Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 161,653 | 0 | T | G | 26.3% | 159.2 / 11.0 | 76 | T127P (ACC→CCC) | thpR | RNA 2',3'‑cyclic phosphodiesterase |
Reads supporting (aligned to +/- strand): ref base T (20/36); new base G (20/0); total (40/36) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.33e-07 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTCGCCTAAAAATGCCAGAG > NC_000913/161405‑161898 | cATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGGGGCGTAAAGGGGGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑GATGTCACCGCCTCGCCGGCGTCGCGCCATAAGGTa > 1:261852/1‑250 (MQ=255) gATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCCATAAGGGAATAtgggggtg > 1:151312/1‑245 (MQ=255) gATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGAt < 1:204966/250‑1 (MQ=255) acaTCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCCAACGAGGAGGCGGAAAGGGGGAACTCCGTCACCGCATAC‑GAAC‑AGTTAAAAACTGGCGGCGGG‑GTTGTCCCCCCCCCCCTTGCCTCCCGCAAAAAGGGAATTTGTGGGTGaaa > 2:215027/1‑250 (MQ=255) caTCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑GATGTCACCGCCTCGCTGGCGTCGCGCCATAAGGGTATATGTGGATGAAACg > 1:382452/1‑251 (MQ=255) caTCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGGGTGCGTCCACGGGCAAACGGGGAGGCGTAAAAGGTGAACTCCCTCACCGCATAC‑GACC‑AGTTAAAACCTTGCGGCGGG‑ATTTTCACCCCCTCCCTTGCGTCGCGCCATAAAGGAATATGTGGATGAAACg > 1:100944/1‑251 (MQ=255) aTCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑GTTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGGAATATGTGGGTGaaaagg > 1:370399/1‑248 (MQ=255) aaaaaCGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGCGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑GTTGTCACCGCCTCGCTGGCGTCGCGCACTAAAGTAATATGTGGGTGAAACGGACGCTTGc > 1:177085/1‑251 (MQ=255) gTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCCATAAGGGAATATGTGGATGAAACGGACGATTGCTTTTAAaac > 1:468060/1‑250 (MQ=255) ccGCTGAATTAGCGTCGCGCTGTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTTGCGGCGTGT‑GGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCGCCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAAcc < 2:528098/250‑1 (MQ=255) gCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCCCGGGCAAAAGAGGAGGCGTCAAGGGGGAACTCCGTCACCCCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑GTTGTCCCCGCCCCGCTGGCGCCGCGCCAAAAGGGAACATGTGGCTGGAACCGACGctttctttttaaactaacgc > 2:273188/1‑239 (MQ=255) gCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGGCCACGGGCAAACGAGGAGGCGTAAAGGGGGAACTCCGTCACCGCATAC‑GACCCGGTTAAAAC‑TGGCGGCGGG‑ATTGTTACCGCCTCGCTGGCGTCGCGCAATCAGGGAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGc > 1:341199/1‑251 (MQ=255) tGAATTAGCGCCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGGGTGCGTCCACGGGCAAACGAGGAGGCGGAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑CGTTAAAACCTGGCGGCGGG‑GTTGTCACCGCCTCGCTGGCGGCGCGCAATAAGGGAATATGGGGGTGAAACCGACGGTTGCTTTGTAAACAACCGCTg > 1:353307/1‑251 (MQ=255) gAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATGGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATCC‑GTCC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCt < 1:7695/249‑1 (MQ=255) tAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGGGTGCGTCCACGGGCAAACGAGGAGGCGGAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTGATATGTGGATGAAACGGACGAATTCTTTTTAAAAAACCGCTGCgggg > 2:267654/1‑250 (MQ=255) aGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑GTTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGGTTGCTTTTAAAAAAACCGCTGCGGGcc > 1:261737/1‑250 (MQ=255) gcgcgcTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCtgt < 1:387620/251‑1 (MQ=255) gcTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGG‑AGCGTGTGCGTCCTCGGGAAAAAGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTTTCCACGCCTCGCTGGGGTCGCGCCATAAGGGAATATGTGGGTGAAACGGACGATTTCTTTGTAAAAAACCGCTGCGGGCAGCCcgtgcac > 2:227608/1‑248 (MQ=255) agagGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCGGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAg < 1:95239/250‑1 (MQ=255) agGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTCGCGGCGTAT‑AGACTGTGAGACCACGGGGAAAAGAGGAGGTGTAAAGGGTGAAATCCGTCACCGCATAC‑CACC‑CGTTAAAACCTGGCGGCGGG‑GTTGTCACCGCCTCGCCGGCGTCGCGCGATAAGGGAATATGTGGATGAAAAGGACCCTTGCTTTTAAAACAACAGCTGCGGGCAGCCTGTGCACAGAGCat > 1:449306/1‑251 (MQ=255) ggAGAAAATTCCATTGCGACAATCCTTGTTATTGCTTTAGCGCACAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTc < 2:516228/251‑1 (MQ=255) ggAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCCCGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGGTTAAACCCGGCGGGGGG‑ATTTTCACCGGCTTGCTGGCCTGCCGCAATAAGGGAATAATCGGGTGAAAAGGACGATTGCTTTGTAAACAACCGCAGCAGGCAGCCCGTGAAAGGAGCacactt > 2:96303/1‑246 (MQ=255) aaaTTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGGGGCGTAAAGGGGGGACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑GTTGTCAACCCCTCGCTGGCGGCGCGCAATAAGGGAATATGTGGGAGAAAAGGGCGGATGCTTTGAAAACAACCCCTGCGGGCGACCTGTTAACggggccaatttcgca > 2:305771/1‑237 (MQ=255) aTTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTCCCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAAAGAGGAGGCGTCAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGATAAAACCTGGCGGCGGGGATT‑TCCCCGCCCCGCTGGCGTCCCGCCATAAGGTAATATGTGGATGAAACGGGCAGTTGCTTTGAAAAAAACCGCCGCGGGGAGCCCGTGAACGGAGCATATTCGcc > 1:153817/1‑247 (MQ=255) tCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAA‑GACC‑CATTAAAACCTGGCGGCGGG‑AGTGTCCCCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAAACGCCGCGGGCCGCCTGTGCACGGAGCATATTAGCCAGCTgg > 1:228259/1‑251 (MQ=255) cGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGc < 1:267654/251‑1 (MQ=255) gACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAAAGAGGAGGCGTAAAGGGTGGACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTAACCGCCCCGCCGGCGTCGGGCAATAAGGGAATATGGGGGTGAAACGGACGATTGATTTTAAAAAAACCGCTGCGGGCCGCCTGTGAACGGGGCATATTCGCCAGATGGATTAAGcc > 1:543734/1‑251 (MQ=255) cAATCCTTGGTTTTTCGGTAGCCCCCCGCGTTTTAGCGGCG‑GTGAGCGTGTGCGTCCACGGGCAAACGGGGAGGCGTAAAGGGGGAACCCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCcgc < 2:150951/251‑1 (MQ=255) aaTCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAAGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCCGGCGTCGCGCAATAAGGGAATATGTGGATGAAACGGACGGTTGCTTTGAAAACAACCCCTGCGGGCAGCCTGTGGACGGAGGATAATCGCCAGCTGGATTAAGCcgcg > 1:540199/1‑251 (MQ=255) aTCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCCCGGGCCAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑GTTGTCACCCCCCCGCCGGCGCCGCGCACTAAGGGAATATGTGGGTGAAAAGGACGATTGCTTTGAAAACAAACGCCGCGGGCAGCCCGTGAACGGAGCATATTTCCCCGCTGGATTaaaccccgg > 2:496560/1‑244 (MQ=255) gTTATTGCGTTAGCTCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTAAACTCCTTCACCGCATAC‑GACC‑AGTTAAACCCTGGAGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCTCGTggcgg < 2:310466/250‑1 (MQ=255) gCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACg < 1:481155/250‑1 (MQ=255) aGCGCCCGGGGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACGCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATccc < 2:198346/251‑1 (MQ=255) ccAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAacc < 1:338102/251‑1 (MQ=255) cAGCGTTTTAGCGGCGTGT‑AGAGAGTGCGTCCACGGGCAAACGAGGAGGCGGAAAAGGTGGACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑AATGTTACCGCCTCGCTGGCGTCGGGCAATAAGGGAATATGGGGCGGAAACGGAAGATTGCTTTGGAAACAACCCCCGCGGGGAGCCTGGGAACGGGGCATATTCGCCCGCTGGATTAAGCCGCGGggcggggcacgcctcccccaccc > 2:518459/1‑233 (MQ=255) aGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGGAATATGTGGGTGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGGGGCGGCTGACGCATCCCTAaccac > 1:570632/1‑251 (MQ=255) tttaggggcggctagcttctgCGTCCCCGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCCCCTCATAC‑GACC‑AGTTAAAACCTGGGGGGGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGTTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAaccacacca < 2:324604/231‑1 (MQ=255) cggcgTGT‑AGCGGGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGGGAACTCCGTCAACGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGACTCGCTGGCGGCGCGCAATAAGGTAATATGTGGGTGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGAATATTCGCCAGCTGGATTAAGCCGCGTGGCCGCGTACGCATCCCTAAACACCCCACAcgcg > 2:568963/1‑251 (MQ=255) gtgt‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGGGGCGGCTGACGCATCCCTAACCACACCACACGCGAACg > 1:548877/1‑251 (MQ=255) gaGCGTGGGCGGCCACGGGCAAACGTGGAGGCGTAAAGGGTGAACCCCGTCCCCGCATAC‑GCCC‑AGTTAAACCCTGGCGGGGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCTCACTCGAACGCAg < 2:443554/250‑1 (MQ=255) gtgtGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACCCAGCCAt > 2:421521/1‑251 (MQ=255) gggggtcgactggcaatagaggagGCGTAACGGGTGAGCCCCGCCACCGCATAA‑GCCC‑GGTTAAAGCCTGGCGGGGGG‑TTTCACACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCCTATTCGCCAGCTGGATTAAGCCGCGTGGCGGATGACGCATCCCTAACCACACCACACGCGAACGCAGCTAtt < 2:261659/232‑1 (MQ=255) gCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGt < 1:10921/250‑1 (MQ=255) gTCCCCGGTCAAACGAGGAGGCGTAAAGGTTTACCGCCGTCACCGCATAC‑GACC‑AGTTAAAACCAGGCGGCGGG‑ATGTTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGATCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACTCCACACGCGAACGCAGCCATTGTCCg < 1:453645/251‑1 (MQ=255) ccACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGc < 1:275360/251‑1 (MQ=255) aCGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGc > 1:457803/1‑251 (MQ=255) ggTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCGGGCGGGGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAg < 1:20400/251‑1 (MQ=255) gTGAACTCCGGCACCGCATAC‑GACC‑AGTTAAATCCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAgg < 1:184739/251‑1 (MQ=255) ccccGTCACCGAATACCGAC‑‑AGTTAAAACCTGGCGGAGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGAc < 1:34083/249‑1 (MQ=255) gTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAAt > 1:565225/1‑251 (MQ=255) aC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCt < 1:237648/251‑1 (MQ=255) c‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTa < 2:261737/251‑1 (MQ=255) cc‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTaaaa < 1:68860/251‑1 (MQ=255) gTTAAACCCTGGGGGGGGG‑ATTGTCACCGCCTAGCTGGCGTCGAGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAagag < 2:100944/251‑1 (MQ=255) aaaaCCGGGCGGGGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGaaa < 2:13283/251‑1 (MQ=255) cgggcgggGGG‑TTTGTCGCCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGcc < 2:526828/249‑1 (MQ=255) ggcggG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGGAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTtctc > 1:445761/1‑251 (MQ=255) gatgg‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATAGGTGGATGAAACGGACTATTTCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGAGTAAGCCGCGTTGCGGCTGCCGCATCCCTAACCACACCACGCGCGAACGCAGCCTTTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTctct < 2:432577/248‑1 (MQ=255) ggg‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCttt > 1:318275/1‑251 (MQ=255) ggg‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCttt < 1:363689/251‑1 (MQ=255) aTTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTtctc > 1:269868/1‑251 (MQ=255) ccACCGCCGCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGgcg < 2:445761/250‑1 (MQ=255) gCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCAc < 2:468060/251‑1 (MQ=255) cTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCATTCTCTTTCTCGGCGCTCACtt > 2:150550/1‑251 (MQ=255) cGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTc < 1:421521/250‑1 (MQ=255) cGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTc < 1:46539/250‑1 (MQ=255) gCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACCCGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGGGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAA‑GCGCCTTCTCTTTCTCGGCGCTCACTTCGcc < 1:96303/251‑1 (MQ=255) gCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTCGc > 2:460598/1‑251 (MQ=255) cTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTCGcc > 2:539339/1‑251 (MQ=255) cgcgCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCTGCGCTCACTTCGCCTaaaaa > 2:187364/1‑250 (MQ=255) cgcgCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTCGCCTaaaaa < 1:346448/250‑1 (MQ=255) cgcgCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTCGCCTAAAAAt > 2:428400/1‑251 (MQ=255) gcAATAAGGGAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGAGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGCTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTCGCCTAAAAATGcc > 1:534635/1‑251 (MQ=255) aaTAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTCGCCTAAAAATGcc > 1:482426/1‑249 (MQ=255) aTAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTCGCCTAAAAATGcc > 1:107011/1‑248 (MQ=255) aaGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGACCGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCTCTTCGCCTAAAAATGCCagag < 2:353307/250‑1 (MQ=255) | CATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGT‑AGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAC‑GACC‑AGTTAAAACCTGGCGGCGGG‑ATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAGCGTGAGTGTGAAACCAGGTTGACGAATCCGTCCGGCTAAAAGAGAAAGCGCCTTCTCTTTCTCGGCGCTCACTTCGCCTAAAAATGCCAGAG > NC_000913/161405‑161898 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |