Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,101,395 Δ11,672 bp wbbLrfbB wbbL, insH7, wbbL, wbbK, wbbJ, wbbI, wbbH, glf, rfbX, rfbC, rfbA, rfbD, rfbB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2101395 2113066 11672 69 [0] [0] 69 wbbL–rfbB wbbL,insH7,wbbL,wbbK,wbbJ,wbbI,wbbH,glf,rfbX,rfbC,rfbA,rfbD,rfbB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 21013940 (0.000)69 (0.730) 63/484 0.3 100% intergenic (‑126/+2) gnd/wbbL 6‑phosphogluconate dehydrogenase, decarboxylating/interrupted rhamnosyltransferase WbbL
?NC_000913 2113067 = 0 (0.000)intergenic (‑6/+367) rfbB/galF dTDP‑glucose 4,6‑dehydratase 1/UTP:glucose‑1‑phosphate uridylyltransferase, low activity

TCCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATATTACGGGTGAAAAACTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAA  >  NC_000913/2101150‑2101638
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                    
tcCGGCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATtta                                                                                                                                                                                                                                                   <  1:541867‑M1/248‑4 (MQ=255)
  cGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattcc                                                                                                                                                                                                                                               >  2:428667‑M1/1‑243 (MQ=255)
   gTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccat                                                                                                                                                                                                                                             >  2:167781‑M1/1‑242 (MQ=255)
   gTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccat                                                                                                                                                                                                                                             >  2:168653‑M1/1‑242 (MQ=255)
   gTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccat                                                                                                                                                                                                                                             <  2:135589‑M1/251‑10 (MQ=255)
      ttctCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatatt                                                                                                                                                                                                                                          >  1:222109‑M1/1‑239 (MQ=255)
                       gAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctg                                                                                                                                                                                                                          <  1:246582‑M1/250‑29 (MQ=255)
                        aaaaTAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtg                                                                                                                                                                                                                        <  1:563628‑M1/251‑31 (MQ=255)
                          aaTAGAGACGTTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCAGACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTTTGATCACCGCTCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGGATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaa                                                                                                                                                                                                                      <  1:324740‑M1/251‑33 (MQ=255)
                                      ataACCCCGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctct                                                                                                                                                                                                          <  1:530425‑M1/251‑45 (MQ=255)
                                                 tttCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgatt                                                                                                                                                                                                >  2:573185‑M1/1‑196 (MQ=255)
                                                    cGATGTTGAGCGCAAGGTGGCGTCCCATCACTGCCATTCCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgatcaat                                                                                                                                                                                             <  2:516352‑M1/250‑58 (MQ=255)
                                                                     ttGCGTCCCATCACTGCCATACCGACTACGACGAACTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGCTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgc                                                                                                                                                                           >  1:70877‑M1/1‑176 (MQ=255)
                                                                         gTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctacc                                                                                                                                                                       >  1:329852‑M1/1‑172 (MQ=255)
                                                                         gTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctacc                                                                                                                                                                       >  2:712599‑M1/1‑172 (MQ=255)
                                                                              aTCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccc                                                                                                                                                                  >  1:43379‑M1/1‑167 (MQ=255)
                                                                                 aCTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctgg                                                                                                                                                               >  2:783431‑M1/1‑164 (MQ=255)
                                                                                    gCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGCATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctt                                                                                                                                                            <  1:70489‑M1/251‑91 (MQ=255)
                                                                                         aCCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttaca                                                                                                                                                        <  2:182069‑M1/250‑95 (MQ=255)
                                                                                                aCGCCGAGCTGTTGCTTGGACATTACATACTCCTGTCAGGGGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAAGAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataggcggctcccagtttgattaatagaggtattaatgcacgctaccgcccctgtctttacagctacca                                                                                                                                                 <  2:222109‑M1/250‑102 (MQ=255)
                                                                                                  gCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccag                                                                                                                                                >  1:550086‑M1/1‑147 (MQ=255)
                                                                                                  gCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGACCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAATTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagaacatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagag                                                                                                                                              <  2:12945‑M1/251‑105 (MQ=255)
                                                                                                      aTCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcact                                                                                                                                          >  2:267560‑M1/1‑143 (MQ=255)
                                                                                                      aTCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcact                                                                                                                                          >  1:291225‑M1/1‑143 (MQ=255)
                                                                                                       tCTGTGGCTTGGACATTACATACTCCTGTCAGGTGTGATCTCCGCGCTGAATGATAGCGCCCTGGAATGTTCGCAACTAAGAATACAAAGTACTTATTAACGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagaggctctcagtttgattaatagagggattaatgcacgctaccgcccctgactttacagctaccagagcactg                                                                                                                                         >  2:648250‑M1/1‑142 (MQ=255)
                                                                                                          gTTGCTTGGACATTACATACTCCTGTCGGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctcccagagcactgcgt                                                                                                                                      >  1:593330‑M1/1‑139 (MQ=255)
                                                                                                            tGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgc                                                                                                                                    >  2:167971‑M1/1‑137 (MQ=255)
                                                                                                            tGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgc                                                                                                                                    >  1:222950‑M1/1‑137 (MQ=255)
                                                                                                                          aTACTCCTGTCAGGTGTGATCACCGCGCTGACTGATCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtg                                                                                                                      >  2:717010‑M1/1‑123 (MQ=255)
                                                                                                                                          tgATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccact                                                                                                      >  1:107725‑M1/1‑107 (MQ=255)
                                                                                                                                           gATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATACGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactc                                                                                                     >  2:390792‑M1/1‑106 (MQ=255)
                                                                                                                                           gATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactc                                                                                                     <  1:32607‑M1/251‑146 (MQ=255)
                                                                                                                                            aTCACCGCGCTGAATGCTCGCGGTCGGGAATGTTCGCAAATAAGGATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGTTTTATttattccatattacttcagagcatgctgggaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggcattacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcg                                                                                                    <  2:631929‑M1/251‑147 (MQ=255)
                                                                                                                                              cACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgc                                                                                                   <  2:550086‑M1/250‑148 (MQ=255)
                                                                                                                                                ccGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgct                                                                                                <  1:750868‑M1/251‑151 (MQ=255)
                                                                                                                                                   cgcTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaa                                                                                              >  2:686619‑M1/1‑98 (MQ=255)
                                                                                                                                                           gagcgcggccTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTGTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctaggatgtgacgagcgttacccactcgcgctaatcccgaaa                                                                                      <  2:293642‑M1/247‑161 (MQ=255)
                                                                                                                                                           gCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaa                                                                                      >  1:286193‑M1/1‑90 (MQ=255)
                                                                                                                                                                     tGGAATGTTCGCAGATAAGTATACAAAGTACTAATTAAAGTATAACTAGCTTATACATGCTTATATGCTTACGACTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcaagctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgagctaaacccgaaaaattcaaacgc                                                                           >  2:673692‑M1/1‑80 (MQ=255)
                                                                                                                                                                      ggAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacg                                                                            <  2:286193‑M1/249‑171 (MQ=255)
                                                                                                                                                                       gAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgcta                                                                         <  1:82812‑M1/251‑174 (MQ=255)
                                                                                                                                                                         aTGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaat                                                                       >  1:689761‑M1/1‑76 (MQ=255)
                                                                                                                                                                           gTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaatt                                                                      <  1:428667‑M1/250‑177 (MQ=255)
                                                                                                                                                                               gCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtctt                                                                 <  1:318307‑M1/251‑182 (MQ=255)
                                                                                                                                                                                     aaGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaat                                                           >  1:670713‑M1/1‑64 (MQ=255)
                                                                                                                                                                                           aCAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctc                                                     <  1:167781‑M1/251‑194 (MQ=255)
                                                                                                                                                                                             aaaGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctg                                                   >  1:561546‑M1/1‑56 (MQ=255)
                                                                                                                                                                                             aaaGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgccaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctg                                                   >  1:414506‑M1/1‑56 (MQ=255)
                                                                                                                                                                                                          aaGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaaccc                                                                                          >  2:154405‑M1/1‑43 (MQ=255)
                                                                                                                                                                                                          aaGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaaccc                                                                                          <  1:154405‑M1/199‑157 (MQ=255)
                                                                                                                                                                                                                   tAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaa                              >  2:452920‑M1/1‑34 (MQ=255)
                                                                                                                                                                                                                    aGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaa                             >  1:662035‑M1/1‑33 (MQ=255)
                                                                                                                                                                                                                        tATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaacttt                        >  2:15412‑M1/1‑29 (MQ=255)
                                                                                                                                                                                                                         aTCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttg                       <  1:747827‑M1/251‑224 (MQ=255)
                                                                                                                                                                                                                           ccATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttga                      >  2:107159‑M1/1‑26 (MQ=255)
                                                                                                                                                                                                                             aTGCTTATATTCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctgga                                                 <  2:140928‑M1/221‑198 (MQ=255)
                                                                                                                                                                                                                             aTGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctgga                                                 >  1:140928‑M1/1‑24 (MQ=255)
                                                                                                                                                                                                                               gCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcg                                                                                                  >  2:635303‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                               gCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgcggggaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcg                                                                                                  <  1:635303‑M1/170‑149 (MQ=255)
                                                                                                                                                                                                                                cTTATATGCTTACGGCTTTCTttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgcactggaaacaaggaaaatcctggaaatctttgaataaa                 >  1:23972‑M1/1‑21 (MQ=255)
                                                                                                                                                                                                                                  tataTGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaacc              >  1:336021‑M1/1‑19 (MQ=255)
                                                                                                                                                                                                                                   atatGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccc             >  2:818762‑M1/1‑18 (MQ=255)
                                                                                                                                                                                                                                       gCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcattttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaagtcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctac          <  2:107725‑M1/250‑237 (MQ=255)
                                                                                                                                                                                                                                        cTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactg        >  2:850788‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                           aCGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactgct      >  1:571374‑M1/1‑10 (MQ=255)
                                                                                                                                                                                                                                           aCGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaagagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactgcta     <  1:448324‑M1/251‑242 (MQ=255)
                                                                                                                                                                                                                                              gCTTTATttattccattttcctgaagagcatgctgtgaaataagcggctctcagtttgatttataggggtatgaatgcacgcttccgcccctggctttacagctaccagagcgctgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggagaactttgaataaaaccctactgctaact  <  2:744676‑M1/251‑245 (MQ=255)
                                                                                                                                                                                                                                              gCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactgctaact  <  1:573185‑M1/251‑245 (MQ=255)
                                                                                                                                                                                                                                              gCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactgctaact  >  1:155454‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                    
TCCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATATTACGGGTGAAAAACTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAA  >  NC_000913/2101150‑2101638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: