaaaacaggctgtggtcagttttgtcgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTTCCTTTTTCTTATGTCAGCGCTCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATTTTAATAGTAGCTTGTTCAATGTTTAGCTGGGCg                                                                                                                          <  2:298715‑M2/131‑1 (MQ=255)
                                                                                                                                 cgactacagtatgcatcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACaga                                                                                                                     <  2:271587‑M2/136‑1 (MQ=255)
                                                                                                                                              catcttttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCg                                                                                                        >  2:197058‑M2/103‑251 (MQ=255)
                                                                                                                                                   tttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCa                                                                                                                                         >  2:183331‑M2/98‑213 (MQ=255)
                                                                                                                                                   tttatgccacattttatgtggggtcattccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCa                                                                                                                                         <  1:183331‑M2/116‑1 (MQ=255)
                                                                                                                                                                           cattccctgatattaagggcactatttattcaaaactctgacgaaaaacaggctgtagccagttttgacgcgaGGTAAGGGGACAGTAACCCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAACGCGTCCAGCAAGGTTGGTTGTAATATTCTTGc                                                                           >  2:323744‑M2/74‑251 (MQ=255)
                                                                                                                                                                            attccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGcc                                                                          >  1:18686‑M2/73‑251 (MQ=255)
                                                                                                                                                                               ccctgatattacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAg                                                                       <  1:430172‑M2/182‑1 (MQ=255)
                                                                                                                                                                                      attacgggcactatttattcaaaactctgccgcaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGAGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGGTCATTGTTGAGCTGGGCGACATAGACAAAAAAAGCGTCTAGCAAGGTTGGTTGTAATATTCTtgccgaggagttac                                                                >  2:400263‑M2/63‑245 (MQ=255)
                                                                                                                                                                                        tacgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAGGCATTACg                                                               <  2:116652‑M2/190‑1 (MQ=255)
                                                                                                                                                                                          cgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTg                                                                                                                                                                                              <  2:306470‑M2/63‑1 (MQ=255)
                                                                                                                                                                                          cgggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTg                                                                                                                                                                                              >  1:306470‑M2/59‑121 (MQ=255)
                                                                                                                                                                                            ggcactatttattcaaaactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAGGCATTACGACCt                                                           >  1:17385‑M2/57‑250 (MQ=255)
                                                                                                                                                                                                            aactctgacgaaaaacaggctgtcgtcagttttgacgtgaGGAAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTATTGCCGAGGCATTAAGACCTAATAACGGCGTGTCCgg                                          >  2:250697‑M2/41‑251 (MQ=255)
                                                                                                                                                                                                                     gaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTg                                  >  1:232325‑M2/32‑250 (MQ=255)
                                                                                                                                                                                                                     gaaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGa                                 <  1:264203‑M2/220‑1 (MQ=255)
                                                                                                                                                                                                                      aaaaacaggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTg                                  >  2:3348‑M2/31‑249 (MQ=255)
                                                                                                                                                                                                                             ggctgtcgtcagttttgacgtgaGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAaata                          >  1:3716‑M2/24‑250 (MQ=255)
                                                                                                                                                                                                                                                   aGGTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATGATCGGCCAGTTTCGCTAt   >  1:29083‑M2/2‑251 (MQ=255)
                                                                                                                                                                                                                                                    ggTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATGATCGGCCAGTTTCGCTATc  <  2:18686/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    ggTAAGGGGACAGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTCCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAGGTTGGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATGATCGGCCAGTTTCGCTATc  <  1:224618/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                           
TCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCTTCATCTTCAATGCCTTTTTTCATATCTACCCAAAATGGGTTGGAGAGGGTTTTCAATACGACAGCATATTCGGCGGCAGCAAAAGCGCTGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGACAAAAAAAGCGTCCAGCAAAGTTAGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATC  >  NC_000913/4311813‑4312308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: