| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,640,057 | Δ7,591 bp | [rrrQ]–[dicC] | 18 genes [rrrQ], [ydfR], essQ, ynfU, cspB, cspF, ynfS, ydfT, ydfU, rem, hokD, relE, relB, ydfV, flxA, ydfW, ydfX, [dicC] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1640057 | 1647647 | 7591 | 68 [0] | [1] 70 | [rrrQ]–[dicC] | [rrrQ],[ydfR],essQ,ynfU,cspB,cspF,ynfS,ydfT,ydfU,rem,hokD,relE,relB,ydfV,flxA,ydfW,ydfX,[dicC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1640056 | 0 (0.000) | 68 (0.860) | 64/494 | 0.1 | 99.3% | coding (2/534 nt) coding (310/312 nt) |
rrrQ ydfR |
putative lysozyme protein YdfR |
| ? | NC_000913 | 1647648 = | 1 (0.010) | coding (203/231 nt) | dicC | putative DNA‑binding transcriptional regulator DicC | |||||
GCTTATCCCTGGTGTCGATAGCCTTCCAGCGTTCAAATATCTTCACTCGATTAACGCCAAGCGCTCGCTGATCAATCGCGCCACCTTCATATGTGACACGCTGAACATCGATGTTCGGGCGCTCTTTCAAAGCCCAGAATGCTTCAGTGATTAATAT‑CGTCGCCTGCTCCTGTGTCATTCCTGGTCGACATATCCAGGCATCCAGAGCCTCACGAGCCTGTTCAGGAGTGATTTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAACTAACAAGATAGATGTTAAC > NC_000913/1647399‑1647897 | tatcacgctccatggcgttcacctggtcgcatttttccttcgacagtttcatattgggaaaaacggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcac > 2:563460‑M2/251‑251 (MQ=255) gcgttgacctggtcgcatttttccttagacagtttcatattgggatccacggtttttccatccaccactgtggcaccacgacagatggtacatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTc > 1:159022‑M2/237‑251 (MQ=255) gttgacctggtcgcatttttccttcgacagtttcatattgggaaaaacggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttacctgctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCtt < 2:29267‑M2/17‑1 (MQ=255) catttttccttcgacagtttcatattgggaaaaacggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATtcatc > 2:387234‑M2/222‑250 (MQ=255) tcgacagtttcatattgggaaaaacggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTgg > 1:512863‑M2/212‑251 (MQ=255) cagtttcatattgggaaaaacggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATc > 2:319570‑M2/208‑251 (MQ=255) agtttcatattgggaaaaacggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACtttgggctc > 2:434424‑M2/207‑247 (MQ=255) catattgggaaaaacggtttttccatccaccactgtggctcaccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTg < 2:407789‑M2/50‑1 (MQ=255) catattgggaaaaacggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTg > 1:178419‑M2/202‑251 (MQ=255) attgggaaaaacggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGa > 2:57616‑M2/199‑249 (MQ=255) gaaaaacggtttttccatccacccctgtggcaccccgacagatggtccaaatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcgCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTccc < 2:574161‑M2/58‑1 (MQ=255) aaaaacggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagaagatgcgccagcaccaagcagcgccagaacggcagccgacaggccgtagctgatctttggtgttcaCCCGCCCGCTGCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTcccc < 1:181956‑M2/59‑1 (MQ=255) ggtttttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGcc > 2:205544‑M2/187‑248 (MQ=255) ttccatccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGcc < 1:95135‑M2/69‑1 (MQ=255) tccaccactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCCGCTGCCTCCTGt > 2:103023‑M2/177‑251 (MQ=255) cactgtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttcttttgcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaccggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTGTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACg < 2:51321‑M2/80‑1 (MQ=255) ctgtggcaccccgacagatggtccataaacaagaaccatcgcggtaagccattgtgtggctacattctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagacgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCAACACAGATGCCTCCTGTAGACGc > 1:465119‑M2/170‑250 (MQ=255) tgtggcactccgacagatgggccatatgccagaaccatcgcggaatgccattgtgtggttacattctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATACACTTTGGGATCATACCGAAGCTCCCCTCCAGATGCCTCCTGTATACGCAt > 2:527084‑M2/169‑251 (MQ=255) gtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCAt < 1:57616‑M2/83‑1 (MQ=255) gtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATc < 1:84721‑M2/84‑1 (MQ=255) gtggcaccccgacagatggtccatatgccagaaccatcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATc < 1:255487‑M2/84‑1 (MQ=255) ggcaccccgacagatggtccttaggccagaaccatcgcggtatgccattgtgtggttaccttctttttctgccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATcg < 2:430063‑M2/85‑1 (MQ=255) acATATGTGACACGCTAAACTTCGTTGTGGGGGCGCTCTTTCAAAGCCAGGAATGCTCCAG‑GAATAAAATTCTTCGCCTCCCCTTGTGTCTAACCTGGTGGACATATCGAGGCACCCAGTCCCTAAGGAGCCGGTTCAGGAGTGATTTTCATTGTTAAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATcgcgc < 1:624003/250‑1 (MQ=255) acagatggtccataggccagaaccatcgcgttatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtttctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTc < 2:541272‑M2/95‑1 (MQ=255) aaccctcgcggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTcc < 2:573585‑M2/115‑1 (MQ=255) cggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATaa < 2:388771‑M2/123‑1 (MQ=255) ggtatgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATaa > 1:425595‑M2/128‑250 (MQ=255) atgccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCg > 1:145841‑M2/125‑251 (MQ=255) ccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGa > 1:420307‑M2/122‑249 (MQ=255) ccattgtgtggttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAg < 1:370861‑M2/130‑1 (MQ=255) gttaccttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAAt > 1:88334‑M2/112‑251 (MQ=255) accttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcacaaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTCTAAAGCGAAGCCAAACGAATAcc > 1:227661‑M2/109‑251 (MQ=255) accttctttttcgtccagaaactggtcaagtatctgaggagcagaggcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATAc < 1:205544‑M2/142‑1 (MQ=255) ttctttttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACctgc > 2:228508‑M2/106‑251 (MQ=255) tttttcgtccagaaactggtcaagtctctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGTATCATACTGAAGCTCCCTGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCtgctgc > 2:565460‑M2/103‑251 (MQ=255) tttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTgctgct < 1:319570‑M2/150‑1 (MQ=255) ttcgtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGGTCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGCATACCTGCGGCTtg > 2:319271‑M2/100‑251 (MQ=255) gtccagaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGc > 1:182325‑M2/97‑251 (MQ=255) gaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAgtt > 1:83872‑M2/92‑251 (MQ=255) gaaactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGAATCATACTGAAGCTCCCCTCCAGATGCCTCCTGTAGACGCATCTCGCGACCTTCGGGACCTAAATCCCCTTTCCAGCTATAACGCGAAGCCAAACGAATACCTGCTACTTGTGCACgtt > 2:375756‑M2/92‑251 (MQ=255) aactggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAgtttt < 1:62743‑M2/162‑1 (MQ=255) tggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAgttttgtt > 1:604345‑M2/87‑251 (MQ=255) ggtcaagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAgttttgttt > 1:470426‑M2/86‑251 (MQ=255) ggtcaaggatcggaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAgttttgttt < 2:234415‑M2/166‑1 (MQ=255) ggtaaagtatctgaggagcggatgcgccaccaccactaagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCAGCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAgttttgtt < 2:512863‑M2/165‑1 (MQ=255) aagtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTCTAAAGCGAAGCCAAACGCATACCTGCTGCTTGTGCAAGTTTTGTTTTTg > 2:543262‑M2/82‑250 (MQ=255) agtatctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgaccggcagtatctgatcttttgtgttcaCCCGCCCGATTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAAATAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGa > 1:499591‑M2/81‑250 (MQ=255) atctgaggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCg > 2:638031‑M2/78‑251 (MQ=255) gggagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATa < 1:380829‑M2/179‑1 (MQ=255) gagcagatgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATAc > 1:168764‑M2/71‑250 (MQ=255) atgcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAagag < 1:398796‑M2/187‑1 (MQ=255) gcgccagcaccaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGc < 1:264631‑M2/188‑1 (MQ=255) accaatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGtttt > 1:91280‑M2/55‑251 (MQ=255) caatcagcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTaa < 1:387234‑M2/199‑1 (MQ=255) aagcgccagaacggcagccgacaggccgtagctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCATGTAGACGCATCGCGCGACCTTCGGGAACAAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACATGCTGCTTGTGCAAGTTTTGTTTTTGACCCGAAATACAAAAGAGCGGCAGTTTTAAGCAt > 2:133202‑M2/49‑251 (MQ=255) agcgccagaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCAtt < 1:232364‑M2/204‑1 (MQ=255) agaacggcagccgacaggccgtatctgatcttttgtgttcaCCCGCCCGTTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAac < 2:133993‑M2/210‑1 (MQ=255) ccggcagccgacaggccgtatctgatcttttggtttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACAcc < 2:170542‑M2/213‑1 (MQ=255) acggccgccgacaggccgtatctgatcttttgggtccaCCCGCCCGCTTCGTCTTACGAGATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCACCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATAGCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGcatttaaaccagc < 2:159022‑M2/213‑6 (MQ=255) ggcagccgccaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACaa < 1:165678‑M2/182‑1 (MQ=255) ggcagccgacaggccgtatctgctcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGATTACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACaa > 2:165678‑M2/37‑218 (MQ=255) acaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATcc > 2:349077‑M2/29‑136 (MQ=255) acaggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATcc < 1:349077‑M2/108‑1 (MQ=255) aggccgtatctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGt > 2:186999‑M2/27‑251 (MQ=255) ggccgtatctgatcttgtgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTc < 2:26467‑M2/226‑1 (MQ=255) atctgatcttttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCAtaact > 1:380258‑M2/20‑251 (MQ=255) tttgtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAACTAACAagat > 2:342574‑M2/11‑250 (MQ=255) gtgttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGGTCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAACTAACAagataga < 1:319271‑M2/243‑1 (MQ=255) gttcaCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTGAGTCATAACTAACAAGATAGATg < 2:88334‑M2/245‑1 (MQ=255) cccgcccgCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAACTAACAAGATAGATGTTAAc > 1:242660/1‑250 (MQ=255) | GCTTATCCCTGGTGTCGATAGCCTTCCAGCGTTCAAATATCTTCACTCGATTAACGCCAAGCGCTCGCTGATCAATCGCGCCACCTTCATATGTGACACGCTGAACATCGATGTTCGGGCGCTCTTTCAAAGCCCAGAATGCTTCAGTGATTAATAT‑CGTCGCCTGCTCCTGTGTCATTCCTGGTCGACATATCCAGGCATCCAGAGCCTCACGAGCCTGTTCAGGAGTGATTTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGATGCCTCCTGTAGACGCATCGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAACTAACAAGATAGATGTTAAC > NC_000913/1647399‑1647897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |