| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,867,599 | Δ9,908 bp | yidQ–yidB | yidQ, yidR, cbrA, dgoT, dgoD, dgoA, dgoK, dgoR, yidX, yidA, yidB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3867599 | 3877506 | 9908 | 35 [0] | [0] 35 | yidQ–yidB | yidQ,yidR,cbrA,dgoT,dgoD,dgoA,dgoK,dgoR,yidX,yidA,yidB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3867598 | 0 (0.000) | 35 (0.710) | 35/490 | 0.3 | 100% | intergenic (‑176/‑130) | ibpA/yidQ | small heat shock protein IbpA/DUF1375 domain‑containing putative lipoprotein YidQ |
| ? | NC_000913 | 3877507 = | 0 (0.000) | intergenic (‑42/+198) | yidB/gyrB | DUF937 domain‑containing protein YidB/DNA gyrase subunit B | |||||
GATTCCAGTTGCTCGCCACTAACCGATTGATTGCCCTGTTGATTACTCAGCCAGGTTGAGAGAATGGCCCCTAAGCCGCCACTTTGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGG > NC_000913/3877263‑3877756 | aagtggttaaacaaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggaagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGAttt < 1:281420‑M2/7‑1 (MQ=255) gttaaacaaacggtcaaatccaataccagaacggtaaagcggggataaatcaaagttacgcataatcaatagctactgaaataagcgagaatgtaagaccttacacaatggacaggccaggcagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttctggtctattgcatagTAGATTTGCggg > 1:326118‑M2/240‑251 (MQ=255) caaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATa < 1:301187‑M2/18‑1 (MQ=255) gggcaaagccaatagcagaacggtaaagtggggataaatcaaagttacgcaaaatcaatagctcctgaaagcagcgagaatgtcagacctgccacaatggacaggtcaggtagccagaactcccatcaggcgcgtcctcatcggctacgatgtaaaaattggtctggaaatgaacttttcaagccttatcagcggacgttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATATTTGc < 2:268423‑M2/23‑1 (MQ=255) ggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAggg > 1:86916‑M2/208‑251 (MQ=255) gggataaatccaagttacgcctaatcaatagctactgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggacatgaacttttcaagccttctcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgatg > 2:97645‑M2/199‑250 (MQ=255) aaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTcc > 1:117787‑M2/194‑251 (MQ=255) acgcataatcaatagctcctgaaatcagcgagaatgtaagcccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCt < 2:172191‑M2/68‑1 (MQ=255) atcaatagctcctgaaatcagcgagaatgtaagacctgccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaatccttatcagcggactttttttttcagtttatgttctattgcatagTAGATTTGCGTGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGctt < 1:119611‑M2/76‑1 (MQ=255) caatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGcttct > 2:390858‑M2/174‑251 (MQ=255) ctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCgg > 2:124192‑M2/168‑251 (MQ=255) aaatcagcgagaatgtaagacattccacaatggacaggtcaggtagccagaacacccatcaggcgcgccctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGCTTTGCGGGTTGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGCTGATCTCCGCCCTTTTCTTATAgcttcttgcccgttgagg > 2:299961‑M2/162‑243 (MQ=255) gtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTAt > 2:190762‑M2/148‑251 (MQ=255) aagaccctccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATc < 1:208932‑M2/105‑1 (MQ=255) accttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGc < 1:220548‑M2/109‑1 (MQ=255) acaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATg > 1:147731‑M2/129‑250 (MQ=255) agccagaacacccatccggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATCAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGTGGCGTGAACGCCTTATCCGGCCTCCAAAATCATGAAACTACAATAc > 2:6813‑M2/118‑251 (MQ=255) atcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtttt < 1:190762‑M2/147‑1 (MQ=255) caggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtctatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTc < 2:422010‑M2/148‑1 (MQ=255) gcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCGTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGc < 1:171429‑M2/154‑1 (MQ=255) acgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCTATACATTGCAAGATTTTTGTCAGCCTGATAAGCGCagcc > 2:309114‑M2/83‑250 (MQ=255) gatgtaaaaatgggtctggaaatgaacttttccagccttatcagcggcctttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGAGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCCTACCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTATGCCTGATAAGCGTAgcgc > 1:387501‑M2/81‑250 (MQ=255) aaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACCCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAgg > 2:83136‑M2/76‑251 (MQ=255) atgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACg < 1:83136‑M2/180‑1 (MQ=255) tgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGc > 2:289446‑M2/71‑251 (MQ=255) gggtctggaaatgaacttttcaagccttatcagcggcctttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCt > 1:349372‑M2/70‑251 (MQ=255) aacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcg > 1:174842‑M2/57‑251 (MQ=255) atcagcggactgtttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGat < 2:117787‑M2/210‑1 (MQ=255) agcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCCGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCCTGGTTAGCGCCATTAAATATCGATAtt > 2:131999‑M2/39‑251 (MQ=255) ttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCttt < 1:168667‑M2/222‑1 (MQ=255) gtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGtt < 2:277606‑M2/231‑1 (MQ=255) tttatggtctattgcatagTAGATTTGCGGGATGCTAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGCAAATTCAATACATTGCAAGATTTTCGTAAGCCTGCTAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCTCCGCTTTCAGCGCGTtc > 2:131213‑M2/20‑251 (MQ=255) ggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTc < 1:124192‑M2/237‑1 (MQ=255) ggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATAATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGAGGAGGGCATCAGGAAAGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTc > 2:303703‑M2/15‑251 (MQ=255) gTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCATAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACgg > 1:194419‑M2/2‑251 (MQ=255) | GATTCCAGTTGCTCGCCACTAACCGATTGATTGCCCTGTTGATTACTCAGCCAGGTTGAGAGAATGGCCCCTAAGCCGCCACTTTGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGG > NC_000913/3877263‑3877756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |