| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 519,143 | Δ14,682 bp | [ybbO]–[allZ] | [ybbO], [tesA], ybbA, ybbP, rhsD, ybbC, ylbG, selU, allS, allA, [allR], [allZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 519143 | 533824 | 14682 | 29 [0] | [0] 29 | [ybbO]–[allZ] | [ybbO],[tesA],ybbA,ybbP,rhsD,ybbC,ylbG,selU,allS,allA,[allR],[allZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 519142 | 0 (0.000) | 29 (0.590) | 28/486 | 0.6 | 100% | coding (8/810 nt) coding (624/627 nt) |
ybbO tesA |
NADP(+)‑dependent aldehyde reductase YbbO multifunctional acyl‑CoA thioesterase I and protease I and lysophospholipase L1 |
| ? | NC_000913 | 533825 = | 0 (0.000) | coding (815/816 nt) noncoding (197/235 nt) |
allR allZ |
DNA‑binding transcriptional repressor AllR small RNA AllZ |
|||||
ATCGGTCAGGGCGATCACCTCGTCGGCTGCGCGATCAACACTTTCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATGAGTCATGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGCAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAA > NC_000913/518895‑519381 | aTCGGGCAGGGCGATCACCTCGTCGTCTGCGCGATCAACCCTTTCTGGTTAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaat < 1:366573‑M1/251‑4 (MQ=255) gtaggGCTATCACCTCGTCGCCTGCGCGATCACCCCTTGCTGGTTAATCCAGATCGATCACCACGCCGGTAAACCCCATGCTGTTCATGCGCTCAACAGCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCTGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtct < 2:422430‑M1/248‑8 (MQ=255) ccgtcggCTGCGCGATCAACACTTTCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctct < 2:181563‑M1/250‑23 (MQ=255) cgtcgGCTGCGCGATCAACACTTTCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCGCCGTTGCTTTATaatgtctgtcgcatcccgctctg < 2:108485‑M1/251‑24 (MQ=255) gcgcGATCAACACTTTCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgg > 1:300812‑M1/1‑220 (MQ=255) aTCACCACTTTCTGGAGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATCACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctatgcggagcgggtttt > 2:323449‑M1/1‑215 (MQ=255) tCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaa < 1:93495‑M1/250‑46 (MQ=255) cAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattt > 1:124914‑M1/1‑185 (MQ=255) cAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaatt < 1:154055‑M1/250‑66 (MQ=255) gCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaat < 1:270486‑M1/251‑73 (MQ=255) cGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataa < 2:300812‑M1/251‑75 (MQ=255) aaTCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaat > 1:177695‑M1/1‑172 (MQ=255) cATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaat > 2:207726‑M1/1‑158 (MQ=255) cgcTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggca < 1:205113‑M1/251‑98 (MQ=255) cgcTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggc > 2:50819‑M1/1‑154 (MQ=255) aCATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGCTTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggcgcgggtttttttgacaacatttgaaagttggaaaaattttccaatacttagaggtaggaataaaatggcaaacatg > 2:405736‑M1/1‑148 (MQ=255) ccGGTTTCCGGCAACATGCCAGCACATGCACACCCTGGCGTTTTAATTCGAGAGCGCTTTCCAGGCCACTCACACTGGACCATCAGGTCATTAAGACCGGTTTTTGCATAACTTTACCTGTCAGGACCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaatttggaaaaattttccaataaaaagaggtaggaataaactggcaaaaataagagccg > 2:382466‑M1/1‑141 (MQ=255) cGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcg < 1:90431‑M1/251‑119 (MQ=255) cGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcg > 1:256279‑M1/1‑133 (MQ=255) aaaCCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcc < 2:157877‑M1/128‑17 (MQ=255) aaaCCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcc > 1:157877‑M1/1‑112 (MQ=255) aaaCCCTGGCGTTTTAATTCGAGCGCGCTCCCCAGGCAAATTCCACTGGAACATCCGGTAATTAACACCGATTTTTGCATAACTTTACCTGTCAGGATATCCGTTGATTTATaatgtctgtcgcatcccgcgctgcggagcgggtttttttcacaaaatttgaaagttggaaaaattttccaataaacagaggtaggaataaaacggcaaaaatgagctccgttgacgcgcccatgtatgtgctggagga > 2:434031‑M1/1‑112 (MQ=255) aaCCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACTGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggatcgggtttttttgacaaaatttgaaagttggaaaaatttgccaataaatagaggtaggaataaaatggcaaaaatgagagcagttgactcggcaatgtatgtgctggagaaag < 2:356609‑M1/251‑141 (MQ=255) aaCCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATACGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagtcggaaaaattttccaataaatagaggtaggaataaaatggcaacagtgagagccgttgacgcggcaatgtctgtgctggagaa > 2:294774‑M1/1‑111 (MQ=255) ggCGGTTTAATTCGAGCGCGCTTGTCAGGCCACTTCCTCTGGAAAAGCCGGTAATTAAGACCGATTTTTGCATAACTTTGCCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctacggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaagg < 2:253338‑M1/249‑145 (MQ=255) ccGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgctgagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgcaatcaagccgttcta < 1:249212‑M1/250‑193 (MQ=255) gTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgcaatcaatccgttctactca < 1:231772‑M1/251‑197 (MQ=255) gATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagcaggtatcactaccgccttcggtgttccgggagctgcaatcaatccgttctactaagcgatgcgtaagcacggcggtattcgtcccattctggc > 1:335309‑M1/1‑17 (MQ=255) ccGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtgtttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatgtcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgtgagctgcaatcaatccgttctactcagcgatgcgtaagcacggcggtattcgtcacagtctgtcgcgtc < 2:9972‑M1/251‑240 (MQ=255) | ATCGGTCAGGGCGATCACCTCGTCGGCTGCGCGATCAACACTTTCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATGAGTCATGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGCAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAA > NC_000913/518895‑519381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |