Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,435,7270GA26.4% 108.8 / 20.2 53intergenic (‑108/+33)uspF/ompNuniversal stress protein F/outer membrane porin N
Reads supporting (aligned to +/- strand):  ref base G (36/3);  new base A (0/14);  total (36/17)
Fisher's exact test for biased strand distribution p-value = 2.83e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GTAGGGCAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGTCTGCACCACCCGCAGCGTGC  >  NC_000913/1435482‑1435973
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      
gtagGGCAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGaaaa                                                                                                                                                                                                                                                    >  2:270904/1‑250 (MQ=255)
    ggCAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGccc                                                                                                                                                                                                                                               >  1:429326/1‑251 (MQ=255)
       aGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGcc                                                                                                                                                                                                                                            >  1:7170/1‑251 (MQ=255)
          gAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCAt                                                                                                                                                                                                                                          >  2:122997/1‑250 (MQ=255)
             ggTATTAACGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGCCAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTCACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAACGGAGGAAGAATAAGCAGAAAAAGCCCACCATAAc                                                                                                                                                                                                                                       >  2:306029/1‑250 (MQ=255)
                 ttACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCgg                                                                                                                                                                                                                                  >  1:273286/1‑251 (MQ=255)
                   aCCGTCAGGAAATGACCCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAACCACGCGTTGATTTAATTCTAAACCGAAAATATCGATAGGGACAAGAATCGTTCTGTTCAAAAAACC‑TCCTGTTTT‑AGTATCCGCAAAAAGTGAAACGCCAGATGCCACTTTTTG‑TGTAATGA‑GGG‑AGTTCACATTTTTAATTTAGATTAAGGGAGGAAAAATAAGCAAAAAAAGCCCGCCATAACAGCGGGc                                                                                                                                                                                                                                <  1:146705/251‑1 (MQ=255)
                     cGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGc                                                                                                                                                                                                                                >  2:399883/1‑249 (MQ=255)
                                       tGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGCTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGAATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCAGCCATAACAGCGGGCAGGAGGATTTAGacatgat                                                                                                                                                                                                             >  2:274155/1‑244 (MQ=255)
                                         catcatCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGAt                                                                                                                                                                                                             >  2:199251/1‑248 (MQ=255)
                                         caacaccattCTTTGCCTCTTCCTCAGCGTGGATAATCACGCGTGGATTTAATACGAAATCGAAAATATGGATGGGAACAACACTTTTTCTGTTCA‑AAACCC‑CCCTTTTTTTGGTTCCCGAATAAATTTTAACGCAAGATCACATTTTTTT‑TGTAAGGC‑CGG‑TGTTCACATTTTTAATTTAAAAAAAAGGAGAAAAAATAAGAAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGAt                                                                                                                                                                                                             <  1:199251/239‑1 (MQ=255)
                                            catcaATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAAcc                                                                                                                                                                                                        >  2:592964/1‑250 (MQ=255)
                                               aaatttttccctctcccccagcGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGAAAAGAATCGTTCTGTTCATAAAACC‑TCCTTTTTT‑ATTACCCGCAAAAAGTGTAACCCCAGATGACTTTTTTTG‑TGTAATGC‑CGG‑AGTTCAAATTTTTAATTTAGATAAAGGGAGGAAAAAAAAGAAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGAc                                                                                                                                                                                                    <  1:399883/230‑1 (MQ=255)
                                                  tttttcccttttCCTCAACGTGGCTAATCCCTCTTTGATTTAATTCTAAATCGAAAATATCGATAGGGACAAGAATCTTTTTGTT‑AAAAAACC‑CCCTTTTTTTAGTCTCCGAAAAAAGTGAACCGCCAGATGACCCTTTTTG‑TGTAAGGA‑GGG‑AGTTCACATTTTAATTTTAGAAAAAAGGAGGAAAAATAAGAAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCt                                                                                                                                                                                                  <  1:159980/240‑1 (MQ=255)
                                                       gCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAAAC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCg                                                                                                                                                                                            >  2:450560/1‑251 (MQ=255)
                                                       cccttttCCTCAACGTTTCTAACCACGCGTAGATTTAATTCTGAATCGAAAATATCGATAGGGAAAAAAATCTTTCTGTTCAAAACCCC‑TCCTTTTTT‑AGTTCCCGAATAAAGTGTAACCCCAAATAACTTTTTTTG‑TGTAATGA‑CGT‑AGTTCACTTTTTTATTTAAGAACAAAGGAGAAAAAAAAAGAAAAAAAACCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCg                                                                                                                                                                                            <  2:267711/246‑1 (MQ=255)
                                                          tctccctaaacggggatAATCCCGCGTTGAGTTAATTCAGAAGCGAAAATATGGAGAGGAAAAAAAATCGTT‑TTTTAAAAAAACCCTCCTTTTTT‑ATTACCCAAAAAAAGTAAAACGCAAGATGACTTTTTTGG‑TGTAAGGA‑CGG‑AGTTCACTTTTTTATTTAAAATAAAGGGAGAAAAAAAAAGAAAAAAACGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCa                                                                                                                                                                                                       <  2:216336/221‑1 (MQ=255)
                                                          tctTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCa                                                                                                                                                                                                       >  1:216336/1‑237 (MQ=255)
                                                                        gCTAATCACGCGTTGAGTTAATTCTGAATCGGAACTATCGATAGGGACAAGAATCGATCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGCCACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCAGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACGAGACCTAAAGAGACAATATCATCgga                                                                                                                                                                              >  1:226984/1‑247 (MQ=255)
                                                                             tCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGc                                                                                                                                                                      >  2:420495/1‑251 (MQ=255)
                                                                                    ttGAGTTAATTCTGAATCGAAAATATCGATAGGGAAAAGAATCTTTCTGTTAAAAAACCC‑TCTTGTTTT‑AGTCCCCGCATAAGGTGTACCGCCAGATGACTTTTTTTG‑TGTAATGA‑CGG‑GTTTCACATTTTAAATTTAAAACAAAGGAGAAAAAATAAGAAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTgg                                                                                                                                                                <  1:634323/250‑1 (MQ=255)
                                                                                     ggAGTTATTTGTGAAGCGGAAATATAGAAAGGGAAAAGAATTGTTTTGTTAAAAAACCC‑CCCTGTTTT‑AGTACCCGCAAAAAGTATAACGCAAGATGCCGTTTTTTT‑TGAAATGA‑GGG‑ATTTCAATTTTTTAATTTAGATAAAAGGAGAAAAAATAAGAAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCa                                                                                                                                                              <  1:270904/250‑1 (MQ=255)
                                                                                         ttAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGt                                                                                                                                                          >  2:307457/1‑251 (MQ=255)
                                                                                                                    ggACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGCGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGt                                                                                                                               >  1:111157/1‑251 (MQ=255)
                                                                                                                      aCAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTg                                                                                                                             >  2:30743/1‑251 (MQ=255)
                                                                                                                            aTCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGAtttt                                                                                                                        >  2:82933/1‑250 (MQ=255)
                                                                                                                               gTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTtat                                                                                                                      >  2:87194/1‑249 (MQ=255)
                                                                                                                                                         t‑AGTATCCGCAAAAAGTTAAACGCAAGAGGACCTTTTTTG‑TGTAAGGA‑CGG‑AGTTAACATTTTAAATTTAGATAAAGGGAGAAAAAAAAAGAAAAAAAGGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTa                                                                                            <  1:315704/250‑1 (MQ=255)
                                                                                                                                                           aGTATCCGCATAAAGTGTAACGCCAGATGACCCTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCGGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAGGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCaaggaaggggaccaggtttttatt                                                                                          >  2:45706/1‑229 (MQ=255)
                                                                                                                                                            gTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTg                                                                                         >  2:245821/1‑251 (MQ=255)
                                                                                                                                                              atccacaaaaattgtACCGCAAGATGACACTTTTGG‑GGTAATGA‑CGG‑ATTACACATTTTAAATTAAGAGAAAGGGAGAAAAAATAAGCAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGaa                                                                                       <  1:133943/239‑1 (MQ=255)
                                                                                                                                                                ccgaaaaaaGTGAAACCCCAGATGATTTTTTTGG‑TGTAAGGA‑GGG‑ATTTCACTTTTTTATTTAAAAAAAAAGGAGAAAAAAAAAGAAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAAt                                                                                     <  1:71711/245‑1 (MQ=255)
                                                                                                                                                                 cGCAAAAAGTGAAACGCAAGAGGACTCTTTTTG‑TGTAATGA‑CGG‑ATTTCACATTTTTATTTTAGATCAAAGGAGGAAAAAAAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATa                                                                                    <  1:592964/251‑1 (MQ=255)
                                                                                                                                                                    aaaaaGTGTAACGCAAGAT‑AAATTTTTTGGTGTAA‑GA‑CGGGAGTTCACTTTTTTAATTAAGAAAAAAGGAGAAAAAAAAAGAAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTa                                                                                 <  2:141385/249‑1 (MQ=255)
                                                                                                                                                                       aaGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAAAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGt                                                                              >  2:629057/1‑251 (MQ=255)
                                                                                                                                                                        aGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTc                                                                             >  1:96207/1‑251 (MQ=255)
                                                                                                                                                                            tAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCgcgc                                                                         >  2:302126/1‑251 (MQ=255)
                                                                                                                                                                             accgctggatgcacttttttG‑TGTAATGAGTGG‑A‑TTCACTTTTTTAATGTAAAAAAAAGGAGGAAAAATAAGCAAAAAAGGTCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGcc                                                                        <  1:45706/236‑1 (MQ=255)
                                                                                                                                                                                gCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAat                                                                     >  1:367138/1‑251 (MQ=255)
                                                                                                                                                                                        actttttttG‑TGAAATGA‑GGG‑AGTTCACTTTTTAAATTAAAAAAAAAGGAGAAAGAAAAAAAAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGt                                                             <  1:420495/247‑1 (MQ=255)
                                                                                                                                                                                          acTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTAt                                                           >  1:642286/1‑251 (MQ=255)
                                                                                                                                                                                             ttttG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTAttt                                                         >  2:264946/1‑250 (MQ=255)
                                                                                                                                                                                                         gA‑CGG‑AGTTCATTTTTTTAATTAAAACAAAAGGAAGAAAAAGAAGAAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTCTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCttt                                             <  1:74747/251‑1 (MQ=255)
                                                                                                                                                                                                            cGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGAACTAAAGCGACAATATCATCGGTAGAGATGCAATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTAAACGTAGGAGGACATGTTTTTATTGAAATAGTAAGTCGCGCAAATAACGGCGTATTTAAACAGATCTTTat                                           >  1:573715/1‑251 (MQ=255)
                                                                                                                                                                                                             gg‑AGTTCACATTTTTAATTTAGATCAAAGGAGGACGAATAAGCAGAAAAAGCCCGACATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGACATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGAGGACATGTTTTTATTGACATAGTAAGTCGCACCAATATCGGCGTATTTAACCAGGTCTTTatc                                          >  2:586528/1‑251 (MQ=255)
                                                                                                                                                                                                                  ttCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTatcatc                                       >  2:222371/1‑250 (MQ=255)
                                                                                                                                                                                                                    agcgtttttAATTTTGAGCAAGTGGGGAATAATAAGTAGAAAACGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGGCCTAGAGCGACAATATCAACGGTAGAGATGCTATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGTTTGATTTTATAGTCAACGTAGTTGGACATGTTTGTATTGGAATAGTAAGTCGCTCCATTATCCGCGTATTTGACCAGATCTTTATCTTCaa                                     <  2:540824/246‑1 (MQ=255)
                                                                                                                                                                                                                             aaTTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCgg                           >  1:243648/1‑251 (MQ=255)
                                                                                                                                                                                                                                        aaGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGTCTGcac                >  1:456552/1‑251 (MQ=255)
                                                                                                                                                                                                                                          ggaggaAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGTCTGcaccc              >  1:287603/1‑250 (MQ=255)
                                                                                                                                                                                                                                                    tAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGTCTGCACCACCCGCAGCGt    >  1:374891/1‑251 (MQ=255)
                                                                                                                                                                                                                                                     aaGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAACATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGTCTGCACCACCCGCAGCGTg   >  1:26981/1‑251 (MQ=255)
                                                                                                                                                                                                                                                      aGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGTCTGCACCACCCGCAGCGTGc  >  2:484484/1‑251 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      
GTAGGGCAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACC‑TCCTGTTTT‑AGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTG‑TGTAATGA‑CGG‑AGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGTCTGCACCACCCGCAGCGTGC  >  NC_000913/1435482‑1435973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑