| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,361,226 | Δ9,811 bp | [gltF]–[nanE] | [gltF], yhcA, yhcD, yhcE, insH10, yhcE, yhcF, yhcG, nanQ, nanK, [nanE] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3361226 | 3371036 | 9811 | 33 [0] | [0] 33 | [gltF]–[nanE] | [gltF],yhcA,yhcD,yhcE,insH10,yhcE,yhcF,yhcG,nanQ,nanK,[nanE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3361225 | 0 (0.000) | 33 (0.550) | 30/494 | 0.8 | 100% | coding (50/765 nt) | gltF | periplasmic protein GltF |
| ? | NC_000913 | 3371037 = | 0 (0.000) | intergenic (‑1/+47) | nanE/nanT | putative N‑acetylmannosamine‑6‑phosphate 2‑epimerase/N‑acetylneuraminate:H(+) symporter | |||||
ACCGGAGAATCCTCCAGATCGCGTTTCACAATTCCAATAATCGGCACGCTCACCACCGCACGCGTGGCTTGCAGATTTGCCACACCTTCAATGCGAATGGCAACCGCGCCCGCCTGTTCTGCCGCTAATGCCATGGCGGCGACGATTTCGGGTTTATCGAGCGGGCTGTCCGGAACCGGCTGGCAGGAGACAATCAGGCCACCGTTAGCAGCGATTTTTTGATCCAGTTGTGCAAGTAACGACATACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGAGAAGGCATATCCAGCCCAATCAGCAGGATCACCACGAACGTCAGACTGAACGAGAGCGATGCCAGCGCAGTACCC > NC_000913/3370792‑3371282 | aataattatcaccacaaaccacctcaccagcaccttattattcacatgatcgtaactataaaattcattaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCt > 1:113692‑M2/246‑251 (MQ=255) ataattatcaccacaaaccacctcaccagcaccttattattcacatgatcgtaactataaaattcattaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCtt < 1:360870‑M2/7‑1 (MQ=255) tatcaaaaaaacacacttcaccagcaccctattattcacatgatcgtaactataaacttcattaaataaatacatcccagcaagttggctatttctgaacgagatatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaacataaatttgttattaagtatatgttcatatgtttttcaaaaagaacctcacaacagctactatttgtgcagcactttcACATCTTCCCtt > 2:198300‑M2/240‑251 (MQ=255) caccagcaccttattattcacatgatcgtaactataaaattcattaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTGCCCTTAGCGAAAGGCCCGGTAc < 2:103761‑M2/29‑1 (MQ=255) gcaccttattattcacatgatcgtaactataaaattcattaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGAc < 1:318942‑M2/35‑1 (MQ=255) ccttattagtcacatgatcgtaactataaaattcattaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagcgttttattttaaaaaataaatgtgttcttaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcacgttcACATCTTCCCTTAGCGAAAGAACCAGTACATAGACCgg < 2:447631‑M2/38‑1 (MQ=255) tattattcacatgatcgtaactataaaattcattaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACAGGGc > 2:488993‑M2/211‑250 (MQ=255) tcgtaactataaaattcattaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACttt > 1:32259‑M2/197‑251 (MQ=255) gtaactataaaattcattaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatagatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcacgttcACATCTTCCCGTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTg < 2:138825‑M2/57‑1 (MQ=255) attcattaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTa > 2:246693‑M2/184‑250 (MQ=255) attaaataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaagttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCg < 1:298071‑M2/72‑1 (MQ=255) aataaatacatcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGtttt > 2:156217‑M2/176‑251 (MQ=255) catcccagcaagttggctatttctgaacgagttatttatttacattcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgatatttgtgcagcacttgcACATCTTCCCGTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACGTTTGGTTTTGACTAAATCGTTTTTGGCGCTg < 2:178262‑M2/84‑1 (MQ=255) tcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTc > 1:278271‑M2/123‑250 (MQ=255) tcacaaacagatatatatactgcttcagctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTc > 1:225156‑M2/123‑250 (MQ=255) actgcttcatctttttattttaaaaaataaatttgttattaaggatatgttcatatttttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACTGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTcc < 2:7136‑M2/147‑1 (MQ=255) agctttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGca > 1:68616‑M2/97‑250 (MQ=255) ttttattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCATCGCTTCCGGGCGcaacca > 2:232225‑M2/93‑250 (MQ=255) tattttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGc > 2:347842‑M2/90‑251 (MQ=255) ttaaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGa < 2:13300‑M2/165‑1 (MQ=255) aaaaaataaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAAcg < 2:113692‑M2/168‑1 (MQ=255) aaatttgttattaaggatatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCgaga > 1:393048‑M2/77‑249 (MQ=255) atatgttcatatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGAGAAGGCATATCCAGCCCAAt > 1:279910‑M2/61‑251 (MQ=255) catatgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGAGAAGGCATATCCAGCCCAATCAGCAgg > 1:188821‑M2/54‑251 (MQ=255) atgtttttcaaaaagaacctctcaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGTGAAGGCATATCCAGCCCAATCAGCAGGATc < 2:399942‑M2/201‑1 (MQ=255) tgtttttcaaaaagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGAGCAACCAACGCTGAACGCGAGAAGGCATATCCAGCCCAATCAGCAGTATc > 1:296080‑M2/50‑250 (MQ=255) aaatagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGCAAGGCCCGGTACATAGACCGGGCAACAGGCTTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGAGAAGGCATATCCAGCCCAATCAGCAGGATCACCACGAAc > 2:433848‑M2/42‑251 (MQ=255) aaaaagaacctcacaacagctgctatttgtgcagcactttcAAATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCACACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCCGAACGCGAGAAGGCATACCAAGCCCAATCAGAAGCATCACCACGAAc > 2:340749‑M2/42‑251 (MQ=255) aagaacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGTATTAACTTTTGGTTTTGACAAAATCGTTTTTGGCGATGCAAAACGGCAAGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGAGAAGGCATATCCAGCCCAATCAGCAGGATCACCACGACCGTc > 1:82466‑M2/39‑251 (MQ=255) aacctcacaacagctgctatttgtgcagcactttcACATCTTCCCTTAACGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGAACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGCGAAGGCATATCCAGCCCAATCaacaggatccccaacaccgtc > 2:22139‑M2/36‑240 (MQ=255) acaacagctgctatttgtgcagcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGACAAACGGCACGGCACCGCTGAATGGTTTACCGCCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACCCTGAACGCGAGAAGGCATATCCAGCCCAATCAGCAGGATCACCACGAACGTCAGACTGAAc > 1:516088‑M2/30‑251 (MQ=255) agcactttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGAGAAGGCATATCCAGCCCAAGCATCAGTATCACCACGAACGTCAGACTGAACGAGAGCGATGCCAGCGCAGt < 1:198300‑M2/242‑1 (MQ=255) tttcACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGAGAAGGCATATCCAGCCCAATCAGCAGGATCACCACGAACGTCAGACTGAACGAGAGCGATGCCAGCGCAGTAccc > 2:59710‑M2/5‑250 (MQ=255) | ACCGGAGAATCCTCCAGATCGCGTTTCACAATTCCAATAATCGGCACGCTCACCACCGCACGCGTGGCTTGCAGATTTGCCACACCTTCAATGCGAATGGCAACCGCGCCCGCCTGTTCTGCCGCTAATGCCATGGCGGCGACGATTTCGGGTTTATCGAGCGGGCTGTCCGGAACCGGCTGGCAGGAGACAATCAGGCCACCGTTAGCAGCGATTTTTTGATCCAGTTGTGCAAGTAACGACATACATCTTCCCTTAGCGAAAGGCCCGGTACATAGACCGGGCAACAGGATTAACTTTTGGTTTTGACTAAATCGTTTTTGGCGCTGCCAAACGGCACGGCACCGCTGAATGGTTTACCGTCGATAGCGTCATGAGTACGCAACGCTTCCGGGCGCAACCAACGCTGAACGCGAGAAGGCATATCCAGCCCAATCAGCAGGATCACCACGAACGTCAGACTGAACGAGAGCGATGCCAGCGCAGTACCC > NC_000913/3370792‑3371282 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |