New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	194878 =	47 (0.910)	3 (0.060)	3/492	5.2	5.8%	intergenic (+34/‑25)	ispZ/ispU	small regulatory RNA IspZ/ditrans,polycis‑undecaprenyl‑diphosphate synthase [(2E,6E)‑farnesyl‑diphosphate specific]
	?	NC_000913	= 924246	51 (0.990)					coding (983/2277 nt)	clpA	ATP‑dependent Clp protease ATP‑binding subunit ClpA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGAACCACAATGTGTGGACGATGTGTTATCTGTTGATGCGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGTTAACGCTGTATGCCTTTAGTAGTGA  >  NC_000913/194630‑195120                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                     cgAACCACAATGTGTGGACGATGTGTTATCTGTTGATGCGAACGCGCGAGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAAc                                                                                                                                                                                                                                                    >  1:322045/1‑251 (MQ=255)  gAACCACAATGTGTGGACGATGTGTTATCTGTTTATGAGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAAGCCGGCTACAGAGAGTCGCGCTAGTTGTTAGCGTAGGGCTTTAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGATTACCGTAAAcc                                                                                                                                                                                                                                                   <  2:157150/251‑1 (MQ=255)            ggggggACGATTGGTTGTCTGTTGATGCGAACGCGAGTGAAATCGCCAGAAAAGAGGTTGTGGTTCTTGGAAGGTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGATTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAggg                                                                                                                                                                                                                                         <  2:302862/246‑1 (MQ=255)                ggACGATGTGTTATCTGTTGATGCGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATa                                                                                                                                                                                                                                     >  1:398773/1‑250 (MQ=255)                  aCGATGTGTTATCTGTTGATGCGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATaaa                                                                                                                                                                                                                                   >  1:42823/1‑250 (MQ=255)                       gtgtTATCTGTTGATGCGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAAcgc                                                                                                                                                                                                                             >  1:81498/1‑251 (MQ=255)                                gTTGATGCGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCTTGAtgttg                                                                                                                                                                                                                    >  2:271528/1‑251 (MQ=255)                                gTTGATGCGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGAtgt                                                                                                                                                                                                                      <  1:13545/249‑1 (MQ=255)                                         aaCGCGCGTGAAGTCGCCAAAAAAGAGGTGATGCGTCGCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGTCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTGTTTTTGTATAGGCTTCAGTATTCCTGAGTACAGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACt                                                                                                                                                                                                          >  2:24193/1‑251 (MQ=255)                                                           aGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGaaaaa                                                                                                                                                                                        <  2:212800/251‑1 (MQ=255)                                                              aaaGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCCCTTAGCGAAAAATTg                                                                                                                                                                                     <  2:26482/251‑1 (MQ=255)                                                                                  aaGCTGAGGATAATCCGGCTCCAGAGCGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCAATTAGCGAAAAATTGCCAGCGCATGGCTGCCGTc                                                                                                                                                                  >  2:383773/1‑250 (MQ=255)                                                                                    gCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATg                                                                                                                                                               <  1:262734/251‑1 (MQ=255)                                                                                          gATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCg                                                                                                                                                          >  1:417897/1‑250 (MQ=255)                                                                                                  ggCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATg                                                                                                                                                 <  1:88895/251‑1 (MQ=255)                                                                                                     tACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGAc                                                                                                                                              >  1:243261/1‑251 (MQ=255)                                                                                                           gagTCGCGTTATTTGTTAGTGTAGGGCTTCAGTGATATAGGCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAAt                                                                                                                                        <  2:292686/251‑1 (MQ=255)                                                                                                           gagTCGCGATATTTGTTAGCGTAGGGCTTTAGTGATATCGTCTTCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAACCCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCATCCACTTAGCGAAAAATTGCCAGCTCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAAt                                                                                                                                        <  2:287596/251‑1 (MQ=255)                                                                                                             ggcgcgCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATgg                                                                                                                                      <  2:5815/249‑1 (MQ=255)                                                                                                               cgcgCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCACTATGGACGGCAATGGc                                                                                                                                     <  2:284697/250‑1 (MQ=255)                                                                                                                  gcTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAGCCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCt                                                                                                                                 <  1:383773/251‑1 (MQ=255)                                                                                                                  gcTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCt                                                                                                                                 >  1:392783/1‑251 (MQ=255)                                                                                                                     aTTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTgg                                                                                                                               <  1:63218/250‑1 (MQ=255)                                                                                                                            aGCGTAGGGCTTCAGTGATATATTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTCTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATTGCCGCTGGGCaaaaaa                                                                                                                       <  1:63246/251‑1 (MQ=255)                                                                                                                               gtcgggCTTCAGTGATATAGGCTGCGCCATCTGATCGGAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGTCTTTTTTTTGTATATGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑ACAGGGAATAAAAAACGCGTGATGTTGACTG‑CTACTCAACCACTAAGCGAAAAATTGCAAGCGCATGGCTGCCGTCATGATGCGCTCATTATGGACGGCAATGGACTCTggggaagaatgc                                                                                                                     >  1:87083/4‑241 (MQ=255)                                                                                                                               gTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGc                                                                                                                     >  1:87094/1‑250 (MQ=255)                                                                                                                                 aGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCaa                                                                                                                   <  2:92565/250‑1 (MQ=255)                                                                                                                                                       cgcCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGc                                                                                             <  2:262331/250‑1 (MQ=255)                                                                                                                                                               gATCGTAAGAAGTTGGCTTTATAAGGGCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAAAGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAgacg                                                                                    >  2:297154/1‑248 (MQ=255)                                                                                                                                                                aTCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCgg                                                                                   >  1:284734/1‑251 (MQ=255)                                                                                                                                                                                tttATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTccgc                                                                   >  1:228558/1‑251 (MQ=255)                                                                                                                                                                                            gATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTctct                                                       <  1:82614/251‑1 (MQ=255)                                                                                                                                                                                                 gctgTGGTTTTACACGGGTTTTTTTTGTATAGGCTTCAGTATTCCTGTGTACCGTAACCCCTG‑TCAGGGAATAAAAAACGCGTGAGGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGGCTCTTTTg                                                   <  2:312457/247‑1 (MQ=255)                                                                                                                                                                                                 gCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCTCTGGGCAAAAAAGCAAGGGACGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGc                                                  >  2:251907/1‑251 (MQ=255)                                                                                                                                                                                                 gCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGc                                                  >  1:99704/1‑251 (MQ=255)                                                                                                                                                                                                    gTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGc                                               >  1:110072/1‑251 (MQ=255)                                                                                                                                                                                                              acGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGt                                     >  1:286409/1‑251 (MQ=255)                                                                                                                                                                                                              acGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGt                                     >  1:57556/1‑251 (MQ=255)                                                                                                                                                                                                                 gCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTAtt                                  >  2:181693/1‑251 (MQ=255)                                                                                                                                                                                                                     ttttttGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGTCGGCAATGGCCGCTGGGCAAAAAAGCAAGTGAAGATTCGTGCCTTTGGGCATAAAGCCTGGTCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAg                               <  1:187729/250‑1 (MQ=255)                                                                                                                                                                                                                          tGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACGTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGtt                          <  2:6521/250‑1 (MQ=255)                                                                                                                                                                                                                                 gCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGTTAACGCTGt                  >  1:443885/1‑251 (MQ=255)                                                                                                                                                                                                                                    tgaGTATTCCTGAGTACCGTAA‑CCCTGGTCAGGGAATAAAAAACGCGTGAGTTTGTCTG‑CTACTCAACCACGTAGGGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGTAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTGTGGGCAGAAATCCGGGGCAAAATCCGTTCGCCGGGCTGTCTCATTTGCTGCCAACAACGTTATTGAGGCGTTAACGCTGt                  <  2:86249/246‑1 (MQ=255)                                                                                                                                                                                                                                     cAGTATTTCTGAGTACCGTAACCCCTG‑TCAGGAAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGTCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGTTAACGCTGTATGc              <  2:292562/251‑1 (MQ=255)                                                                                                                                                                                                                                       gTATGCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGT‑TGTCTCATCAACCACCTAGCGAAAAATTGCCAGCGCATGGCTGGCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGGCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGTGAACGCTGTATGCCt            <  2:156572/251‑1 (MQ=255)                                                                                                                                                                                                                                         aTTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGTTAACGCTGTATGCCtt           <  1:13714/250‑1 (MQ=255)                                                                                                                                                                                                                                                 gTACCGTAAACCCTG‑TCAGGAAATAAAAAACGCGTGAGGTGTTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGGTCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGTTAACGCTGTATGCCTTTAGTAGTGa  <  2:445591/251‑1 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                     CGAACCACAATGTGTGGACGATGTGTTATCTGTTGATGCGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGAGGATAATCCGGCTACAGAGAGTCGCGCTATTTGTTAGCGTAGGGCTTCAGTGATATAGTCTGCGCCATCTGATCGTAAGTAGTTGGCTTTATAAGGTCAGATATGCCGTGGTTTTACACGGCTTTTTTTTGTATAGGCTTCAGTATTCCTGAGTACCGTAAACCCTG‑TCAGGGAATAAAAAACGCGTGATGTTGTCTG‑CTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGTTAACGCTGTATGCCTTTAGTAGTGA  >  NC_000913/194630‑195120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.