| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,235,905 | 16376 bp→AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC | yjbE–malM | yjbE, yjbF, yjbG, yjbH, yjbT, psiE, xylE, malH, malG, malF, malE, malK, lamB, malM | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4235905 | 4252280 | 16376 | 38 [0] | [0] 36 | yjbE–malM | yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE,malH,malG,malF,malE,malK,lamB,malM |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4235904 | 0 (0.000) | 32 (0.820) +AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC |
28/386 | 0.3 | 100% | intergenic (+497/‑2) | pgi/yjbE | glucose‑6‑phosphate isomerase/uncharacterized protein YjbE |
| ? | NC_000913 | 4252281 = | 0 (0.000) | intergenic (+1807/‑225) | malM/ubiC | maltose regulon periplasmic protein/chorismate lyase | |||||
AGATTAATTGCTTTTGTTTTTATTTTAAGTTTATG‑ATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAAT > NC_000913/4235695‑4236149 | aGATTAATTGCTTTTGTTTTTATTTTAAGTTTATG‑ATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccg > 1:238195‑M1/1‑210 (MQ=255) aTTGCTTTTGTTTTTATTTTAAGTTTATG‑ATTTTTATGGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcg > 1:98142‑M1/1‑204 (MQ=255) tGTTTTTATTTTAAGTTTATG‑ATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcta > 1:19540‑M1/1‑196 (MQ=255) tttttATTTTAAGTTTATGAAATATTATT‑CTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagt > 1:345313‑M1/1‑194 (MQ=255) tttaAGTTTATG‑ATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaagga > 2:253798‑M1/1‑187 (MQ=255) aGTTTATG‑ATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGt < 2:414664/183‑1 (MQ=255) aGTTTATG‑ATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGt > 1:414664/1‑183 (MQ=255) aGTTTATG‑ATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaac > 2:239202‑M1/1‑183 (MQ=255) tATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacat < 1:6420‑M1/233‑70 (MQ=255) tATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacat > 2:6420‑M1/1‑164 (MQ=255) aaaTATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaa < 2:405642‑M1/161‑3 (MQ=255) aaaTATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaa > 1:405642‑M1/1‑159 (MQ=255) tataAGTTGAAACTTATATTTGATCTTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtg > 1:83026‑M1/1‑156 (MQ=255) tataAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtg > 1:125091‑M1/1‑156 (MQ=255) taAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgat > 1:355828‑M1/1‑154 (MQ=255) cTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacgg > 1:170434‑M1/1‑144 (MQ=255) attcCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcac > 2:276447‑M1/1‑128 (MQ=255) aaTTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggc > 1:8943‑M1/1‑123 (MQ=255) aaaaCGCCATTGCTAATACCCCGCGCCGTAATTCGCATGCTTAAGTTGTGTATGCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaaggaaaggaaaacatcaacgttcgcaaaagaaaatgtcgattttctgccgctaagtaaaggaaaacatcccctttcccggcatcctggacggtgattcccctacgttttccctcgccagccccggcatctgtaaag < 2:318597‑M1/251‑138 (MQ=255) aaaCGCCATCGCTCATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgcccccgccagcacgggcatcggtaaagc > 1:178266‑M1/1‑113 (MQ=255) cGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCCTTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaatgcgt > 1:88161‑M1/1‑110 (MQ=255) aTCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggt > 2:107372‑M1/1‑106 (MQ=255) aaTTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaac < 1:239202‑M1/250‑151 (MQ=255) tGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgatt > 2:161789‑M1/1‑77 (MQ=255) tgtgTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgcccgcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtt < 1:147305‑M1/250‑183 (MQ=255) gATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtat > 1:3831‑M1/1‑57 (MQ=255) ccgcccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtatt > 1:371882‑M1/1‑53 (MQ=255) gAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcact > 2:316942‑M1/1‑47 (MQ=255) aaaTGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcactt > 2:171376‑M1/1‑46 (MQ=255) aaaTGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcactt > 2:179669‑M1/1‑46 (MQ=255) gTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaattt < 1:247019‑M1/251‑210 (MQ=255) gggTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgcttt < 2:19597‑M1/250‑215 (MQ=255) gggTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgcttt < 1:269481‑M1/250‑215 (MQ=255) cctttcattcaatgAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgt > 1:67450‑M1/4‑26 (MQ=255) attcaATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacac > 1:246693‑M1/1‑20 (MQ=255) aaTGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgagttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacactttt < 1:179509‑M1/251‑236 (MQ=255) aTGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttc < 1:253798‑M1/251‑237 (MQ=255) aaTTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgctttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttattttgctttacatctcccgtaaacacttttctgcgatacc > 1:425121‑M1/1‑6 (MQ=255) | AGATTAATTGCTTTTGTTTTTATTTTAAGTTTATG‑ATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAAT > NC_000913/4235695‑4236149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |