| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,177,748 | 0 | C | A | 30.3% | 108.8 / 23.0 | 76 | E55* (GAG→TAG) | nudF | ADP‑sugar pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (44/9); new base A (0/23); total (44/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAAT > NC_000913/3177503‑3177992 | gCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCaaaa > 2:333123/1‑250 (MQ=255) ccGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTcc > 2:349570/1‑251 (MQ=255) tGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACCTCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑AAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTGCcgccgcc > 1:1038487/1‑250 (MQ=255) gAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCACGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAACTTTCCCGCCGCACCTCAt > 2:469251/1‑251 (MQ=255) aaCTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATg > 1:376908/1‑250 (MQ=255) ttggcccctttgtaCTACCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCCCACTTCCCCCCTCTTCAATCACCCCGGCAACCATCCCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCCCGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGCCCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCg < 1:329805/237‑1 (MQ=255) ttGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGtt > 1:723693/1‑251 (MQ=255) ggcctgttgcccatccggccccGCCTCTTCAGCCGCTTCGCGACGGGCAACATCTTCAACACTTTCCCCCTCTTCAACCATCCCGGCACCCACCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAAGCCAAATTTGCTCAATCAGCACAACTT‑C‑AGCCAGACCTGGGTAAAGGGG‑TAGAAAGACGGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGa < 1:700523/232‑1 (MQ=255) ggTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAACGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTg > 2:714064/1‑250 (MQ=255) attcaaccccccccccGCCTCTTCAATCGCGTCGCGGCGGCAAACATCTCCCCCCCTTCCCCCCGCTTCAACCACCCCGGCACCCCTCCCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTGCGCGGCAATCCGAATCTGCACAACCAGCACAACTC‑C‑ACCACGCACTGGGTAAAAGGG‑TAGCAAGACTGCGGCGTGCCCCCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGAc < 2:202673/238‑1 (MQ=255) gACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGAt > 2:50406/1‑251 (MQ=255) aCTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGAc > 1:202673/1‑247 (MQ=255) tCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACCCTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACg > 1:320423/1‑250 (MQ=255) acacccccGCCTCTCCAATCGCTTCGCGACGGGCAACATCTTCCACCCTTCCCCCCTCTTCAATCACCCCGGCAACCACCTCCAGTAGCCAGGGGTTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACGGGGTAAAAGGG‑TAGCAAGACGGCGGCGTGCCCGCGCTAAAAAATTGCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGAc < 1:210412/244‑1 (MQ=255) catccccgcctcttaatgccctccccgACGGGCACCATCCACCCCACTTCCCCCCTCGTCAATCACCCCGGCACCCACCCCGAGTAGCCAAGGGTTTTCGCTGGTGT‑CGTACGCGTCAATCTGATTCTGCTCAAGCAGAACACCTT‑C‑ATCACGCACTGGGTAAAAGGT‑TAGCAAGCCTGCGGCGTGACCGCACCCAAAAATTGCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGaa < 1:1107290/226‑1 (MQ=255) aGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGCATAGACGATGACGaa > 1:620230/1‑250 (MQ=255) aGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGaa > 2:605562/1‑250 (MQ=255) ccccccctTCCATCCCTTCGCAGCGGGAAACATCTCCCCCACTTCCCCCCTCTTCAACCACCCCGGAACCCATCTCCAGTAGCCAGGGGGTTTCGCTGGTGT‑CGTACGCGGCAACCCGAATCTTCTCAATCAGCACAACTA‑C‑ATCCCGCACGGGGTCAAAGGG‑TACCAAGACTGCGGCGTGACCGCGTTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCta < 2:826298/245‑1 (MQ=255) ccGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCt > 1:826298/1‑250 (MQ=255) tCAATCGCTTCGCGCCGGGCAACATCTCCCACCCTTTCCCCCTCTTCAATCTCCCCGGCACCCATCCCCATTAGCCGAGGGGTTTCGCTGGTGT‑CGTCCGCGCCAATCCGAATCTGCTCAACCAGCACAACTC‑C‑ATCCCCCACTGGGCCAAGGGG‑AAGCAAGCCTCGGGCGTGACCGCGCTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAg < 1:953558/248‑1 (MQ=255) ccctccgcgCCGGGCAACATCTTCCACCCTCTCACCCCCTTCAACCACCCCGGCAACCATCCCCAGTACCCAAGGGTTTCCGCTGGTGT‑CGTCGGCGGAAATCCTAATCTTCTCAACCACCACAACCT‑C‑ACCACGCACTGGGTCAAAGGG‑TAGCAAGCCTGCGGCGTGACCGCTATAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATg < 2:859339/246‑1 (MQ=255) cGCTTCGCAACGGGCAACATCGCCCACACTTTCCCCCTCTTAAACCACCCCGGCAACCATCTCCAGTAGCCAAGGTGTTTCGCTGGTGT‑CGTCCGCGGCAATCCGATTCTGCCCAACCAGCACAACTT‑C‑ACCACGCCCTGGGTCAAAGGG‑TAGCAAGACTGCGGCTTGCCCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTaa < 1:947989/249‑1 (MQ=255) gcgACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGaaaaa > 1:71469/1‑250 (MQ=255) cgACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGaaaaaa > 2:69271/1‑250 (MQ=255) gACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCCCCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGaaaaaa > 2:449290/1‑249 (MQ=255) ggggCAACATTTTCCACTCTCTCCCCCTCTTCAATCACCCGGGCAACCATCTCCAGGAGCAAGGGGGTTTCGCTGGTGC‑CGTTCGCGGCAACCCGAATGTGCACAACCAGCA‑AACTTTC‑ACCCCGCAGGGGGTAAAAGGG‑TAGAAAGACTGCGGCGTGCCCGCTCTCAAAATTTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGcc < 1:449290/250‑1 (MQ=255) cATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATa > 2:592847/1‑250 (MQ=255) aTCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCACGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATaa > 2:237207/1‑250 (MQ=255) aTCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATaa > 1:617128/1‑250 (MQ=255) ttcccccTTTTCAATCACCCCGGCAACCATCCCCAGTAGCCAGGGGGTTTCGCTGG‑GTGCGTACGCGGCAATCCGAATCTGCTCAATCAGCACACCTT‑C‑ATCACGCACGGGGTAAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTtctc < 1:763806/244‑1 (MQ=255) tcccccTCTTCAATCACCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCGGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAACCAGCACAACTT‑C‑ACCACGCACTGGGTAAAAGGG‑TAGAAAGACTGCGGCGTGACCGCGCTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTg < 1:333123/247‑1 (MQ=255) cACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGc > 2:38223/1‑250 (MQ=255) cACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGc > 1:826510/1‑250 (MQ=255) tCAATCTTCCCGCCAACCCTCTCCAGTAGCCAGGGGGTTTCGCTGGTTT‑CGTGCGAGTAAATCCGATTATGCTAAAGCAGCACA‑CTT‑CCATCACGCAAGGGATAAAAGGG‑TAGAAAGACTGCGGCGTGCCCCCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACTATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCaataat < 1:469251/248‑1 (MQ=255) atcatcCCGGCAACCATCTCCAGTAGCCCAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTAc > 2:864783/1‑251 (MQ=255) atcCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATc > 1:775265/1‑251 (MQ=255) cAACCATCCCCAGTAGCCAAGGGTTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACGGCGGCGTGACCGCGCTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTg < 1:50406/251‑1 (MQ=255) aaCCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGGGTTTCTCGGGCATTAATTTcacaaccgtttttgc > 2:602314/1‑237 (MQ=255) ccaccacagtcagcaaaGGGTTTCCGCTGGTGT‑CGTACGCGGAAATCCGAACCTGCTCAACCAGCACAACTA‑C‑ACCGCGCACTGGGTCAAAGGG‑GAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCa < 2:348084/236‑1 (MQ=255) cAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTa > 1:931758/1‑250 (MQ=255) cAGTAGCCAAGGGGTTTCGCTGGTGC‑CGCACGCGGCAACCCGAATCTGCTCAACCACCACAACTC‑C‑ACCCCGCACTGGGCAAAAGGG‑GAGCAAGACTGCGGCGTGCCCGCGCTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAAGGTaa < 1:349570/251‑1 (MQ=255) gaaGCCAAGGGGTTTCTCTGGGGT‑CGTACGCGCAAATCCAAACCTGCCCAATCAGAACAACTT‑C‑ACCCCGCATGGGGTCAAAGGG‑TAGAAGGACTGCGGCGTGCCCGCGCGAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACg < 2:91519/249‑1 (MQ=255) acgCCAAGGGTTTTCGCTGTGGT‑CGTACGCGGCAACCCGAACCTGCTCAATCAGCACACCTT‑C‑ATCCCGCACTGGGTCAAAGGT‑TATAAAGACTGCGGCGTGACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACg < 2:964585/248‑1 (MQ=255) aaGGGGTTTCGCTGGTGT‑CGCACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCAAGACTCATTTGCCCGCTGAATAGCCGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAgg > 2:1020343/1‑251 (MQ=255) tCGCGGGTGT‑CGTACGCGGCAACCCAAATCTGCTAAAACAGCACACCTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGCCCGCGCAAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTg < 1:326248/250‑1 (MQ=255) ggcGTACGCGGCAATCCGAATCTCATCAACCAGCACACCTT‑C‑ATCACGCAGTGGG‑CAAAGGGGTAGAAAGACGGCGGCGTGACCGCTCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCa < 1:461370/249‑1 (MQ=255) ccGTACTCGGCACCCCGACTCGGCTCAAACCGCACAACTT‑A‑ATAACGCATTGGGACAAAGGG‑TGGCAAGCCTGCGGCCCCCCCGTTCTCAAAAATCTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACTAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTACCAAATGTAACGGGCAGGTTGTCTGGCGTAAGCAt < 1:53586/250‑1 (MQ=255) aCGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCCCCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATAGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGtt > 2:1041917/1‑251 (MQ=255) cgcgGCATTCCGAATCTGCTCAACCACCACAACTT‑C‑ATCCCTCCCGGGTTAAAAGGG‑TACCAAGACGGCGGCGTGACCGCGCACAAAATTTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTa < 1:658225/251‑1 (MQ=255) ggCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATg > 2:613810/1‑251 (MQ=255) ggCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATg > 1:832478/1‑251 (MQ=255) aatcgaaaTCTGCTAACTCAGCACACCTC‑C‑CCCACGCACTGGGTAAAGGGG‑TAGCAAGGCGGCGGCGGGACCGCACTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTcc < 2:1011392/245‑1 (MQ=255) aagccaaatcggcccAATCAGCACCACTT‑T‑CTCCCGCCCTGGGAAAAAGGG‑TAGCAAAACCGGGCCTTGACCGCGCTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGGTAATGTcc < 1:1148045/237‑1 (MQ=255) aaTCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTcc > 2:30174/1‑251 (MQ=255) aaTCCGAATCTGCCCAATCACCACAACTT‑C‑ACCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCACAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTcc < 1:595272/251‑1 (MQ=255) ccGAATCTGCTCAATCAGCACAACTC‑C‑ATCCCTCACTGGGTCAAGGGG‑TAGCAAGCCTGCGGCGTGCCCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTgg < 1:285219/251‑1 (MQ=255) cGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGc > 1:1019088/1‑251 (MQ=255) aaTCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCAc > 2:62045/1‑251 (MQ=255) aTCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACt > 2:283531/1‑251 (MQ=255) gCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCAATGTTAATGTCCTGGCACTAAt > 2:512072/1‑250 (MQ=255) accacaACTC‑C‑ACCACGCATTGGGTCAAAGGT‑TAGCAAGATTGCGGCGTTACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTa < 2:917358/249‑1 (MQ=255) caACTC‑C‑ATCCCGCCCTGGGTCAAAGGG‑TCGCAAAACTGCGGCGCTCCCGCGTTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAAtg < 1:592847/251‑1 (MQ=255) aaCTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTATTTACCTGGCACTAATAGTGAATTAAAtgt > 2:252945/1‑251 (MQ=255) t‑c‑atcaCGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCCTTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAt > 2:15656/1‑251 (MQ=255) atcaCGCACTGGGTCAAAGGG‑TAGCAAGACGGCGGCGTGCCCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAttt < 1:30174/251‑1 (MQ=255) cccGCACTGGGTAAAGGGG‑TACAAAGCCGGCGGCGTGCCCGCGCTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAttt < 2:805387/247‑1 (MQ=255) gCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGACAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCg > 2:1117158/1‑251 (MQ=255) aCTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGAc > 1:492709/1‑251 (MQ=255) tcccgatctagaaggACTGCGGCGGGACCGGCCAAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTg < 2:1023094/236‑1 (MQ=255) aGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGc > 1:254734/1‑251 (MQ=255) aGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTg > 1:1023094/1‑241 (MQ=255) aaaGACGGCTGCGTGCCCGCTCTAAAAATTTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGa < 1:252945/250‑1 (MQ=255) aGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGCAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGc > 1:487014/1‑251 (MQ=255) tGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCCGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGAAGTc > 2:1078542/1‑251 (MQ=255) cgcgCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAAt > 2:917054/1‑251 (MQ=255) gcTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCtt > 1:621190/1‑160 (MQ=255) | GCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGT‑CGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTT‑C‑ATCACGCACTGGGTCAAAGGG‑TAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAAT > NC_000913/3177503‑3177992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |