New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	62 (1.210)	55/490	0.0	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 2406787	0 (0.000)					intergenic (‑146/‑774)	lrhA/alaA	DNA‑binding transcriptional dual regulator LrhA/glutamate‑‑pyruvate aminotransferase AlaA

CACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTACCCCAAAA  >  NC_000913/2406537‑2407032                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                      cacaGCCGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCGCTTACTGGCGGCTCATACTGGGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATTTGCCTCCCTGGCAGTTTCATCCGGAGCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGc                                                                                                                                                                                                                                                       <  1:1550/251‑1 (MQ=255)    cgcGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCCTATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGCGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCCGTTTCATCCGGACCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggg                                                                                                                                                                                                                                                    <  1:294002‑M2/250‑4 (MQ=255)     gCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggta                                                                                                                                                                                                                                                   >  1:284001‑M2/1‑247 (MQ=255)       ggCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaat                                                                                                                                                                                                                                                 >  2:6243‑M2/1‑245 (MQ=255)       ggCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaat                                                                                                                                                                                                                                                 >  2:262994‑M2/1‑245 (MQ=255)        gCAGCTGCGGCATCAAAAGTGTTCAGATCGGCAACAGCAACAAATGCTCTCAGCAGATCGAGGTCGAGGTTAAGTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCTGCTCATCCTGAGCTGGTTAATTCTGGGAACACACAAACAAGCAATTCCATTTGTAAGGTGCCTCCCTGGCAGTTTCATCCGCAACCCGGACGAATGTAAAAATGCATATGAGTTGTCCTAAAAAAGCtgtaatg                                                                                                                                                                                                                                                <  2:23859‑M2/251‑8 (MQ=255)         cAGCTGCGACAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCCGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatg                                                                                                                                                                                                                                                <  2:376567‑M2/250‑8 (MQ=255)                  cagcaAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaactt                                                                                                                                                                                                                                      >  1:323016‑M2/1‑234 (MQ=255)                   agcaAATGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttt                                                                                                                                                                                                                                     <  1:126549‑M2/251‑19 (MQ=255)                     caAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATAATGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTAATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttatt                                                                                                                                                                                                                                   <  2:67877‑M2/251‑21 (MQ=255)                      aaaaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattg                                                                                                                                                                                                                                  <  1:91088‑M2/251‑22 (MQ=255)                         aGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgat                                                                                                                                                                                                                                <  1:56943‑M2/250‑24 (MQ=255)                                aGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgtttt                                                                                                                                                                                                                        <  1:349592‑M2/251‑32 (MQ=255)                                 gATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgtttt                                                                                                                                                                                                                        <  1:73572‑M2/250‑32 (MQ=255)                                  aTCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttat                                                                                                                                                                                                                      <  1:320363‑M2/251‑34 (MQ=255)                                    cGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatg                                                                                                                                                                                                                     >  2:410797‑M2/1‑216 (MQ=255)                                         acagcaacaAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGAAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttc                                                                                                                                                                                                                  <  1:308678‑M2/248‑38 (MQ=255)                                                caaATGTTCTAAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGAAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                                                                                                                                        <  2:123610‑M2/251‑48 (MQ=255)                                                          cagcagATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATATGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac                                                                                                                                                                                                 >  1:446175‑M2/1‑194 (MQ=255)                                                                    aggtcgaggtTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                                                                                                                                    <  1:372103‑M2/251‑68 (MQ=255)                                                                               aaTTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt                                                                                                                                                                         <  2:371974‑M2/251‑79 (MQ=255)                                                                                 ttATCGGACGATTTGCCCTTATCATATATTATCACTTACTGGCGGCTCAGACTGAGCTGGGTCATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCCGTTTCATCCGGAACCCGGACGAACGTAAAAATGCATATGAGTTGCACTAACAAAGCggtaatgactccaacttcttgctagtgttttatgttcagataatgcccgattactttgtcatgcagctccatcgattttg                                                                                                                                                                       <  2:53525‑M2/251‑81 (MQ=255)                                                                                          gATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                                                                                                                              >  1:376567‑M2/1‑162 (MQ=255)                                                                                              tGCACTTATCATATATTGTCACTTATTGGCTGCTCATACTGAGCTGGTTAATGCTGTGTACACTCAAACAAGCAAGTCCATTTGTAATGTGCCTCCCTTGCAGTTTCATCCGGAGCCCGTACGAAAGTAAAAATGCATATGAGTTGCTCTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgccctctgtcgttgtcatgcagctccaccgattttgagaacgacagcg                                                                                                                                                           >  2:321683‑M2/1‑158 (MQ=255)                                                                                                cACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact                                                                                                                                                        >  1:156840‑M2/1‑156 (MQ=255)                                                                                                   ttATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                                                                                                                                     <  2:261550‑M2/251‑99 (MQ=255)                                                                                                   ttATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                                                                                                                                     <  1:125587‑M2/251‑99 (MQ=255)                                                                                                    tATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                                                                                                                                     >  2:56943‑M2/1‑152 (MQ=255)                                                                                                      tCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgctagtgttttatgttcagatactgcccgatgactttttcatgcagctcccccgattttgagaacgacagcgacttccgtc                                                                                                                                                  <  2:209211‑M2/251‑102 (MQ=255)                                                                                                                         ggcggcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctg                                                                                                                               <  2:8985‑M2/251‑121 (MQ=255)                                                                                                                          gcggcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc                                                                                                                              >  1:125675‑M2/1‑130 (MQ=255)                                                                                                                                      gAGCTGGTTAATGCTGTGCCCACACAAACAAGCAATTCCATGTGTAATGTGCCTCCCTGGCCGTTTCATCCGGAACCCGGACGACAGTACAAATGCATATGAGTTGCACTAAAAAAGCggtaatgaccccaacttattgatagtgttttattttcagataatgcccgatgactttgtcatgcagctccacctatttggagaacgacattgacttccggcccagccgtgccaggtgctgccgcagattca                                                                                                                    >  2:298643‑M2/1‑118 (MQ=255)                                                                                                                                            gTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc                                                                                                            >  1:286866‑M2/1‑112 (MQ=255)                                                                                                                                               aaTGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgccttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgc                                                                                                         <  2:408750‑M2/251‑143 (MQ=255)                                                                                                                                                   cTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctca                                                                                                      <  1:341210‑M2/250‑146 (MQ=255)                                                                                                                                                          cacacaAACAAGCAATTCCATTTGTAATTTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctg                                                                                              >  2:327328‑M2/1‑98 (MQ=255)                                                                                                                                                                   aaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgatcagataatgcccgatgactttgtcatgcagctccaccgcttttgagaacgccagcgacttccgtcccagccgtgccaggtgctgcctcagattcagtttatgccgatcaattcgctgcgtttatcc                                                                                     <  2:286821‑M2/251‑163 (MQ=255)                                                                                                                                                                    aGCAATGCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACTCGGACGAAAGTAAAAATGCATTTGAGTTGCACTAAAAAAGCggtaatgactccaacttatttatagtgttttatgttcagataatgcccgatgactttgacatgcagctcccccgattttgagaacgatagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgc                                                                                    >  2:173296‑M2/1‑88 (MQ=255)                                                                                                                                                                      cAATTCCAGTTGTAATGTGCTCCCCTGGCAGGTTCATCCGGGACCCGGACGAAAGTAAAAATGCTTATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatattgtgttatgttcagataatgcccgatgactttgtcctgcagctccacctattttgagaacgacagcgacttccgtcccagccgtgtcaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgctt                                                                                  >  2:234421‑M2/1‑86 (MQ=255)                                                                                                                                                                       aaTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttg                                                                                 <  1:212106‑M2/251‑167 (MQ=255)                                                                                                                                                                            cATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgat                                                                            >  1:408750‑M2/1‑80 (MQ=255)                                                                                                                                                                             ttttgTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgatt                                                                           <  1:85465‑M2/250‑173 (MQ=255)                                                                                                                                                                             aTTTGTAATGTGCCTCCCTGTCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacgtagtgatagtgctttatgttcagataatgcccgatgactttgtcatgcatctccaccgattttgagaacgtcagcgacttccgtcccagccgtgccgggtgctgcatcagattcatgttatgccgctcaattcgctgcgtatctcgcttgctgatt                                                                           >  2:385741‑M2/1‑79 (MQ=255)                                                                                                                                                                               ttGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                                                                                                                                                                      <  1:446612‑M2/126‑50 (MQ=255)                                                                                                                                                                               ttGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                                                                                                                                                                      >  2:446612‑M2/1‑77 (MQ=255)                                                                                                                                                                                tGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattac                                                                         >  1:8985‑M2/1‑76 (MQ=255)                                                                                                                                                                                 gTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgt                                                                       <  1:366112‑M2/251‑177 (MQ=255)                                                                                                                                                                                   aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCAGATGAGGTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacgtccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtg                                                                      >  2:47483‑M2/1‑73 (MQ=255)                                                                                                                                                                                                ggCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttc                                                         <  2:256311‑M2/250‑191 (MQ=255)                                                                                                                                                                                                        gatCCGGAACCCGGACGAAAGGAAAAATGCATATGAGTTGCACTAAAAAAGCtgtaatgactccaacttattgatagtgttttatgttcagatactgcccgctgactttgtcatgcagctccacctagttgtagagcgagagcgactgccgtcccggccgtgccgggtgctgcctcagagtcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcggtat                                                >  2:418980‑M2/2‑52 (MQ=255)                                                                                                                                                                                                               aaCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgctgctttcccttcaggcgggattcataca                                         >  1:305826‑M2/1‑45 (MQ=255)                                                                                                                                                                                                                  ccGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcacagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgaagctttcccttcaggcgggattcatacagcg                                      <  2:140154‑M2/251‑210 (MQ=255)                                                                                                                                                                                                                        gAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagc                                <  2:225911‑M2/251‑216 (MQ=255)                                                                                                                                                                                                                         aaaGGAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagcgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggagctgcatcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgagcagctttcccttcaggcgggattcatcaaccggccagcc                               <  2:418738‑M2/251‑217 (MQ=255)                                                                                                                                                                                                                          aaGTAAAATTGCATATGAGTTGCACTAAAAAAGCggtactgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagcc                               <  2:312427‑M2/250‑217 (MQ=255)                                                                                                                                                                                                                            gTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaactacagcgccttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatc                            >  1:23859‑M2/1‑32 (MQ=255)                                                                                                                                                                                                                            gTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatc                            >  1:131612‑M2/1‑32 (MQ=255)                                                                                                                                                                                                                              aaaaaTGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccg                          >  2:193999‑M2/1‑30 (MQ=255)                                                                                                                                                                                                                                        atGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatat                >  1:257013‑M2/1‑20 (MQ=255)                                                                                                                                                                                                                                           aGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcacttcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccctatcac             <  2:179097‑M2/251‑235 (MQ=255)                                                                                                                                                                                                                                              tGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcacca           >  1:385400‑M2/1‑14 (MQ=255)                                                                                                                                                                                                                                                      aaaaGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaagg  >  1:239342‑M2/1‑6 (MQ=255)                                                                                                                                                                                                                                                      aaaaGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaagg  >  1:349146‑M2/1‑6 (MQ=255)                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                      CACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTACCCCAAAA  >  NC_000913/2406537‑2407032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.