Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,760,384 | 0 | A | C | 31.1% | 41.2 / 13.4 | 45 | V289G (GTG→GGG) | selA | selenocysteine synthase |
Reads supporting (aligned to +/- strand): ref base A (25/6); new base C (4/10); total (29/16) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.70e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGATAATCATTCGCGT > NC_000913/3760151‑3760630 | ggATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGGT‑CATCTCTTTTTTACCCAA‑AAACATTCCTGCC‑TGCGGCCCGCCTAAAAAATTTTCGCCGGCAACACTC‑ACCCGACTGAcgcccccc > 2:315912/1‑248 (MQ=255) tGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCGCTTTTTTACCAAC‑AAAAATTCCTGCCCTG‑GGCCCCCCTCACAAATTGTCGCCGGGGAAACTC‑ACCAGACTAGCGCCCGCCCC‑aa > 1:445833/1‑250 (MQ=255) cgctgcgGGTAAGCAGGCGCAGGGTCGGTAATTTTTAACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTTATGCC‑TGCGGCCCGCCTAACAACTTTTCGACGGAGAAACTC‑CCCCCAATGACGCCCCCCCC‑AAACAACTCATGCggg > 2:354476/1‑250 (MQ=255) gctgcgGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGCGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCCGCTAACAACTTGTCGCCGGGGGAACTC‑CCCCGACCGACCCCCGCCCC‑aaacacaccctgcggc > 2:333342/1‑236 (MQ=255) ggcgggCGCAGGGTCGGTATTTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCCCGCTTCAGCGGGTGGTTTTGCAGGCGGGCGAT‑CATCTCTTTTTTCCCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACCC‑ACCAGCCTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCttt < 1:317187/247‑1 (MQ=255) aGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCCAC‑AATAATTCCTGCC‑TGCGGCCCGCCTTACAACTTGTCGCCGGCGAAACTC‑CACAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCCTTGGCTCTTTCgg > 1:19507/1‑251 (MQ=255) aGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCCAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAAATCCTGCGGCATTGGCTCTTTCgg > 1:280472/1‑251 (MQ=255) cAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTTGGCCAAc > 1:204234/1‑251 (MQ=255) cAGGGCCGGTAATTTTCCCCTAAGAGCTTCGGGGTGAAAATAAAGACGAAACGTGGCTCCCAGCGCCGCGAGGGTCTTTTTACCCGCGCGTAATGCCCGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTCCCAAC‑AATAATCCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAAc < 1:178137/251‑1 (MQ=255) gggTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCg > 1:45182/1‑251 (MQ=255) tAATTTTTCACTCAGAGCATCAGGGTGTAACTAAAGACGCAACGTGGATTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGAGGCTTTGCAGGCGGGCGGT‑CAACGCTTTTTTACCAAC‑AATAATTCCTGCC‑AGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACCCCACCACA‑TGACGCCCGCCCC‑AAACCACGCCCGCGGCATAGGATCTTTCGCCaaccccttctggc > 2:384240/1‑240 (MQ=255) aTTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAAATTGTCGCCGGAGAAAATC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCt > 1:108453/1‑250 (MQ=255) tttttCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTTGGCAAACCGTACTGGCTa > 1:9771/1‑250 (MQ=255) ttccctaagagCTTCAGGGTGAAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGGGGGTCATTTTACCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTCCCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACACCTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGa < 1:270413/243‑1 (MQ=255) ccAGAGCTTCAGGGTGAAAATAAAGACGCAACGTGGCTCCCAGCGCCGCGAGGGTCTTTTTATCCGCGCGTAATGCACGCTTCAGCGGGGGGCTTTGCGGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATCCCTGCC‑TGCGGCCCGCCTAACACCTGGTCCCCGGAGAAACTC‑CCCAGACTGACCCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGAcc < 1:434493/250‑1 (MQ=255) cAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑CCCAGACTGACGCCCCCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCTGCCAACCGTACTGGCCAAGATCGACCCGCGAGCCACTGCCCAAATCAGTCAcc > 2:127829/1‑249 (MQ=255) gTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CCTCTCCTTTTTACCAAC‑AATAATTCCTGCC‑TGGGGCCCGCCTAAAAACGTGTCGCCGGGGCAAATC‑ACCAGACTTACGCCCGCCGCCAAT‑AACTCCTGCCGCATTGGGCCTTTCGGCCAACCCTCCTGGCCACGATAGACCCGCGGGCCAcctcctcaatccaaccacacggg > 2:234518/1‑229 (MQ=255) ggCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGTT‑CATCTCTTTTTTACCAAC‑AATAATTCCTTGC‑TGCGGCCCGCCTAACAAATTTTCGCCGGAGAAAATC‑ACCAGACTGACTCCCGCCCC‑AATCCACTCCTTCGGAATTTGCCCTTTCGGCAAACCGTAACGGCTCAGAACGACCACCGACCCACCGCCtcacaccaccactcatgga > 2:405753/1‑232 (MQ=255) aGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTAACAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAAATTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATcc > 1:167592/1‑249 (MQ=255) gtctttttACCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑CCCAGACTGACGCCCGCCGC‑AATCAACTCCTGCgg < 1:357700/154‑1 (MQ=255) aTTTAATCCGCGTTTAATGCACGCTTCATGGGGTTGCTTTGCGGGCGGG‑GATTCTTCTTTTTTTCACCAAC‑AATAATTCCTGCT‑TGGGGCCCGCCTAACATCTTTCCGCCGAAGAACCTC‑ACCAGACTGCCGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCTCTACGGGAACATCCAGCTCTTTGCCGAgcg < 1:162147/250‑1 (MQ=255) tcccGCGCGTAGTGCACCTTTCGGGGGGTGTCTTTGCGGGCGGTCGAT‑CTTCTCTTTTTCACCAAC‑AATATTCCCTCCC‑TGCGCCCCCCCTAACACCTTGCCGCCGAAGAACCCC‑CCCAGACTGCCCCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGccacc < 1:85100/248‑1 (MQ=255) gaaaggcacgtctCAGGGGGTGGCTTTGCGGGCGGGCGAT‑CTTCT‑TTTTTTACCAACCAATAATTCCTCCC‑TGCGGCCCCCCTACCAACTTGTCGCCGGAGAACCCC‑CCCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCt < 1:66173/239‑1 (MQ=255) gTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CAACTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAAATC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATACAGCTCTTTGCCGAGCGCCACCAGTTCCGCt > 1:520240/1‑251 (MQ=255) aTGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAA‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGCGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCCGTTCCGCTTcc > 1:313545/1‑250 (MQ=255) aCGCTTCAGCGGGTGGCTTTGCAGGCGGGCGGT‑CATCTCTTTTTTTCCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAAAAAATTGTCGCCGGAGAAACTC‑ACCCGACTGGCGCCCGCCCC‑AATCAACTCCTGCGGGATTGGCTCTTTCGGCAAACCGTACTGGCGAAGATCGCCCAACGAACCACTGCCTAAATCAGTCACTACGGGGACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCt > 1:264590/1‑250 (MQ=255) aGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCCGACTGTCGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGGACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGGACATCCAGCTCTTTTCCGAGCGCCCCCAGTTCCGCCTCATCTATCGCttt > 2:115658/1‑251 (MQ=255) cAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGa > 1:200354/1‑250 (MQ=255) ggctggcgAT‑CATCTATTTTTTACCAAG‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGACACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGCCTCTTTCGGCACACCGTACTGGATAAGATCGCCCAACGAGCCACTGCCTAAATCAGGCACTACGGGACCAGCCAGCTCTTTGCCGGGCGCACCCCGTTCCGCTTCATCTATCGCATTGGTGAACCCCTGactt > 2:434446/5‑248 (MQ=255) gggcgCT‑CATCTTTTTTTTACCAAC‑AATAATCCCTCCC‑TGCGGCCCCCCTAACAATTTGTCGCCGGAGAAACCC‑CCCAGCCTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTg < 1:438601/251‑1 (MQ=255) gAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGt > 1:523510/1‑251 (MQ=255) atcTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTTTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACAACCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACt > 2:108047/1‑251 (MQ=255) tttttccaaac‑aaTAATCCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAACCCC‑CCCAGCCGGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTAt < 1:315912/242‑1 (MQ=255) tACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGATTGCTGTAGTTACTGGTATGTACt > 1:7584/1‑251 (MQ=255) ccaaaaaataatCCCTGCC‑TGCGCCCCGCCTAACACCTTGCCCCCGGAAAAACCC‑ACCAGACTGCCGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACtt < 1:354476/245‑1 (MQ=255) ataatTCCTGCC‑TGCGGCCCCCCTAACACCTGGCCGCCGGAGAACCTC‑CCCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATCGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCaa < 1:333342/251‑1 (MQ=255) aatTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAAc > 2:133014/1‑250 (MQ=255) ctgcc‑tgcGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCg > 1:47963/1‑251 (MQ=255) cc‑tgcGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGt > 1:396665/1‑250 (MQ=255) gcGGCCCGCCTAACACCTTGCCGCCGGAAAACCTC‑CCCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTAt < 1:78687/249‑1 (MQ=255) gCCGGAGAAACTC‑CCCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGATAAt < 1:231809/251‑1 (MQ=255) ggAGAACCTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGATAATCAt < 1:127829/251‑1 (MQ=255) gagaAACCC‑CCCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGATAATCAtt < 1:133014/251‑1 (MQ=255) aaCTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGATAATCATTcgcg > 2:97197/1‑251 (MQ=255) aCTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTAACTACGGGAACATCCAGCTATTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAAAAGTGCGGTATTTTCATTCACCGCCTGACGATAATCATTAgcgt > 1:297259/1‑251 (MQ=255) | GGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGAT‑CATCTCTTTTTTACCAAC‑AATAATTCCTGCC‑TGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTC‑ACCAGACTGACGCCCGCCGC‑AATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGATAATCATTCGCGT > NC_000913/3760151‑3760630 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |