New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 517322 | 68 (0.990) | 3 (0.040) | 3/490 | 5.8 | 3.9% | coding (740/780 nt) | fetB | putative iron ABC exporter membrane subunit FetB |
? | NC_000913 | = 3331233 | 81 (1.180) | coding (522/1173 nt) | obgE | GTPase ObgE | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GGCTGATATTTGCCGGGATTGATCCGGTGAAGGCGATTAAATATCAGATTATGGTGACCTTTATGCTGCTCTCAACCGCCAGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/517190‑517322 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCTTTATTCGTGCGGTATCGGCGGCTAAACCGAAAGTGGCGGATTATCCGTTTACCACTCTGGTGCCAAGTCTGGGTGTGGTACGAA‑TGGACAACGAAAAGAGCTTCGTTGTTGCCGATATTCCAGGACTGATTGAAGGCGCTGCGGAAGGCGCAGGTCTGGGCATTCGCTTCCTGAAGCACCTGGAACGTTGCCGCGTCCTGTTGCACCTCATCGATATCGATCCGATTGACGGCACCGATCCGGTT < NC_000913/3331233‑3330987 GGCTGATATTTGCCGGGATTGATCCGGTGAAGGCGATTAAATATCAGATTATGGTGACCTTTATGCTGCTCTCAACCGCCAGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCCTTTATTCGTGCGGTATCGGCGGCTAAACCGAAAGTGGCGGGTTATTCGTTTTCCACTCTGGTGCCAAGACTGGGGGGGGGACGAAAGGGACAA‑GAAAAGAGCTTCGTTGTTGCCccg > 2:551361/1‑248 GATATTTGCCGGGATTGATCCGGTGAAGGCGATTAAATATCAGATTATGGTGACCTTTATGCTGCTCTCAACCGCCAGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCCTTTATTCGTGCGGTATCGGCGGCTAAACCGAAAGTGGCGGATTATCCGTTTACCACTCTGGTGCCAAGTCTGGGTGTGGTACGAA‑TGGACAACGAAAAGAGCTTCGTTGTTGCCGATAT < 1:551361/249‑1 cgTCCTTTATTCGTGCGGGATCGGAGGCTAAACCGAAAGTGGCGGATTATCCGTTTACCACTCTGGTGCCAAGTCTGGGTGTGGTACGAA‑TGGACAACGAAAAGAGCTTCGTTGTTGCCGATATTCCAGGACTGATTGAAGGCGCTGCGGAAGGCGCAGGTCTGGGCATTCGCTTCCTGAAGCACCTGGAACGTTGCCGCGTCCTGTTGCACCTCATCGATATCGATCCGATTGACGGCACCGATCCGGTT < 2:28730/249‑1 GGCTGATATTTGCCGGGATTGATCCGGTGAAGGCGATTAAATATCAGATTATGGTGACCTTTATGCTGCTCTCAACCGCCAGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/517190‑517322 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCTTTATTCGTGCGGTATCGGCGGCTAAACCGAAAGTGGCGGATTATCCGTTTACCACTCTGGTGCCAAGTCTGGGTGTGGTACGAA‑TGGACAACGAAAAGAGCTTCGTTGTTGCCGATATTCCAGGACTGATTGAAGGCGCTGCGGAAGGCGCAGGTCTGGGCATTCGCTTCCTGAAGCACCTGGAACGTTGCCGCGTCCTGTTGCACCTCATCGATATCGATCCGATTGACGGCACCGATCCGGTT < NC_000913/3331233‑3330987 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |