| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,299,522 | Δ12,535 bp | mdtP–alsB | mdtP, mdtO, mdtN, ytcA, yjcS, alsK, alsE, alsC, alsA, alsB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4299522 | 4312056 | 12535 | 67 [0] | [0] 67 | mdtP–alsB | mdtP,mdtO,mdtN,ytcA,yjcS,alsK,alsE,alsC,alsA,alsB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4299521 | 0 (0.000) | 67 (0.850) | 58/494 | 0.2 | 100% | intergenic (‑155/+43) | fdhF/mdtP | formate dehydrogenase H/putative multidrug efflux pump outer membrane channel |
| ? | NC_000913 | 4312057 = | 0 (0.000) | intergenic (‑15/+44) | alsB/alsR | D‑allose ABC transporter periplasmic binding protein/DNA‑binding transcriptional repressor AlsR | |||||
GCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTTCTCGACGACGGGACCTGCCTGATACCCGCCGCCCAGCGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGC > NC_000913/4299281‑4299765 | gCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaagggg > 2:643219‑M1/1‑241 (MQ=255) cGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacag < 2:368334‑M1/251‑14 (MQ=255) ggACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagt > 1:57335‑M1/1‑237 (MQ=255) ggACGATTTTGCCGGTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTGTTTCATCGGTCTCGCTCCAGTTAAGCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACAGTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagt < 2:497441‑M1/251‑15 (MQ=255) cGATGTTGCCGTTAGCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaac < 2:930‑M1/251‑18 (MQ=255) gATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaact > 2:276860‑M1/1‑233 (MQ=255) aTTTTGCCGTTATCGACGCCCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATTCGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactc < 1:637989‑M1/251‑20 (MQ=255) aTTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactc < 2:638808‑M1/251‑20 (MQ=255) tttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactcc < 1:148443‑M1/250‑21 (MQ=255) tttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACGCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactcc < 2:199658‑M1/250‑21 (MQ=255) gTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatgg < 1:340633‑M1/251‑28 (MQ=255) tATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcg > 1:539379‑M1/1‑222 (MQ=255) tATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggc < 2:12595‑M1/250‑29 (MQ=255) aTCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcgg > 1:479320‑M1/1‑221 (MQ=255) aTCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACGCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcg < 2:175199‑M1/250‑30 (MQ=255) aTTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttctta < 1:6973‑M1/251‑47 (MQ=255) tGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttattt < 2:192717‑M1/250‑50 (MQ=255) aaCCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagc > 2:423370‑M1/1‑198 (MQ=255) aTAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgaga < 2:568822‑M1/251‑67 (MQ=255) ggggCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCTCATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaaga < 1:132464‑M1/251‑70 (MQ=255) gCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaat < 2:180779‑M1/251‑73 (MQ=255) ccGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaaca < 1:593578‑M1/251‑78 (MQ=255) gTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaat < 1:123568‑M1/251‑80 (MQ=255) gacgacTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattg < 2:357995‑M1/251‑82 (MQ=255) cTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGACTGTCGTCATTTTTGACGTGAggtaagggggcagtaactccgcgatggcggaat > 1:620460‑M1/1‑165 (MQ=255) cTTTTTGCATTGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTGTTGACGTGAggtaaggggacagtaacaccgcgatggcggaat < 2:620460‑M1/198‑34 (MQ=255) tttCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtagggggacagtaactccgcgatggcggaattaccttttgcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggtt < 2:467362‑M1/250‑90 (MQ=255) gTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccata < 1:37463‑M1/251‑99 (MQ=255) cGCTCCAGTTAATCAAAACACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggtatttcctttttcttatttcatcgcggcttgtgagaataaatcagcaattgcgccggttttttccatatt < 1:204582‑M1/249‑101 (MQ=255) cTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaat > 1:426566‑M1/1‑147 (MQ=255) aatcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttca > 1:568730‑M1/1‑134 (MQ=255) aTACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagc > 1:267482‑M1/1‑126 (MQ=255) cgcTCTCGACTACAGTATGCATCTTTTATGCCACATTTTTTGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggc > 1:547971‑M1/1‑121 (MQ=255) gcTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcg > 2:152405‑M1/1‑120 (MQ=255) cGACTACAGTATGCATCTTTTATGCCCCATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagagcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttacatgttgagatgggcgac > 2:546026‑M1/1‑115 (MQ=255) cGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacag < 2:479320‑M1/250‑136 (MQ=255) aCTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagaga < 1:361004‑M1/251‑139 (MQ=255) gCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagc < 2:618113‑M1/251‑149 (MQ=255) tttATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtc < 2:57335‑M1/248‑152 (MQ=255) tttATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtc < 1:643219‑M1/248‑152 (MQ=255) tttATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggagacagagacaaaacaagcgtca < 2:568730‑M1/249‑153 (MQ=255) ccACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttctt > 1:612605‑M1/1‑91 (MQ=255) ccACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattaccttgttctt < 2:612605‑M1/136‑46 (MQ=255) cacaTTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggtt > 1:45123‑M1/1‑90 (MQ=255) ttATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgt > 2:244214‑M1/1‑84 (MQ=255) aTGTGGGGTCATTCCCTGATATTACGGGCACTAGTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaa < 2:45123‑M1/251‑170 (MQ=255) cATTCCCTGATATTACGGGCACTATGTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGGGAggtaaggggacagtaactccgcgatggctgaattacctttttcttatttcagcgcgcctggggagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtcccgcaatgttggttgtaatattcttgc < 2:381977‑M1/251‑179 (MQ=255) tCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccg < 1:409437‑M1/250‑181 (MQ=255) cccTGATATTACGGGCACTATTTATTCCAAACTCTGACGAAAAACAGGCTGTCGTTAGGTGTGAAGTGAgggaaggggacagtacctccgcgatggctgaattacctttttcatatttcagcgcgcctggtgagaagaaatcaacaattgcgccggtttttcccatatgaagattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcgtgccgag < 2:330450‑M1/251‑183 (MQ=255) gATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcat > 1:450336‑M1/1‑65 (MQ=255) gATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggc < 2:547971‑M1/249‑185 (MQ=255) atTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatatcaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattac > 1:590784‑M1/1‑62 (MQ=255) cGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacc > 2:330992‑M1/1‑58 (MQ=255) atttattCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacg < 1:546026‑M1/251‑202 (MQ=255) atttattCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataac < 1:288329‑M1/250‑201 (MQ=255) aaaaCTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttcc < 1:529805‑M1/251‑210 (MQ=255) ctctGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgagg < 2:459037‑M1/221‑184 (MQ=255) ctctGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgagg > 1:459037‑M1/1‑38 (MQ=255) tGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctg > 1:280256‑M1/1‑35 (MQ=255) gtcgtcAGTTTTGACGTGAggtaaggggacagtaactccgcgaaggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcttttccggggctggtgagcaaataatat < 2:450336‑M1/250‑232 (MQ=255) cgtcAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgct > 2:45641‑M1/1‑17 (MQ=255) cgtcAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgat < 1:152405‑M1/251‑235 (MQ=255) cAGTTTTGACGTGAgttaaggggacagtaactccgcgatggcgtaattacctttttcttatttcagcgcgactggtgagaagaaatcaccaattgcgcctgttttttccatattaatattagcttgttcaatgttgagctgtgcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcgg < 1:493950‑M1/251‑238 (MQ=255) gACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattcatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgcggcattacgacctaataacggcgtttccgcggctggtgcgcaaataatatgatcggccagttt > 2:130126‑M1/1‑7 (MQ=255) gACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggccagtt < 2:518314‑M1/250‑244 (MQ=255) gACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggccagtt < 2:267482‑M1/250‑244 (MQ=255) gACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataataggatcggccagttt > 1:487345‑M1/1‑7 (MQ=255) | GCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTTCTCGACGACGGGACCTGCCTGATACCCGCCGCCCAGCGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGC > NC_000913/4299281‑4299765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |