| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,947,850 | 0 | C | T | 26.4% | 116.6 / 16.7 | 53 | E40K (GAA→AAA) | hdfR | DNA‑binding transcriptional dual regulator HdfR |
| Reads supporting (aligned to +/- strand): ref base C (7/32); new base T (14/0); total (21/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.84e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AACTGTAAGCCTGTATGGGCATCCTGATTTTGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGAATTAGGAGCGTGCAGGATGGCGGAAAGCTT > NC_000913/3947600‑3948099 | aaCTGTAAGCCTGTATGGGCATCCTGATTTTGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTc < 2:480344/251‑1 (MQ=255) gTAAGCCTGTATGGGCATCCTGATTTTGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTTATTTTCCAg < 1:361277/250‑1 (MQ=255) aaGCCTGTATGGGCATCCTGATTTTGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGtt < 1:303534/250‑1 (MQ=255) ttGGGCATCATGATTTTGATCCACGCGTCCCAGCCACTGATTAAGCATTCATTCCCACAACGAGGCGCTGGCGCCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCTCCTCCTTACGGGCGGCCTGCCAGGTGCTCATGATCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGACGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGAtt < 2:398394/249‑1 (MQ=255) ggCATCCTGATTTTGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGGG‑AAAAGGTTTACACCC‑AGTTGATTTTTCAGTTGTTTTATTCGa > 1:586392/1‑250 (MQ=255) gATTTTGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAAGGTCAAACCC‑AGTTGGTTTTTCAGTTGTCTGATTTGAAAACTCAcc > 1:451232/1‑250 (MQ=255) gATTTTGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGGGGAAAAGGT‑CACACCC‑AGTTTGTTTTTCAGGTGTCTGATTCTAAAACTCAct > 1:563163/1‑251 (MQ=255) aTTTTGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCActg < 1:576260/251‑1 (MQ=255) ttttGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGGG‑AAAAAGGTCACACCC‑AGTTGATTTTTCCGTTGTCTGATTTGGAAGCTCActtc > 1:375675/1‑249 (MQ=255) aCAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGGTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTg < 1:197401/250‑1 (MQ=255) aGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTGGAAAAGGTT‑ACACCC‑CGTTGATTTTTCAGTTGTCTGATTCGAAAGATCACTGCTGGCTggggg > 1:571700/1‑249 (MQ=255) cccAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGAt < 1:181660/250‑1 (MQ=255) aGGCGCTGGCACTTATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCGCCTTACGGGCGTCCTGCCAGGTGCTCATTAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑tt < 2:361129/251‑1 (MQ=255) aGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAATTGACGCG‑tt < 1:398293/251‑1 (MQ=255) aGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGt < 2:215635/243‑1 (MQ=255) aGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGGTCACACCC‑AGTTGATTTTTCAGTTGTCTGATTCGAAAGCTCACCGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCaaaagagaacggg > 1:215635/1‑241 (MQ=255) ccGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGGTCACACCC‑AGTTGGTTTTTCAGTTGTTTGGTTCGAAAACTCACCGATGGATGGGGCAGAAAGAGGGGTTCAGCCCCTCGAACAAAAGGACGCGGTTCGG‑TAACTTc > 2:568435/1‑251 (MQ=255) tAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAAGGTCACACCC‑AGATGTTTTTTCAGTTGTTTGTTTCGAAAAATCACTGCTGACTGGGTGCGATAGAGGGATTCAGCCGCCCGACCCAAGtaaagcgtgcgggtcactgccacg > 2:451433/1‑228 (MQ=255) gaGAAATCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑Agg < 2:62280/250‑1 (MQ=255) aGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑Agg < 1:174283/250‑1 (MQ=255) tCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGGG‑GAAAAGTTCACACCC‑CGTTGATTTTTCAGTTGTCTGATTCGAAAACTCACTGCTGGCTGGGTCAGATAAAGCGATTCAGCCGCTCGCCCAAAATGACGCG‑TTCGGCTAAATTTC‑AGG‑AAAGattt > 1:405088/1‑251 (MQ=255) cGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGttttt < 1:535018/251‑1 (MQ=255) cGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGtttt < 1:447532/250‑1 (MQ=255) aTGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGGG‑GAAAAGTTTACACCC‑ACGTGATTTTTCCGTTGTCTGATTTGAAAGCTCACTGCTGACTGGGGCAGATAGAGCGATTCAGCCCCCCGAACAAAGTGACGCG‑GTTGGCTAACTTCC‑AGG‑AAAGttttttac > 1:110787/1‑247 (MQ=255) cctTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGctct < 2:571700/249‑1 (MQ=255) gggCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGGG‑GAAAGGATTACACCC‑CGTTGGTTTTTTCGTTTTGTTATTTGAAAACCCACTGCTTACTTGGGCAGAGAGAGGGAGTTAGCCCCTCCACCAAAGTGGAGCG‑GTTGGCTAACTTCC‑AGGGACAGTTTTTAAAAAttacatttcacaccgctcctcccaaa > 2:510754/1‑226 (MQ=255) ccAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCTCCGGCAGCTGTTAAACGGATATTGTGTCTGTTGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATGTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCATATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TGCGGCTAACTTCC‑AGT‑AAAGTGTTTAACAATTCCGTATCCACAGTGCTCTCCTCAAAATTATTTGTCg < 2:520461/251‑1 (MQ=255) cAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGt < 1:310001/251‑1 (MQ=255) gTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTAt < 1:407180/251‑1 (MQ=255) gCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATg < 1:431648/250‑1 (MQ=255) cGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGGGGAAAAGGTTC‑CACCC‑CGTTGATTTTCCCGGTTTCTGGTTTGAAAACTCAATGCTGAATTGGTCAAAAAGAGCGATTCAGCCGCCCGACCAAAATGACGCG‑TTCGGCTAACTTCCCGGG‑AAGGTTTTTAA‑AAATCCCTATTCCCACTGCTCTCCGCCAAAATAttttttgtttttattttaaagt > 1:100962/1‑232 (MQ=255) gCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGGTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGCGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAAtgttttgtt < 2:95254/250‑1 (MQ=255) gCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGATGGTTTTTCAGGTTTTTGATTCGAAAACTCACTGCTGACTGGGGCAGATAGGGCGATTCAGCCGCTCGACCCAAATGGCGCG‑GTCGGCTTACTTCC‑AGG‑GAAGTTTTTAACAATTCCGTATCCACCATGCTCTCCGCAAAATTATTTGTCGTTTTGATTTTAATgttttgtttttcaatc > 1:250713/1‑245 (MQ=255) agtagtTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCCCAGT‑GGTTTTTCAGTTTTCTGGTTTGAAAACTCCCTGCCGGCCGGGTCAGATAGAGGGATTTCGCCGCTCGCCCCAAGGGGAGCG‑GTCGGCTAACTTTC‑AGG‑GAAGTTTTTTAAAATTCCCTTTCCCCAGAGCTCTCCCCAAAATTATTTTTTGTTTTGATTTTAATTTTTTTTTTTTCActctt > 2:125519/1‑250 (MQ=255) cccGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATGCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAAc < 2:234539/250‑1 (MQ=255) ccGGCAGCGGTTAAACGGATTTTGTTTTTGTGGCGGGGG‑AAAAGGGTCACTCCC‑CGTTGATTTTCCAGTGGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACt < 2:35977/251‑1 (MQ=255) cAGCGGTTAAACGGATAGTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATa < 2:254680/251‑1 (MQ=255) gCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACt < 2:451232/251‑1 (MQ=255) gTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCcg < 2:34787/251‑1 (MQ=255) tAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGtt < 2:173372/199‑1 (MQ=255) tAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAAGTTTACACCC‑CGTTGATTTTTCCGTTGTCTGATTCGAAAGCTCACCGCTGACTGGGGCAGATAGAGCGATTCAGCCGCTCGACCAAAGAGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGGTTTTAACAAATCCGTATCCCCAATGCTCTCCGCAAAATTAttttttgtt > 1:173372/1‑193 (MQ=255) cGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCAt < 1:304107/251‑1 (MQ=255) attttttCTGTGGCGGGTG‑AAAAGGTTCAAACCC‑AGTTGAATTGCCAGTTGTCGGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAATCGTAACTAATCCTCCGCGCCATAACt < 2:370174/246‑1 (MQ=255) atTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACt < 1:79798/250‑1 (MQ=255) tCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCg < 2:375675/250‑1 (MQ=255) gggTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGa > 2:440680/1‑250 (MQ=255) gggTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGa > 1:292035/1‑250 (MQ=255) gggTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGa > 2:113486/1‑250 (MQ=255) ggTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGAAt < 1:146739/251‑1 (MQ=255) tCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTacac < 2:146900/189‑1 (MQ=255) tCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTacac > 1:146900/1‑189 (MQ=255) c‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGAATTAGGAGCGTGCAGGATgg > 2:276596/1‑251 (MQ=255) gATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGAATTAGGAGCGTGCAGGATGGCGGa > 2:51547/1‑250 (MQ=255) aTTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGAATTAGGAGCGTGCAGGATGGCGGaaa < 2:292035/251‑1 (MQ=255) ccAGTTTTCTTATTCGAAAGCTCCATGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTGCC‑AGG‑AAAGTTTTTAACAATTCCTTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGAATTAGGAGCGTGCAGGATTGCGGagatctt < 2:528633/250‑7 (MQ=255) | AACTGTAAGCCTGTATGGGCATCCTGATTTTGATACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGGGTG‑AAAAGGTTCACACCC‑AGTTGATTTTCCAGTTGTCTGATTCGAAAGCTCACTGCTGACTGGGTCAGATAGAGCGATTCAGCCGCTCGACCAAAGTGACGCG‑TTCGGCTAACTTCC‑AGG‑AAAGTTTTTAACAATTCCGTATCCACAGTGCTCTCCGCAAAATTATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCAAAGAATTAGGAGCGTGCAGGATGGCGGAAAGCTT > NC_000913/3947600‑3948099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |