| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,483,254 | 0 | G | A | 29.5% | 87.1 / 10.5 | 44 | S29L (TCA→TTA) | emrK | tripartite efflux pump membrane fusion protein EmrK |
| Reads supporting (aligned to +/- strand): ref base G (23/8); new base A (0/13); total (23/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAACCGTGGCTTTT > NC_000913/2483006‑2483503 | ataGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGa > 1:227279/1‑250 (MQ=255) ttATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGc > 1:265114/1‑251 (MQ=255) cGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGGGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCaata > 2:743974/1‑250 (MQ=255) gTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCaataa > 1:243899/1‑250 (MQ=255) ttGCCGAACAATATGTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCaataaat < 2:557567/250‑1 (MQ=255) aaTATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCg < 1:622775/251‑1 (MQ=255) aGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATaa > 1:794047/1‑248 (MQ=255) attTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGt > 2:335557/1‑251 (MQ=255) tttAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTAtt > 1:235049/1‑251 (MQ=255) agttttATTGAGGGCGATGGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCCCCTTGTC‑GAACGTAGTTCGTATTTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GGGCAGAAATTGGATCTGCATTCCCCGTGACATGGGCGTCATCTGTACTAATCATGTCTTCTAAT‑CCCATTGACCAATAGGCAT‑AGCCCCCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTttc < 1:433329/248‑1 (MQ=255) gTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGa > 1:491112/1‑250 (MQ=255) gatggtgtcatcgtttttATCCATTAAAACTAAAAGCTC‑CCCTGTCCGAACGTATTTCTTTTTTTTATGATTATCGCCAGTAAC‑ACTCCCGGAGATTT‑GTGCAAAAATTTAATCTGCATCCCCCTTAACATGGCCGTCATCTTTACTATTCATGTCTTC‑AATACCCATTGCCCAATAACAAA‑AGACCCTTAAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtt < 2:265114/237‑1 (MQ=255) atggactgctgTTTTACCCTGTGAAACAAAAATGTCCCTTTGTC‑GAACGTAGTTCTTTTCTTTGTGATTAACTACATGGCC‑CCTACATGAGATTT‑GTGCAGAAATTGTATCTTCATTCCCCTTGAAATAGGCTCCTTCTGTACTAATCATGCCTTCTAAT‑TCTATTAACAAATAGGAAT‑AGGCACCTAAAACCGAAAAAAAAAATCCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGttttt < 2:233682/241‑1 (MQ=255) tcccaaggAAACTAAAATGTCACCTTGTC‑GAACTTAGTTCTTCTCTTTTTGATTACCGACAGTGAC‑ACCCCCGGACACTT‑GTGCATAAATTGGATCGCCATTCCCAGTGACACAGTCGTCCTCTGTCCTAAGCTTGTCTTCTAAT‑TCCATTGCCCAATAG‑CATTAGCCCCCTGAAAACGCAAAAAAAAAAAGTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAGTTAATc < 1:793212/243‑1 (MQ=255) cccAGTGAAATTAAATTGTCCCCTTGTC‑GAACGTATTTCTTTTCTTTTTAATTAACGACAGTGAC‑CCTTCCTGA‑ACTTTGTGCAAAAATTGGATCTGCATTCCCCGTGACATAGGCGTCTTCTGTACTAATCATGTCTTCTAAT‑CCCATTGACCAATGGGCAA‑AGGCCCCGAAAAACCAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTg < 1:564825/250‑1 (MQ=255) gtaaaaCTAAAATGTCACCTTGTC‑AAACGTAGTTGGTATTTTTATGATTAACGACAGGGCC‑CCTCCCGGAGATTT‑TTGAAGAATTTGGTTCTCCATTCCCCGTGACAGAGGCTTCATCTTTACTAATCATGTCTTCAAAT‑TCAATTGACCAATAGGCAT‑AGCCACCTAAAAACTCAATAAATAAACTTTCCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTcc < 2:568027/248‑1 (MQ=255) tAAAATGTCACTTTGTC‑GTACGTTGTTCGTTTCTTTAGGATTAACGACAGTGAC‑TCTACCTAAGACTT‑GTGAAAATATTTGATCTGCATTCCCCGTTACATAGGCTTATTCTGTACTAATCATGTCTGCTAAT‑TCAATTGACCAAAAGGCAA‑AGCCACCTGAAAACGAAATAAATAATACTCCCGCCAATAAATAAAAGTATTTTCGTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtatt < 1:260401/250‑1 (MQ=255) gaccctcttccgatgtaaacttAGTTCTTATTTTTATGATTAACGCCAG‑GACCACTCCCTGGGATTT‑TGGCAAAAATTGGATTTCCTTTCCCGGTAACATAGGCTTCATTTGTACAAATCATGTTTTCAAAT‑TCCATTGACAAATAGCAAT‑AGGCACCTAAAACCGCAAAAAATAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtattat < 2:804358/230‑1 (MQ=255) cACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCAt > 1:560931/1‑251 (MQ=255) cTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTtc > 1:748852/1‑251 (MQ=255) gAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtattat > 1:804358/1‑235 (MQ=255) aTTAACGACAATGAC‑ACACCCTGAGATTT‑GTGGAAAAGTTTGATCTGCATTCCCCGGAACGTAGGCGTCATCTGTACTAATCGTTTCTTCTAAT‑CCCATAGCCCAATAGCCGA‑AGGCCCCTAAAACCGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATtgaatga < 1:298418/251‑1 (MQ=255) cAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGc > 1:791747/1‑250 (MQ=255) aGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGaa > 1:272310/1‑184 (MQ=255) aGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcat > 1:65138/1‑251 (MQ=255) acaatACCTGAGACTT‑GTGAAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACAAATCATGTCTTCAAAT‑TCCATTGACCAAAAGGCAT‑AGGCACCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattcat < 2:245184/247‑1 (MQ=255) acTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCattcattc > 1:207739/1‑251 (MQ=255) cccTGAGACTG‑GTGAAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACAAATCATGTCTTAAAAT‑CCCATTGACAAATAGGCAT‑AGGCCCCTGAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttctt < 1:289354/249‑1 (MQ=255) cagggtcgtgttgCAGAATTTGGACCTGCATTCCCCGGTACATAGGCGTCATTTGTACGAATCTTGTCTTCTAAT‑GCCATTGACCAATAGACAT‑GGGCCCCTAAAAACACAATAAATAAATTTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCa < 2:587897/240‑1 (MQ=255) aGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTg > 1:721106/1‑251 (MQ=255) gCATCCCCCGTGCCATAGGCGTAATCTTTCTTAATAAGGTCTTCTATT‑CCCATTGAACAATAGGCAG‑AGCCACCTGAAAACACAAAAAATAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATGCATTCTTCATATCAAACACAGTTCATGTGTTGcac < 2:298846/250‑1 (MQ=255) cccatgaaaTAGGCGTCATCTTTACAAATAATGTCTTAAAAT‑CCCATTGACCAATAGGCAA‑AGCCACCTAAAACCGAAAAAAAAAAAACTTCCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATcc < 2:235049/243‑1 (MQ=255) ccGTGACATAGGCGTCATCTGTACTAATCATTTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTAAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATccc < 1:437624/251‑1 (MQ=255) gTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATccc > 1:506771/1‑249 (MQ=255) gTACTAATCATGTCTCCTAAT‑TCCATTGCCCAATAGGCAT‑AGGCACCTGAAAACGCAAAAAAAAAAACTTCCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTa < 1:85700/249‑1 (MQ=255) cTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAAttt > 1:763997/1‑250 (MQ=255) attCATGTTTTCAAAT‑CCCATTGCCCAATAGGCTT‑AGCCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCAGTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTaa < 1:743974/248‑1 (MQ=255) aaTCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTg > 1:453097/1‑94 (MQ=255) cATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATg > 1:224770/1‑250 (MQ=255) aT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCaaaaa > 1:839219/1‑250 (MQ=255) ccATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAaac > 2:842711/1‑251 (MQ=255) acatgtaccaataggattgagcaCCTAAATACGAAATAAATAAAATTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAAGACAGTGCATGTGTTGCACATTATACCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAACAAaac < 2:565230/231‑1 (MQ=255) aaaaggcat‑agccaACTAAAAACGAAAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGa < 2:603404/248‑1 (MQ=255) at‑aggcaCCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAAcc > 1:289964/1‑251 (MQ=255) gAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTAATATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCACAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGCCTAAACCGCGGCtttt > 2:478356/1‑250 (MQ=255) | ATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC‑GAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC‑ACTACCTGAGACTT‑GTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAT‑TCCATTGACCAATAGGCAT‑AGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAACCGTGGCTTTT > NC_000913/2483006‑2483503 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |