| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,867,599 | Δ9,908 bp | yidQ–yidB | yidQ, yidR, cbrA, dgoT, dgoD, dgoA, dgoK, dgoR, yidX, yidA, yidB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3867599 | 3877506 | 9908 | 32 [0] | [0] 32 | yidQ–yidB | yidQ,yidR,cbrA,dgoT,dgoD,dgoA,dgoK,dgoR,yidX,yidA,yidB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3867598 | 0 (0.000) | 32 (0.620) | 31/492 | 0.4 | 100% | intergenic (‑176/‑130) | ibpA/yidQ | small heat shock protein IbpA/DUF1375 domain‑containing putative lipoprotein YidQ |
| ? | NC_000913 | 3877507 = | 0 (0.000) | intergenic (‑42/+198) | yidB/gyrB | DUF937 domain‑containing protein YidB/DNA gyrase subunit B | |||||
AAGTGGTTAAACAAACGGTCAAATCCAATAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAGAAATGTGTTGTTAGCGTTCATGATATGCAGCGGAATGACATTACTCGGAGGATGCTCCAGCGTGATGTCCCATACCGGAGGGAAAGAAGGAACGTATCCCGGCACCCGC > NC_000913/3867355‑3867844 | aaGTGGTTAAACAAACGGTCAAATCCAAGAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAACCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAATTGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGTTCTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagat < 2:407822‑M1/249‑6 (MQ=255) aaacGGTAAAATCCAATAGCAGAAGGGTACAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTACTGAAATCAGCGAGAATGTCAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGACGCGTCCTCCTCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAACCTTATCAGCGGACTTTTTTTTTCAGTTTATGTTTTATTGCAGAGtagtctttcgggttgtta > 2:90462‑M1/1‑232 (MQ=255) aTAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcaga > 2:196790‑M1/1‑217 (MQ=255) gCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcgg > 1:141897‑M1/1‑201 (MQ=255) aaaTTAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTTGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctcc < 1:379746‑M1/251‑59 (MQ=255) aaaTCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctcc < 2:196882‑M1/251‑59 (MQ=255) gTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgccctttt > 1:50362‑M1/1‑185 (MQ=255) cATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGgagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctacgcccttttcttat > 1:205301‑M1/1‑179 (MQ=255) cAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttct < 2:50362‑M1/251‑79 (MQ=255) aGCTCCTGAAATCAGCGAGAATGGAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGGCCTCATCGGCTACGATGAAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGGCTATTGCATAGtagatttgcgggatgataattgcggcttgcagaaataaaaagggcggagatgctctccgccctgttcttatagcttcttgcc > 1:236891‑M1/1‑169 (MQ=255) gCGAGAATGTAAGACCTTCCACAATGGCCAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAATTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtga > 1:341294‑M1/1‑155 (MQ=255) gagaATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacg > 1:173836‑M1/1‑153 (MQ=255) agaATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgc > 1:146805‑M1/1‑152 (MQ=255) aTGTAAGACCGTCCACAATGGACAGGTCAGGTAGCCAGAACACCCAGCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGATCTTTTCAAGCCTTATCAGCGGACTGTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgcctt < 2:36213‑M1/251‑103 (MQ=255) aGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGAGGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccg < 2:189352‑M1/251‑108 (MQ=255) tGGACAGGTCAGGGAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagacgatctccgcccttttcttatagattcttgcaggatgcggcgtgaaccccttttccggcctacaaaatcc > 2:447875‑M1/1‑131 (MQ=255) tcaggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaatt > 1:172143‑M1/1‑123 (MQ=255) gcgcGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtaaatttgcgggatgctaattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaaagccttatccgtctttcacaataatcaaaattcaataaagttaaaaattttcct > 2:325466‑M1/1‑99 (MQ=255) cgTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcc > 1:156507‑M1/1‑96 (MQ=255) cTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaatgccttatccggcctacaaaatcatgaaaattcaat < 1:295452‑M1/224‑133 (MQ=255) tCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggttgataattgcggattgcagaaataaaaagagcggagatgatctccgcccttttcttatagcatcttgccggatgcggcgtgaacgccttatcctgccttcaaaatcatggaaattaaataaattgcaaacatttctgaaccctgct > 2:263294‑M1/1‑91 (MQ=255) aTCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaataatgaaaattcaatacattgcaagattttcttaagcctgata > 1:159575‑M1/1‑89 (MQ=255) gATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgca < 2:115820‑M1/251‑172 (MQ=255) gTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatc > 1:353101‑M1/1‑77 (MQ=255) gAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcatgg > 1:76939‑M1/1‑62 (MQ=255) ccTTATCAGCGGACTTTTGTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagaggatctccgcccttttcttatagcttctttccggatgcggtgtgaacgccttatccggcctacaaaatcatgaaaattcaatacatggcaagattttcgtagtcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaaata < 2:383096‑M1/250‑206 (MQ=255) tATCAGCGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaaatatcg > 1:207808‑M1/1‑42 (MQ=255) cGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggttgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgtaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcatgcacgctcgcatggttagcgccattaaatatcgttattcg > 2:52646‑M1/1‑36 (MQ=255) cGGACTTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcttaggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaaatatcgatattcg < 1:388918‑M1/251‑216 (MQ=255) ggACTTTTTTTTTCAGTTTATGGTCTATTGAATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggcgatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatcccgcctacaaaatcatgaaaattcaatacattgcaagattttcgtcggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaaatatcgatattcgc > 1:126472‑M1/1‑35 (MQ=255) aTGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacataatcatgaaaattacatacattgcaagattttcgtaggcctgataagcgtagcgcctcaggcacgctcgcatggttagcgccattaaatatcgattatcgccgctttcatggcgttctct > 2:172632‑M1/1‑16 (MQ=255) aTAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgcccttaaatatcgatattcgccgctttcagggcgttctcttcaataaacgc > 2:383665‑M1/1‑4 (MQ=255) | AAGTGGTTAAACAAACGGTCAAATCCAATAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAGAAATGTGTTGTTAGCGTTCATGATATGCAGCGGAATGACATTACTCGGAGGATGCTCCAGCGTGATGTCCCATACCGGAGGGAAAGAAGGAACGTATCCCGGCACCCGC > NC_000913/3867355‑3867844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |