Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 941,713 | 0 | T | G | 20.9% | 102.7 / 10.0 | 43 | V252G (GTG→GGG) | dmsA | dimethyl sulfoxide reductase subunit A |
Reads supporting (aligned to +/- strand): ref base T (4/30); new base G (9/0); total (13/30) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.27e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CTGGGCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTGCGCCGAAAAATGGC > NC_000913/941472‑941963 | cTGGGCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑GGGCTTACtt > 1:408291/1‑250 (MQ=255) gggCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACGTACTAt < 1:286715/250‑1 (MQ=255) gACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCa < 1:423084/250‑1 (MQ=255) cGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTCCGGCGACTACTCCTCCGCGCAAATTTCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGTG‑CTTACTAttctgacacagcaaaccc > 1:261776/1‑234 (MQ=255) cgggCCGCCGGTAAATTCCCTGGTCGAGCGGCTGATGCACGGCAGGGGCGGCTATCTGAACCATGACGGCGACTAATCCACCGCGCAAATTGCGGAAGGTTTGATCTATACCTACCGCGGCTGGGCAGATCGCACCAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCGTGGCGAAACGCGAATGTGTGGTGGTGGTG‑TGACTGACTATCTGGAACAGGCACGACAGAAAt < 2:231931/249‑1 (MQ=255) cgGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑cc < 1:439043/251‑1 (MQ=255) gggAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑ccc < 1:335272/251‑1 (MQ=255) ggTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGatcat < 1:49353/249‑1 (MQ=255) gTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCAGTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGGTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGACAGAAATCTAAT‑G‑CCCGCATGatcagcat < 2:336855/251‑1 (MQ=255) ggCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCcg < 1:101423/251‑1 (MQ=255) aaCTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGGGCTATAc < 1:89816/251‑1 (MQ=255) gctgcGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGac < 1:252410/251‑1 (MQ=255) cggcTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑GGGCTTTATATCTTTAACAGGGACGCCCGAAAACTAAT‑GGCCCCCATG‑TCATCCTCGAACCCCGCTTAACCGAC‑AACGGTg > 1:280510/1‑251 (MQ=255) aTCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCgg < 2:294783/250‑1 (MQ=255) aCGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGG‑GGACTTTCTATTTTTAAAAAGCACGCCCGAAAACTAAA‑G‑CCCCCCTGATCATCATCGCTCCGCGCTATACCCAC‑ACCGGGGCCGGGCGCGGAGATg > 1:257321/1‑249 (MQ=255) ccctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTAt < 2:230859/250‑1 (MQ=255) ccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑g < 2:94387/250‑1 (MQ=255) aTTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAAc < 2:278207/251‑1 (MQ=255) gAAGGTTGTAACTATACCTACGGAGGCTGGGCAGATGGCAACAGACCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATATCACTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGACCAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGc < 2:277423/251‑1 (MQ=255) aGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCg < 1:159826/251‑1 (MQ=255) ataCCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAAc < 1:228835/251‑1 (MQ=255) ggCAACAGCCCGTCGGATATCGAAAACATTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCAc < 2:176637/251‑1 (MQ=255) ggCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCAc < 1:131491/251‑1 (MQ=255) ggCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCAc < 1:241389/251‑1 (MQ=255) aGCCCGTCGGTTATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGTCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGaaaa < 2:283996/251‑1 (MQ=255) cccGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAAcc < 1:328962/251‑1 (MQ=255) ccGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAGCCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCt < 1:64144/251‑1 (MQ=255) ccGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑GGGCTTACTATCTTTAACAGGCACGCCAGAAAACTAAA‑G‑CCCGCATGATCATCATCGATCCGCGCTATAACGAC‑ACCGGGGCCGGGCGCGAAGATGAGGGGGTTCCTATT‑T‑GTCCGGGAAAAGA‑AGCCGCACTGGGTAACGGGCTGGGGTaaggcctgaaccctgaaaaacc > 1:194676/1‑230 (MQ=255) cGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCCAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGGGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGGGTACGTTCTGATCACTTAAAACCtggtg > 1:249613/1‑251 (MQ=255) atatCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGAt < 2:374840/251‑1 (MQ=255) aaCAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑GGACTTACTATCTTGAAAAGGCACGCCAGGAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGGGCCGGGGGCGAAGATGAGGGGATCCCTTTT‑C‑GTCCGGGGAAAGA‑TGCCGCACTGGGTAACGGGCTGGCGGACGTCATGATCACTGAAAAACTGGTGGGTCaagcctt > 1:277520/1‑245 (MQ=255) aGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCt < 2:269203/251‑1 (MQ=255) gTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑GGACTTACTATCTTGTACAGGGACGCCAGAAATCTAAA‑G‑CCCGCCTGAACATCATCCATCCCCGCTATACCGAC‑ACCCGGGGCGGGCGCGGAGAGGGGGGGGTCCCCATT‑CCGCCCGGGAA‑AGA‑AGGCGCCCCGGGTAACCGGCTGGCGTACGGCACGATAACCGAAAACCCGGGGGATCAGGCATTCCTc > 2:4743/1‑251 (MQ=255) cTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGGCTTTTTATCTTGAAAAAGCACGCCCGGAAACTAAT‑T‑CCCGCATGCTCATCATCGATCCGCGCGATACCCACCACCGG‑GCCGGGCGCGAAGATGAGGGGATCCCTATT‑C‑GTCCGGGGAAAGAATGC‑GCCCTGGTTTTCGGTCTGGCGTACGTCATGATCAATGTAAACCTGGTGGGTCAGGCATTTCTTGATa > 1:430748/1‑250 (MQ=255) cTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑GGACTTACTATCTTGAACAGGGCCGCCAGAAATCTAATTG‑CCC‑CCTGATCATCATCGATCCGCGCTATACCGCC‑ACCGGTGGCGGGGGCGAAGATGAGTGGGTCCCTATT‑T‑GTCCGGGGACAGA‑TGCCGCACTGGGTTACGGGCTGGCGGACGGCATGATCACTGAAAACCCGGTGGATTAGGCCTTCCTCggta > 1:155386/1‑247 (MQ=255) ggTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATaa < 1:87125/249‑1 (MQ=255) ggCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGc < 2:184768/250‑1 (MQ=255) tttGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑GGACTTTCTATTTTTAACAGACCCGCCAAAAATCTAAT‑A‑CCCCCATGTTCATCCTCGCACCGCGCTATACCGAC‑ACCCGGGCCGGGCGCGAACATGAGTGGATCCCTATTTC‑G‑CCGGGGACCGG‑TGCCCCGCTGGTTGATGGTCTGGCCTCCGGCATGTTCACTGTAAACCTGGTGGGTCAGGCATTTCTCCATAAATATTGCGTTgt > 1:80332/1‑250 (MQ=255) tttGGTAATAACCCTGGCGAAACGCGAAAGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTg < 2:80332/250‑1 (MQ=255) ggTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTa < 2:155386/251‑1 (MQ=255) aCCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑GGACTTACTATCTTTAACAGGCACGCCAGAAATCTAAT‑T‑CCCGCATTGTCATCCTCGATCCGCGCTATACCCAA‑ACCAGCGCCGGGGGCGGAGAAGAGTGGATCCCCCTT‑C‑GTCCGGGAACAAA‑TGCCGCCCTGGTTAACGGTCTCGCGTACGTCATGATCACTGTAAAACTGGTGGGTCAGGCATTCCTCGATAAATATTGCGTTGGCGACGATg > 1:433909/1‑249 (MQ=255) ggCGAAACGCGAATGAGTGGCGGTGGGG‑TGAATTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTTCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCGCGATAAATATTGCGTTGGTTACGATGAGAAAAc < 2:425118/251‑1 (MQ=255) gg‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCAGCGCTATACCGAC‑ACCGGAGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGATGGCTACGATGAGACAACCCTGCCAGCCAGTGCGCCGAAAAATg > 2:89094/1‑251 (MQ=255) tGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTGCGCCGAAAAATGGc > 1:40875/1‑251 (MQ=255) | CTGGGCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGG‑TGACTTACTATCTTGAACAGGCACGCCAGAAATCTAAT‑G‑CCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATT‑C‑GTCCGGGAACAGA‑TGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTGCGCCGAAAAATGGC > NC_000913/941472‑941963 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |