| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,851,654 | 0 | T | G | 30.9% | 111.1 / 21.2 | 69 | G218G (GGT→GGG) | hypB | hydrogenase isoenzymes nickel incorporation protein HypB |
| Reads supporting (aligned to +/- strand): ref base T (11/36); new base G (21/0); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.87e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATTGAAGGCGACCAGCAAACCGTGAACGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTCCCGGCCAGATCCGCACCATTG > NC_000913/2851409‑2851900 | aTTGAAGGCGACCAGCAAACCGTGAACGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑g < 1:311896/250‑1 (MQ=255) aaGGCGACCAGCAAACCGTGAACGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACaa > 1:40519/1‑250 (MQ=255) gCGAACAGCAAACCGTGAACGATGCCGCACGCATTCGTGTTCCCGGCACACCAGCGATTCAGGTGAACACCGGTAAATGCTGCCATCTGGACGCACAGATGAGTGCCGACGCCGCCCCGCGTCTGCCACGGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCa < 2:485172/251‑1 (MQ=255) gACCAGCAAACCGTGAACGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTGAC‑TTCCC‑GT‑AACG‑AAGGTGAA‑GACAAACCAcc > 1:133787/1‑250 (MQ=255) cAGCAAACCGTGAACGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGaa < 2:359750/251‑1 (MQ=255) gAACGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑CCTTCCG‑AAGGGGAA‑AGCAAAACCCTGAAATATCCGCat > 1:246377/1‑250 (MQ=255) cGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTAGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑CGTACCG‑CAGGGGCA‑GACaaaaccctggaataaccgactattt > 1:374499/1‑229 (MQ=255) cgcacgcaTTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑CTTTCCC‑AAGGGGAA‑GAAAAACCACTGAAAAATCCGCataattttgttc > 1:508743/1‑242 (MQ=255) gcaTTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGTTTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTgccgccgcc < 1:201405/251‑1 (MQ=255) gcgcTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTTC‑GGTACCG‑AAGGGGAAAGA‑AAAACACTGAAAAATCCCCATATGTTTGCCGCCGCCCCGcgg > 1:500908/1‑249 (MQ=255) aCCGGCACACTAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGGCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCAGATGTTTGCCGCCGCCTCGCTG‑Atg < 1:448447/249‑1 (MQ=255) cgcgacttaggtgaaccacagTAAACGCTGCCATCTTGACGCACAATTGATTGGCCATGCCGCTCCCGGTCTTGCACTGGACGATTAATGTAATATGTTTTTTTAAAACGTTGGCAACCTCGTTTGCCCGGCCAACTTCGATCTCGGTGAAAAACACAAAGGGGCGGTT‑C‑TTTCC‑GTTTCCC‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAg < 1:200010/231‑1 (MQ=255) aGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAg < 1:329238/251‑1 (MQ=255) cGATTCAGGTGAACACCGGTAAAGGCGGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGtt < 1:286210/251‑1 (MQ=255) gTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCGCAACAAAGTT‑GACCTGtt < 1:68201/251‑1 (MQ=255) aaCACCGGTAAAGGCTGCCATCTTGACGCACAGAGGATGGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGcc < 2:154497/251‑1 (MQ=255) aGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCC‑AAGGGGAA‑GACAAACCACTGAAATATCCCCATATGTTTGCCGCCGCCTCGCTG‑ATGCCGCTCAACAAAATT‑GACCTGTTGCCGTATCTCC‑ACt > 1:212767/1‑251 (MQ=255) gCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTTC‑GTTACCG‑AAGGGGAA‑GACAAAACAAAGAAATATCCCCATATGTTTTCCGCCCCCCCGCTG‑ATGCTGCTCAAAAAAGAT‑GACCTGTTGCCGTATTTCA‑ACttttac > 1:252917/1‑248 (MQ=255) cactcagacgcgacgatgctTGCCGACGCCGCACCGGGTGTGCCACTGGTCGAGAACGGTATTCTGTTTATCGAAAGCGTTGGCACCCTCGTATGCCCGGCCAGCTTCGATCTGGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCT‑ACTTTGACG‑t < 2:83130/237‑1 (MQ=255) cTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTAACG‑AAAGTGAA‑GACAAACCACTGGGATAACCGCATATGTTTGCCGCCGCCCCGCTG‑ATGCTGCTCAACAAAGAT‑GAACAGTTGCCGCATCTCA‑AATTTTACG‑TT‑gt > 1:162954/1‑250 (MQ=255) ggACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑tt < 2:247381/246‑1 (MQ=255) cacaGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑CTTCC‑GTTTCCG‑AAGGGGAA‑GACAAACCACTGAAAAATCCGCATATTTTTGCCGCCGCCCCGCTG‑ATGCCGCTCAACAAAGTTAGAC‑TGGTGCCGTATCTCA‑CCATTGACG‑TT‑GGAAAAggc > 1:366735/1‑249 (MQ=255) gtggtattgaggtcgccgcACCGCGTCTGCCCCTAGACGAAAACGGTATTCCGATTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCACCTTCGATCGCGGGGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTGGGGCGCCGCCTCGCTG‑ATGCTGCTCAAGAAAGTT‑GACCTGTTGTCGTAACTCA‑ACGTTGACG‑GT‑G‑AAAAGTGCATc < 2:173869/238‑1 (MQ=255) gaggatggCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCg < 2:301071/244‑1 (MQ=255) ttgccgagtccccACCGCGTCTGCCACCGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGt < 2:90395/228‑1 (MQ=255) ttGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑T‑TTTCC‑GTTTCCG‑CAGGGGAA‑AACAAACCACTGGAAAATCCGCATATGTTTGCCGCCGCCCCGCTG‑ATGCTTGTCAACAAAGTT‑GACCTGTTGCCGTATCTTA‑AATTTGTCG‑TT‑T‑AAAAgcagattgggca > 1:90395/1‑239 (MQ=255) cgcACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GGTACCC‑CAGGGGAA‑GAAAAAACACTGAAATAACCGCCTAAGTTTTGCGGCGCCTCGCTG‑ATGCTTCTCAACAAAATT‑GACCTGTTTCCGTCTCTCC‑ACTTTTAAG‑TT‑G‑GAAAGAGCactgcctccccccgcca > 2:52511/1‑233 (MQ=255) cccGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCa < 1:104929/250‑1 (MQ=255) ccttcgcgtcTGGCCGATAACGGGATTCTAGTTAGCGAAAACGTCGGCAACCGCGTGTGCCGGGCCAGATTCGATCTCTGTAAAAAACACAAAGTGGCGGCG‑C‑TTTCC‑GGTACCG‑AAGGTGAA‑TACAAACCTCTGAAATATCCGCATACTTTTGCCGCTGCCTCGCTG‑TTTCTGCTGAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAATTGCACCGCCTGCGCCCGCGATGTCTATcc < 2:520203/242‑1 (MQ=255) gCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTTCCG‑AAGGGGAA‑GACAAAACACCGAAATAACCGCATATGTTTGCCGCCGCCTCGCTG‑GTGGTGCTCAACCAAGAT‑GACCTGTTGACGGATTTCA‑ACTTTTACGGTT‑A‑AAAAG‑GCATCGCCTGCGCCCGCCGAGTCAAACCAGaa > 1:107553/1‑250 (MQ=255) gCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTATCG‑AAGGGGGA‑GACAAACAACAGAAAAATCCGCCTATGTTTGCCGCCCCCTCCCGG‑AAGCCGCCCAACAAAATT‑TACCCTTTTCCGTATCTCA‑CCTTTGTCT‑TT‑T‑AAAAAAGCATCGCCCGCGCCCGCGAAGGCAAACCaaaa > 2:217347/1‑247 (MQ=255) aCGATAACGGTATTCTGTTTATCGAAAACGTTGGCAGCCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAatc < 1:238326/251‑1 (MQ=255) tAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAg < 1:186594/236‑1 (MQ=255) tCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGAG‑C‑TTTCC‑GTTACAG‑AAGGGGCA‑GACAAACCACTGTAATATTCCCATATTTTTGCCGCCCCCTCGCTG‑ATGCTGCTCAAAAAAATT‑TGCCTGTTTGCGTATCTCA‑ACTTTGTCG‑TT‑T‑AAAAATGCATCGCCCGCCCCCCCGAAGTCAATCCCGAGATT‑TAAAACA‑TCCTTTTTTccc > 1:107882/1‑250 (MQ=255) tGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTTC‑GTTACCG‑GAGGGGAA‑GAAAAAACACTGGAATATCCGCATATGTTTGGCGCCGCCTCGCTG‑ATGCTGCTCCACCAAGTT‑GTCCTGTTGCCGTATCTCC‑ACTTTTACG‑TT‑T‑AAAAGAGGATCGCCCTCGCCCCCGAAGTCAATACAGAAAAT‑TAAATCA‑TCCTTATTTCCGcc > 1:220975/1‑251 (MQ=255) gTTTATCGAAAACTTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGcc < 2:246377/250‑1 (MQ=255) gTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGCG‑C‑CTTTC‑GTTTCCG‑AAGGGGAA‑AAAAAACCAACGAAATATTCCCATATGTTTGTCGCCCCCCCGCTGGAT‑CTGCTCCACAAAGTT‑GACCTTTTGCCGCATCTCA‑ACCTTGACG‑TTTG‑AAAA‑TGCATCGCCCGCCCCCCCGAAGACAAACCACAAATTTGAAatatcacttttttccccc > 2:207056/1‑235 (MQ=255) cGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAACCACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAgcg < 2:459857/251‑1 (MQ=255) gAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTTC‑GTTTCCG‑CAGGGGAA‑AAAAAACCACCGAAAAATCCGCCTATTTTTTCCCCCCCCCCCCTG‑GTGCTTCTCAACAAAGTT‑GAACTGTTTCCGGATCTCC‑ACTTTGTCG‑TT‑G‑AAAAGTGCCTCGCCCGGCCCCCCGGAGTCAAACCCGAAATT‑TAAATCA‑TCCTTTTTTCCGCCCCCAccgg > 2:136554/1‑251 (MQ=255) tGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGCG‑CCTTTCC‑TTTAAGC‑AAGG‑GAA‑AACCAAACACCTAGATATCCGCATATGTTTGCCGCCGCCCCGCTGGATGTTG‑TCAACAAAAGT‑GACCTGTTGCCGGATCTCCCACTTT‑ACG‑TT‑G‑AAAAGTGCATCGCCCGTCCCCGCGACGTCAACCCCCAAAAT‑GAAAACA‑TCCTTATTTACGccccccgccacacaaggg > 2:123050/1‑235 (MQ=255) aCCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGAGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAAGCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGAc < 2:357579/251‑1 (MQ=255) cGTATGCCCGGCCAGCTTCGATCTCGGTCAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑AT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATG‑GAAATCA‑CCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGAACCAGt < 2:108434/251‑1 (MQ=255) gTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCCCGTT‑CCC‑AAGGGGAA‑GACAAACCCCTGAAAAATCCGCATATGTTTTCCGCCCCCCCGCTG‑GAGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATTTCA‑ACATTGACG‑TT‑G‑AAAAATGCATCGCCTGCGCCCCCCAAGTCAATCCAGAAATT‑TAAATAC‑TCCTTTTTTCCCCCCCCCGCGGCG‑AAGGGATgggacagtg > 2:305093/1‑244 (MQ=255) gCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCt < 1:450432/250‑1 (MQ=255) gCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTGCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGcg < 2:52168/250‑2 (MQ=255) cGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑CAGGGGAA‑GAAAAACCAATTAAATATTCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAATT‑GACCTGTTGCCGGATCTCA‑ACCTTGACG‑GT‑G‑TAAAGAGCCTCGCCCGCGCCCGCGGCGTCCAACCAGAAATT‑GAAAATA‑TCCTTATTTTCCCCCCCAGCGGCG‑AAGGGGTGGGCCCATGGCTGaa > 2:383685/1‑250 (MQ=255) gCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑GCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAActg < 2:302019/251‑1 (MQ=255) ccAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTC‑C‑TTTCC‑GTTTCCG‑CAGGGGAA‑AACAAACCACTGAAAAATAAGCATATGTTTTCCGCCGCCTCGCTG‑AAGCTTCACAAAAAAAGT‑GACCTGTTTCCCTATTCCA‑ACATTGTCG‑TT‑G‑TAAAGAGCATCGCCCGCGCCCCCGCAGACAATACCGAAAAT‑GAAATCACTCCT‑ATTTCCCCCCCCAGCGGCGCAAGGG‑TGGAcccgaggcgtgactgg > 2:384946/1‑237 (MQ=255) tCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GGTACCG‑AAGAGGGA‑GACAAAACACCTAAATTTTCGGATATGATTGCCGCCGCCTCGCTG‑ATTCCGCTCCAAAAAGAT‑GACCCGTTTCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGGGCATCGCCTGCGCCCCCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGGCAACCGCGGGG‑GAGGGAAGGGCAAGTGGCTGGActggccgggg > 1:181135/1‑246 (MQ=255) gATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GCTAACGCAAGGT‑AA‑GACAAACAACTGAAAAAACCGCCTATGTTTGACGCCGCCCCGCTGGAT‑CTGCTCAAAAAAATT‑TACCTGTTGCCGTATCTCA‑ACTTTTAAG‑TT‑G‑AAAAGAGGAACGCCCGCGCCCGCGGAGGCAATCCAAAAATT‑TAAAATA‑ACCTTATTTCCCCCACCCACGGCG‑AAGGGATGGGCCAGTGGCCGGACTTGCTGGGGac > 2:389916/1‑251 (MQ=255) cGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGac < 1:478550/246‑1 (MQ=255) cGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGAcaca < 1:341527/249‑1 (MQ=255) cGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGGGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTTCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGc > 1:23340/1‑251 (MQ=255) aaaCACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGGGAA‑GACAAACCACTGAAAAATCCCCCTATGTTTTCCGCCCCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGCATCTCA‑ACTTTTACG‑TT‑G‑AAAAATGCATCGCCCCCGCCCCCGCAGACAATCCCGAAATT‑GTAAACC‑TCCCTTTTTCCGCCCCCAGCGGCG‑AAGGGGAGGGCCAGTGGCTGAACTGGGTGGGGACACACCGAGGTGc > 2:380519/1‑251 (MQ=255) acaAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAAGCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAg < 2:350617/251‑1 (MQ=255) gTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGtt < 2:252917/251‑1 (MQ=255) gggCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAAGATCCGCATATGTGTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTc < 2:415693/250‑1 (MQ=255) ggCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTcc > 1:324055/1‑251 (MQ=255) ggCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTc < 1:122862/250‑1 (MQ=255) gCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAActg < 1:53777/218‑1 (MQ=255) ggTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTCCCgg > 1:71366/1‑251 (MQ=255) gTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGCCG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTCCCGGc > 2:418615/1‑251 (MQ=255) tG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCTGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTCCCGGcc > 1:77331/1‑251 (MQ=255) c‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCt < 2:521055/201‑1 (MQ=255) c‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCt > 1:521055/1‑201 (MQ=255) ccG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTCCCGGCCAGATCCGccccc > 2:142436/1‑247 (MQ=255) g‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTCCCGGCCAGATCCGCACCAtt < 1:508322/251‑1 (MQ=255) aaGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTCCCGGCCAGATCCGCACCATTg > 1:125040/1‑251 (MQ=255) aaGGTGAA‑GACAAACCACTGAAAAATCCGCTTATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTCCCGGCCAGATCCGCACCATTg < 2:366735/251‑1 (MQ=255) | ATTGAAGGCGACCAGCAAACCGTGAACGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTG‑C‑TTTCC‑GTTACCG‑AAGGTGAA‑GACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG‑ATGCTGCTCAACAAAGTT‑GACCTGTTGCCGTATCTCA‑ACTTTGACG‑TT‑G‑AAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATT‑GAAATCA‑TCCTTATTTCCGCCACCAGCGGCG‑AAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAGGCGTTCCCGGCCAGATCCGCACCATTG > NC_000913/2851409‑2851900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |