Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,235,905 16376 bp→AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC yjbEmalM yjbE, yjbF, yjbG, yjbH, yjbT, psiE, xylE, malH, malG, malF, malE, malK, lamB, malM

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4235905 4252280 16376 50 [0] [0] 58 yjbE–malM yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE,malH,malG,malF,malE,malK,lamB,malM

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42359040 (0.000)41 (0.660)
+AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC
39/390 0.4 100% intergenic (+497/‑2) pgi/yjbE glucose‑6‑phosphate isomerase/uncharacterized protein YjbE
?NC_000913 4252281 = 0 (0.000)intergenic (+1807/‑225) malM/ubiC maltose regulon periplasmic protein/chorismate lyase

CTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCA  >  NC_000913/4252043‑4252528
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                       
ttaagtttatgatttttattgttatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGaa                                                                                                                                                                                                                                              >  1:288523‑M2/239‑250 (MQ=255)
 taagtttatgatttttattgttatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGaaa                                                                                                                                                                                                                                             >  1:66893‑M2/238‑250 (MQ=255)
  aagtttatgatttttattgttatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAAc                                                                                                                                                                                                                                           >  1:159454‑M2/237‑251 (MQ=255)
  aagtttatgatttttattgttatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAAc                                                                                                                                                                                                                                           <  1:565335‑M2/15‑1 (MQ=255)
                tattgttatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTgg                                                                                                                                                                                                                             >  2:479009‑M2/223‑251 (MQ=255)
                     ttatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATcc                                                                                                                                                                                                                        >  1:423355‑M2/218‑251 (MQ=255)
                      tatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATcc                                                                                                                                                                                                                        <  1:45645‑M2/34‑1 (MQ=255)
                      tatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCt                                                                                                                                                                                                                       >  1:421072‑M2/217‑251 (MQ=255)
                         ttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTgg                                                                                                                                                                                                                     >  1:129843‑M2/214‑250 (MQ=255)
                         ttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTgg                                                                                                                                                                                                                     >  1:226063‑M2/214‑250 (MQ=255)
                               ataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTg                                                                                                                                                                                                               >  2:171615‑M2/208‑250 (MQ=255)
                                 acgttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATg                                                                                                                                                                                                            >  2:624082‑M2/206‑251 (MQ=255)
                                 aagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGAt                                                                                                                                                                                                             <  1:328763‑M2/45‑1 (MQ=255)
                                               atttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGcc                                                                                                                                                                                              >  1:478826‑M2/192‑251 (MQ=255)
                                                    atattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGc                                                                                                                                                                                         >  1:380280‑M2/187‑251 (MQ=255)
                                                        tcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGc                                                                                                                                                                                     >  1:26933‑M2/183‑251 (MQ=255)
                                                          attccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCAc                                                                                                                                                                                   <  1:180645‑M2/71‑1 (MQ=255)
                                                           ttccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACg                                                                                                                                                                                  >  1:231097‑M2/180‑251 (MQ=255)
                                                            tccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACgg                                                                                                                                                                                 >  1:552161‑M2/179‑251 (MQ=255)
                                                                attatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCAt                                                                                                                                                                             >  2:429818‑M2/175‑251 (MQ=255)
                                                                     cctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGt                                                                                                                                                                         >  1:392150‑M2/170‑250 (MQ=255)
                                                                             gccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTa                                                                                                                                                                 >  1:175414‑M2/162‑250 (MQ=255)
                                                                                  cgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGtt                                                                                                                                                            <  2:527201‑M2/94‑1 (MQ=255)
                                                                                              gcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGtttt                                                                                                                                                >  1:200492‑M2/145‑250 (MQ=255)
                                                                                                gccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggcaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTAcc                                                                                                                                             >  1:485525‑M2/143‑251 (MQ=255)
                                                                                                 ccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaactgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACAccgttttccc                                                                                                                                             >  2:310250‑M2/142‑247 (MQ=255)
                                                                                                 ccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCa                                                                                                                                            <  2:66893‑M2/110‑1 (MQ=255)
                                                                                                                         gtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGttttt                                                                                                                     <  2:226063‑M2/133‑1 (MQ=255)
                                                                                                                           atactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTttgt                                                                                                                   <  1:207793‑M2/135‑1 (MQ=255)
                                                                                                                             actcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTttgttg                                                                                                                 <  1:479009‑M2/137‑1 (MQ=255)
                                                                                                                                cgatcccgtccgaaatgtttttgggtaaatctccattcattcaattaaggtaaattgtaagtaaaggaaaacatcagcgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCAGCGGTAAAGCGTAAGGTTCAACATCGTTTTACCTCTTCATGCGATTGTTGCGTTTTTGTTGCGt                                                                                                              <  1:102818‑M2/140‑1 (MQ=255)
                                                                                                                                 gatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacaccaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGCAAAGCGTAAGGTTCAACATCGTTTTACCATTCCATGCGTTTGTAgcgttttggttccgaat                                                                                                            >  2:213706‑M2/110‑245 (MQ=255)
                                                                                                                                    cccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAg                                                                                                         <  2:478826‑M2/145‑1 (MQ=255)
                                                                                                                                      cgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGAt                                                                                                       <  2:585385‑M2/147‑1 (MQ=255)
                                                                                                                                                 tttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTg                                                                                            >  1:215722‑M2/94‑251 (MQ=255)
                                                                                                                                                  ttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTg                                                                                            <  2:159454‑M2/158‑1 (MQ=255)
                                                                                                                                                              ctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTccc                                                                               >  1:306770‑M2/81‑251 (MQ=255)
                                                                                                                                                               tccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCg                                                                              >  1:471931‑M2/80‑251 (MQ=255)
                                                                                                                                                                ccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACAtctc                                                                                 <  1:268992‑M2/169‑1 (MQ=255)
                                                                                                                                                                     cattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACAGCTCCCGTAAac                                                                         <  1:63242‑M2/177‑1 (MQ=255)
                                                                                                                                                                              aagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGc                                                               >  1:329910‑M2/65‑251 (MQ=255)
                                                                                                                                                                                                  aaagacagcaacgttcgcaaaagaaaattccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCAGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCCCTTCATACGATGGTTGCTTTTTTGTTGCGTATTAGAGCACTTAATTTGCTTACCATCTCCCGTAAACACTTTTCTTCTATACCATACCTTTACGtt                                            >  2:249192‑M2/45‑250 (MQ=255)
                                                                                                                                                                                                   aaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTAt                                          <  1:341627‑M2/208‑1 (MQ=255)
                                                                                                                                                                                                        atcaacgttcgcaaaagcaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAAc                                     >  1:111334‑M2/39‑251 (MQ=255)
                                                                                                                                                                                                           aacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACgg                                   >  2:391502‑M2/36‑250 (MQ=255)
                                                                                                                                                                                                                 cgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTc                            >  2:120374‑M2/30‑251 (MQ=255)
                                                                                                                                                                                                                    aaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGc                         >  1:462114‑M2/27‑251 (MQ=255)
                                                                                                                                                                                                                       agaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTc                                                                  >  1:605928‑M2/24‑207 (MQ=255)
                                                                                                                                                                                                                       agaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTc                                                                  <  2:605928‑M2/184‑1 (MQ=255)
                                                                                                                                                                                                                        gaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGt                     >  2:569152‑M2/23‑251 (MQ=255)
                                                                                                                                                                                                                          aaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTc                    >  1:267554‑M2/21‑250 (MQ=255)
                                                                                                                                                                                                                           aatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTcac                  >  1:85137‑M2/20‑251 (MQ=255)
                                                                                                                                                                                                                            atgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTcac                  >  2:129955‑M2/19‑250 (MQ=255)
                                                                                                                                                                                                                               ccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACAccc              >  2:356136‑M2/16‑251 (MQ=255)
                                                                                                                                                                                                                                 gatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCAGGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTGCCGTAAGCATTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCcg            <  1:492987‑M2/238‑1 (MQ=255)
                                                                                                                                                                                                                                        ggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAAc     >  2:338015‑M2/7‑251 (MQ=255)
                                                                                                                                                                                                                                        ggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAAc     >  1:270900‑M2/7‑251 (MQ=255)
                                                                                                                                                                                                                                            gcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGAAGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACACTGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCa  >  2:388532‑M2/3‑250 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                       
CTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCA  >  NC_000913/4252043‑4252528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.