Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,256,061 | 0 | C | T | 29.1% | 75.7 / 16.5 | 55 | E136K (GAA→AAA) | plsB | glycerol‑3‑phosphate 1‑O‑acyltransferase |
Reads supporting (aligned to +/- strand): ref base C (6/33); new base T (16/0); total (22/33) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.51e-09 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
ATTAAACAGATCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAAT‑AGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAA > NC_000913/4255813‑4256301 | attaAACAGCTCCTGACGCGCAGGAAAACGTGGGCATAGGGCAGCCAGCCGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGGTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑Ac < 2:35030/251‑1 (MQ=255) attaAACAGATCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑Ac < 1:410790/251‑1 (MQ=255) aGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCaa < 1:332056/251‑1 (MQ=255) aaCGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCCCCCTTTTTT‑A‑GCCCC‑CG‑CGCGCGACCAAAA‑ATC‑Acc > 1:337453/1‑251 (MQ=255) gggggcatggggCAGCCAGCCGTGGACGGGCAAGGTGCATCCGGGCCCCGCGCGCGAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGGGTTCACCCGCCATACGGCGCAGCGAAACGGACGGCGAGAAACGCACAAAACTGGCGCGACCGAGCCACAGTACAGCGAAAAATTGCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGac < 2:508827/241‑1 (MQ=255) ggCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCCATTCGCC‑TTTTTT‑AACCCCC‑GC‑CCCGCGACCCAAC‑ATC‑ACCgcaccc > 2:237487/1‑246 (MQ=255) gacgtcgtcgtaccGTTGAGGGGCAAAGTGCATCCGCGCCACGCGGGCCAGTTGCTGAG‑GATGATTTTTTTCCGTGCCATGTTCATCCGCCATACGGCGCATCGAAACCGACGGCGAGAAACGCACAAATCTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGc < 2:327939/237‑1 (MQ=255) cAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATc < 1:337696/251‑1 (MQ=255) gCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTg < 1:97427/251‑1 (MQ=255) gggcggtaaaagtgctaccgcgCCCCGCGCGCCATTTTCTGCGCGAT‑GGTTTTCTCCGTGCCGGTTTCACCCGCCAGCCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGCCCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAg < 2:367543/233‑1 (MQ=255) gggCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGGTAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAACCTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGAttt < 1:581128/251‑1 (MQ=255) gCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCCCCTTTCC‑TTTTTT‑TCCCCCC‑GG‑CGCGCGCCCACAA‑ATC‑ACCCACA‑CCTGCCCCCCCTGCACATCCaacttttg > 1:557038/1‑244 (MQ=255) cAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCCCCTCGCC‑CTTTTT‑ACCCCCC‑CG‑CCGGCCGCCAAAC‑CTC‑ACCCACA‑CTCGCAccctcctgacccacagaatttgg > 2:197515/1‑230 (MQ=255) aaaGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGt < 1:200885/251‑1 (MQ=255) aattGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑ATTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGtt < 1:392949/248‑1 (MQ=255) aaGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTTAATTCGCC‑TTTTTT‑ATGCCCC‑CG‑CGCGCGACCAAAC‑ATT‑AAACACAACGGGCAC‑ACCTGCACAGCCAGATTT‑GGGtt > 1:137548/1‑251 (MQ=255) gCATCCGCGCCTCGCGCGCCAGTTTCTGAGCGAT‑AGTTTTACCCGGGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTa < 1:45155/251‑1 (MQ=255) cacgctggcCAGTTTCTGAGCGAA‑ATTTTGACCCGTGCCGTGTCCAGCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTTTCGCGGCCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAAt < 1:154166/244‑1 (MQ=255) cgcgcCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACCTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCCAAA‑ATC‑ACCGACA‑CTGGCCCCCTCTGCACATCCAGATTT‑GGGTTG‑CTACGGGGCAAATCg > 1:376045/1‑249 (MQ=255) ccAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAg < 1:367684/251‑1 (MQ=255) gTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTTACTTCGCC‑CTTTTC‑ACGCCCC‑CG‑CGCGCGACCAAAC‑ATC‑ACCGCCA‑CTCGCACCACCTGCACATCCCGATTT‑GGGTTG‑CTTCGGTGCAAATCGAGATAGTCg > 1:406523/1‑251 (MQ=255) cTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCTCC‑TTTTTT‑ACGCCCC‑CG‑CGCGCGACCAAAC‑ATC‑CCCCACA‑CTGGGCCCATCTGCCCATCCAGAATT‑GGGGTG‑CTACGGGGCAAATCGGGATAGTCG‑Tggg > 1:189008/1‑250 (MQ=255) gtcGAT‑AGTGTAATCCGGGCCGTGTTCAGCGGCCATCCGGCGCAGCGAAACTGACGGCGAGAAAGGCACAAAGCGGGGGCGACGGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCAGACGCAGCGGCGGGTGAAATTCGGC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCAGCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACa < 1:246088/249‑1 (MQ=255) gTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAAt < 1:215047/251‑1 (MQ=255) ttacccggtcctgtttgaacccGCAATAGGGCACAGCGAAATTGACGGAGAAAAACGCAAAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATa < 2:295772/230‑1 (MQ=255) tttcccgtgccgtgTACACCCGCCATACGGCGCAGCGAATCTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAg < 2:137548/246‑1 (MQ=255) aTCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑CTTTTT‑TCGCCCC‑CG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CCGGCCCCCCCTTCACATCCCGATTT‑TGGTTT‑CTACGGTGCAAAACTAGATAGTCG‑TGGAACAACTTAATATAct > 1:30982/1‑251 (MQ=255) aTCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCTCC‑TTTTTT‑CCGCCCC‑GG‑CGCGCGCCCAAAC‑ATC‑ACCGCCA‑CTGGCACCCTCTCCACATCCACATTT‑GGGGTG‑CTTCGGGGCAAATCGCGATAATCG‑TGGAACAGCTTATTAGAct > 2:379555/1‑251 (MQ=255) gccgtgTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTcttctt < 1:120517/251‑1 (MQ=255) cccgtgtcccgccGCCCTACGGCGCAGAGAACCTGACGGCGAGAAACGCACAAAACTGCCGGGACCGAGCCACAGTACAGCGAAAAAGTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCGTAATAGACTcttctt < 2:160616/240‑1 (MQ=255) ttCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGCACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTT‑ACGCCCC‑GG‑CGCGCGGCCAAAC‑ATC‑ACCGACA‑CTGGGACCATCTGAACAACCAGAATT‑GGGGTG‑CCACGGGGCAAAACGAGATAGTCG‑TGGAAAAGCGTAATAAACCCTTCTTTCcgcg > 1:396769/1‑251 (MQ=255) cATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTT‑ACGCCCC‑CG‑CGCGCGACCAAAC‑ATC‑ACCCACA‑CTTGCACCCACTGCACATCCAGATTT‑TGGTTG‑CTACGGTGCAAATCGAGATATTCG‑TGGGACAACTTAATAAACTCTTCTTTCTGCggg > 1:351807/1‑249 (MQ=255) ccGCCATACGGCGCAGCGAAGCTGACGGCGAAAAACGCAAAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTaa < 2:189008/251‑1 (MQ=255) gCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACCTCGCC‑TTTTTT‑ACGCCCC‑CG‑CGCGCGGCCAAAA‑ATC‑ACCCACA‑CAGGCACCATCTTCACATCCCGATTT‑GGGGTG‑CTACGGGGCAAATCGAGATTGTCGGTGGA‑CAGCTTAATAGAATCTTCttttctcctgtcat > 2:135226/1‑239 (MQ=255) tACGGCGCAGAGAAACTGACGGAGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCAATTCGCC‑TTTTTC‑AAGCTCC‑GG‑TGAGCGACCAAAC‑ATCCACC‑ACA‑ATGGCACCATCTGCACCTCCAGAATT‑GGGGTG‑GTACGGGGCCAATCGAGATAAGCG‑TGGGAAAGATTAATAAAATCTTCTTTCGGTGGGTAAT‑AGGTg > 1:351693/1‑251 (MQ=255) aCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTT‑ACGCCCC‑CG‑CGCGCGGCCCAAC‑ATC‑ACCGACA‑CTGGCACCCTCTGCACATCCAGGTTT‑TGGTTG‑CTACGGGGCAAATCGAGATAATCG‑TGGAACAGATTAATATGCTCTTCTTTCTGCGTGTAAT‑aaggg > 1:263044/1‑246 (MQ=255) aacagtcGGCGAAAAACGCACAAACGTGTCGAGCCCGAACCACAGTACAGCGAAAAATCTCTGTACGCCTTTGAGAGTACGCAGCGGCGGGTTAACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ACC‑ACCGACA‑CGGGCTCCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCGTCTTTCGTCGTGTAAT‑AGGTGAACACGCGCGGcc < 2:145985/245‑1 (MQ=255) aaCTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAAT‑AGGTGAACACACGCGGcc < 1:570628/251‑1 (MQ=255) gACGGCGAAAAACGCACAAAACGGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAAT‑AGGTGAACACACGCGGCccgcc < 2:90135/251‑1 (MQ=255) gagaAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTT‑ACGCCCC‑CG‑CGCGCGACCAAAC‑ATC‑ACCCACA‑CTGGCACCCTCTGCACATCCAGATTT‑TGGGTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCTGCGTGTAAT‑AGGGGAAAACACGCGGCccgccgg > 1:286871/1‑246 (MQ=255) caaaaacctgccgcgACCGAGCCACAGTACAGCAAAAATTTTCTGTACGCCGTTAAGCATCCGCGGCGGCGGTTTCCCTTCGCC‑TTTTCC‑ACCCCCC‑GG‑CGCGCGACAAAAC‑ATC‑CCCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATATTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAAT‑AGGTGAACACACGCGGCCCGCCGTGAATGAACACAt < 1:237487/240‑1 (MQ=255) aCTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCTCC‑TTTTTT‑ACGCCCC‑CC‑CGCGCGACCAAAC‑ATC‑ACCCACA‑CTGGCACCATCTGCACCACCAGATTT‑TGGTTG‑CTACGGTGCCAATCGAGATAGTCG‑TGGGACAGCTTAATAAACTCTTCTTTCCGCGTGTAAA‑AGGTGAACACACGCCGCCCGCCGTGAATGAAcacaaaacgcg > 1:219333/1‑244 (MQ=255) aGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCCCTTCCCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACC‑CCGGCACCATCCGCACATCCAGATTT‑GGGGTG‑CTACGGGGCAAAACGAGATAGTCG‑CGGAACCGCTTAAAAGACTCTTTTTTCCGCGTGTAAA‑AGGTGAAAACACCCCGCCCGCCGCGAATGAAAACCCAGCGCCGCAGTAGCGGGcc > 1:247979/1‑251 (MQ=255) ccACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCCCTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAAT‑AGGTGAACACACGCGGCccgccg < 1:46761/217‑1 (MQ=255) gAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGATCACCTAGCC‑TTTTTT‑TCGCCCC‑CG‑CGCGCGACCAAAC‑ATC‑ACCCACA‑CTGGCACCACCTGACCAATCAGAATT‑GGGTTGACT‑CGGGGGAAAAAAAGATAGGCG‑TGGAACAGGTTAATAGAATCTTCATTCTGCGTGGAATGAGG‑GGACAAACGGCGCCCGCCGCGAATGAACACATAGCGCGGGAGGAGAGTGGCGGCGAGTTCCAGCg > 1:247964/1‑251 (MQ=255) tcttgaCGCCGTTAAGCATACGCGGCGGCGGGT‑CCCTTCCCCCTTTCTC‑CCCCCCC‑GG‑CCCGCAACGAAAC‑ACC‑CCCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTACAAAGCGAGATAGTCG‑TGAAACAGCTTAATAGTCTCTTCTTTCGGCGTGTAAT‑AGGTAAACACTCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTaa < 1:195054/245‑1 (MQ=255) ttAAGCATACGCAGCGGCGGGTTCACTTCGCC‑CTTTTT‑ACGCCCC‑GG‑CGCGCGACCCAAC‑ATC‑ACCGACA‑CTTGCACCATCTGCACATCCAGATTTTGGGTT‑‑CTACGGGGCAAATCGAGATAATCG‑TGGAACAGCTTAATAGAATCTTCTTTCGGCGTGTAAT‑AGGGGAACACACGCGGCCCCCCGTGAATTAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCCGCGGCTCTAAACGGTCAGGCa > 1:115881/1‑250 (MQ=255) aaGCATGCGCGGGGGCGGGTTCATGTCGCC‑TTTTTC‑CCGCCCC‑GG‑CGCGCGACAAAAC‑ACC‑ACCGACA‑CGGGCACCATCTGCACATCAAGATTT‑GGGTTT‑CTACGGGGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGCCTCTTCTTTCGGCGTGTAAT‑AGGTGAACGCGCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGt < 1:194310/251‑1 (MQ=255) agcagcgccggcggcgGGTTCCCGTC‑CT‑TTTTTC‑CCCCCCC‑GGGCGCGCGACCAAAC‑ACC‑CCCGACT‑CGGGCCCCATTGGCACACCCAGTTTG‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTAAATAGCCTTTTCTTGCGGCGTGTAAT‑GGGTGACCACCCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTc < 2:76068/241‑1 (MQ=255) aGCATCCGCGGCGGCGGGTCCACT‑CCCC‑TTTTTC‑CCCCCCCCGG‑CGCGCGACCAAAC‑ACC‑CCCGACA‑CTGGCACCATCTCCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAAT‑AGGTGACCACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTc < 1:23143/251‑1 (MQ=255) ggcggcgGGTTCCTTTCCCC‑TTTTCC‑CCCCCCC‑GG‑CCCGCG‑CCAAACCATC‑CCCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGTTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTGGGCGTGTAAT‑GGGTGAACCCACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAg < 1:167623/250‑1 (MQ=255) ggcggcgGGTTCACTCCGCC‑TTTTCC‑ACGCCCC‑GG‑CGCGCGCCAAAAC‑ATC‑CCCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAAGCGAGATAGTCG‑TGAAACAGCTTAATAGACTCTCCTTTCGGCGTGTAAT‑AGGGGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAg < 1:143908/250‑1 (MQ=255) ggcggGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGGAAT‑AGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCCGGCAAGTCATGTGCCAGacc > 2:193402/1‑250 (MQ=255) cACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAAT‑AGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGAAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGgcgc > 2:387709/1‑251 (MQ=255) cccc‑TTTTTCCACGCCCC‑GG‑CGCGCGACAAAAC‑ATC‑CCCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGTTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAAT‑AGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCaa < 1:49770/249‑1 (MQ=255) | ATTAAACAGATCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGAT‑AGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCC‑TTTTTC‑ACGCCCC‑GG‑CGCGCGACCAAAC‑ATC‑ACCGACA‑CTGGCACCATCTGCACATCCAGATTT‑GGGTTG‑CTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAAT‑AGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAA > NC_000913/4255813‑4256301 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |