| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 651,317 | 0 | G | T | 24.6% | 90.4 / 11.6 | 57 | V180V (GTC→GTA) | citC | citrate lyase synthetase |
| Reads supporting (aligned to +/- strand): ref base G (9/34); new base T (14/0); total (23/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.06e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACAGCGCCTCGTATTCGGTTTTGG > NC_000913/651070‑651567 | gTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAAGGGTTAATGACGCTCGGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGAGGATGTATTCGGAGCCTCGAGGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCTTGA‑AGAATCTTCTTTGACt < 2:524441/251‑1 (MQ=255) aaaGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGGCC‑TTTTAA‑A‑CC‑AAATCCACCCGGGCTTCCTAAGGGAAGCGGGG‑AGAATATTCTTTTGCTaaaaaacaaagg > 2:266031/1‑243 (MQ=255) aGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAAGGGTTAATGACTCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTAGTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATATGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑c < 2:200137/251‑1 (MQ=255) ggTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑AAAACCCGCCGGGCTTTCTAGGGGGAGCGGGA‑AGAAACTTCTTTTATTAAAAAAAGAT‑G‑C‑aaaca > 1:195727/1‑247 (MQ=255) aGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CCCAAACCCA‑CCCGTCTTCATAGGGGGAGCGTGA‑AGAATCTTTTTTTACTAAAAACAGAA‑G‑C‑AA‑CCAGTCGC‑Acctgtccgc > 1:250146/1‑243 (MQ=255) cgcgGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGG‑GC‑TTTTTACA‑CC‑AAAACCAGACGGGCTTTATAGTGGTAGCGGGT‑AGCATCTTCTTTTGCTAAAAAAAAAT‑G‑c‑ca‑ccacaccgactgggccggac > 2:308483/1‑234 (MQ=255) gcgGGAGCGAGGTACTGACGGCAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGG‑CC‑TTTTATAA‑CC‑AAAACCAGCCGGGCTTCATAGGGGGAGAGGGG‑AGAATATTCTTTTACTCAAAACAGAA‑G‑C‑AA‑CCAACCGC‑CCTGTGTCGCaac > 2:280051/1‑249 (MQ=255) ggAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTg < 2:114761/251‑1 (MQ=255) gCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAAGGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGTAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTg < 1:78551/251‑1 (MQ=255) gACGGAAAATCTTCAGATCAATTTCGGTTTAACAATGTGTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATTTATTCGGAGCCACGATGCACAGGCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACT‑CC‑AAATCCAGCCGGTCGTCATATGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGGCTC‑ACGTTGCCGCAGCCGGGTGAATCAGATa < 2:521839/250‑1 (MQ=255) gACGGAAAATCTTCAGATCAATTGCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGTAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGAt < 2:472504/249‑1 (MQ=255) gAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACtgt < 1:452830/223‑1 (MQ=255) gAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGAGGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGt < 2:469562/251‑1 (MQ=255) aaaaTCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTGAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTGCGTTGACGAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCACATAACGGTg < 2:429853/251‑1 (MQ=255) tCAGATCAATTTCGGTGTAACAAGGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAAGCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATATCGGTGACCAtt < 2:52628/250‑1 (MQ=255) aGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGACCGTAGCGCGGGCGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑GC‑TTTTAACA‑CC‑AAATCCCACCGGTCTTCATAGGGGAAGCGTGG‑AGAATCTTCTTTTCCTAAAAAAAGAA‑G‑CCAA‑CC‑GTCGCCAC‑GTGCCCCCGCCCGTTGAATCCGCTAACGGTGACCCTTcct > 1:506867/1‑249 (MQ=255) ttCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑CTTTAACA‑CC‑AAAACCAACCGGGCTTCATAGGGGGAGCGTGA‑AGAAACTTCTTTGTCTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑CCTGTGCCGCAGCCTGTTGAATCAGATAACGGGGACCATTCGTAAAGGGA‑t > 1:404426/1‑251 (MQ=255) ggTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑CTTTAACA‑CC‑AAAACCAGCCGGTCTTCACAGGGGAAGCGTGA‑AGAATCTTCTTTTGCTAAAAACAGAT‑G‑C‑AA‑AAAGACGC‑ACTGTGCCGCCGCCTGTTTAATCAGATAACGGGGACCATTCGTAAAgggggttg > 1:213845/1‑246 (MQ=255) gtAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCg < 1:305106/250‑1 (MQ=255) aaCAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTCTTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CCCTTTTAA‑A‑CC‑CAATCCCGCCCGTCTTCATTGGGGGAGCGTGA‑AGAATCTTCTTTTACTTAAAACAGAT‑G‑C‑CA‑ACAGTCGC‑CCTGTGGCGCCGCCTGTTGAATCAGATAAAGGGGAACCTTCGTAAAgggg‑ttggggttt > 1:241385/1‑250 (MQ=255) aCAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTtca < 1:280051/251‑1 (MQ=255) cAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTtcat < 1:209592/251‑1 (MQ=255) aTGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CT‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGc < 2:432865/243‑1 (MQ=255) aTGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTAAA‑AC‑AAATCCCGCCCGGCTTCATAAGGGGAGCGGGA‑AGAAACTTCTTTGACTTAAAACAGAT‑GAC‑AA‑C‑AGGCGC‑ACTGTGCCGCCGCCTGTTGAATCAGATAACGGTGAACACTTGTAAAGGGA‑TTGGCggtcctcc > 1:349697/1‑244 (MQ=255) aTGGTTAATGACGCTATGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CT‑TTTTTACA‑CC‑AAAACCAGCCGGGCTTCATAAGGGGAGAGTGA‑AGAATCTTCTTTTTCTTAAAACAAAT‑G‑C‑AA‑CCAGTCGC‑ACTGGGCCGCCGCCTGTTGAATAAGATAAAGGGGACCAATTGTAAAAGGA‑GTGGCggatcggg > 1:432865/1‑244 (MQ=255) ggTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATcac < 1:250659/250‑1 (MQ=255) gTTAATGCCGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑TC‑CTTTAACA‑CC‑CACACCCGCCGGTCTTCCTAGGGGGAGCG‑GATAGAATCTTCTTTGACTTAAAACAAATTG‑C‑A‑‑CCAATCGC‑AATGTGGCGCCTCCTTGTGTATCAGCTAACGGCGACCATTCGTCAAGGGG‑TTGGGGTtcatacac > 2:3743/1‑246 (MQ=255) aCGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGcc < 1:278564/251‑1 (MQ=255) aCGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGAGCGGGAGATGATGTATTCGGAGCAACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑AAAAACAGCCGGTCTTCATACGGGGAGCGTGA‑AGAAACTTCTTTTACTAAAAACAAAA‑G‑C‑AA‑CCAGTCGC‑ACTTTGGCCCCGCCTGTTTAATTCGATAACCGGGACCATTCGTAAAGGGG‑TAGGCGTTCCTTACAATgccgcc > 1:315617/1‑251 (MQ=255) tctGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑CTTTTACA‑AC‑AAATTCAGCCGGGCTTCATTGGGGGGGCGTGG‑AGAATTTTTTTTTGCTTAAAAAAGAT‑G‑G‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAAATAACGGTGACCCTTCGTAAAGGGG‑ATGGGGGTCATCACAATGCAGGCAATc > 1:258284/1‑251 (MQ=255) aaTGAAGTGGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCt < 2:258284/250‑1 (MQ=255) aGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGAG‑CC‑TTTTAAAA‑AC‑AAATCCCGCCGGGCTTTATAGGGGGAGCGTGA‑AGAATATTTTTTGACCAAAAAAAAAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCCGCCCGTTGAATCAAATAACAGGGACCATTCGTAAAGGGA‑TTGGGGGTCATCACAATGCAGCCAAAATTGTTCCCTGGGTGACGAAAtt > 1:195133/1‑251 (MQ=255) gTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACCGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACAACC‑AAA‑CCCGCCGGGCTTTATAGGGGGAGCGTGA‑AGAATCTTCTTTGACTAAAAAAAAAT‑G‑C‑AA‑CCAGGCGC‑ACTGTGCCCCAGCCTGTTGAATCAGATAAAGGGGACCATTCGTAAAAGGG‑TTGGCGTTTATCACCATTCAGCCCATCTTTTTCCCTGGATGACGAAATTTTTTc > 1:468270/1‑249 (MQ=255) gcgGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑GTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGAtt < 2:418583/251‑1 (MQ=255) cgGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGCGGAATATCGGCGGTG‑CC‑TTTTAAAA‑CC‑AAATTCAGCCGGTCATCATAAGGGAAGCGTGA‑AGAAACTTTTTTGCCTAAAAACAGAT‑G‑C‑AA‑ACAGTCGC‑ACTGTGGCGCACCCTGTTGAATCAAGTAACGGTGACCATTCGTAAAAGGA‑TTGGGGGTTATTACAATGCAACCCAACTTGTTCCCTGGGTGACGGAAtttttttcacgattc > 1:355620/1‑242 (MQ=255) agaTGCTGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTT‑GC‑TTTTTACA‑AC‑AAATCCACCCGGGCTTCATAAGGGGAGCGGGG‑AGAATCTTCTTTTACTAAAAAAAGAT‑G‑C‑AA‑ACCGTCGC‑CCTGTGCCGCCGCCTGTTTGATCAGAAAACGGTGACCATTCCTAAAAGGG‑TGGGGGTTCATTACAAAGCAGCCAATCTTGTTTCCTGGATGACGAAACTTTTTCTGCgctttcgcc > 2:311199/1‑243 (MQ=255) gatgTATTCGGAGACACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGc < 2:405328/251‑1 (MQ=255) ggAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAAAA‑AC‑AAATCCAGCCGGGCCTCATAGGGGAAGCGTGA‑AGAATCTTCTTTTACTAAAAACAGAT‑G‑C‑AAACCA‑TCGC‑CCTGTGCCGCCGCCCGTTGAATAAAATAACGGGGACCCTTCGTAAAGGGA‑TTGGCGGTCATCACAATGCCGCCCATCCTGTTCCCTGGATGACGAAATTTTTTTAGCGATTCGGCATAGCGGTTCAGTc > 1:352175/1‑251 (MQ=255) ggCACAGTCAGGCGTGGAATAGCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCGTGAGGACGAAAGGTTTGCAGCGAGTCGGCATAGCTTTTCAGTCGCGTGGCGCt < 2:241385/250‑1 (MQ=255) cacaGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGt < 2:195727/251‑1 (MQ=255) acaGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑CAATACCGCCGGGCTTTATAGGGGGAGCGGGA‑AGAAACTTCTTTTCCTAAAAACAGAA‑G‑C‑AAACCA‑TCGC‑CCTGTGCCGCCGCCTGTTTAATCAGATAACGGGGGCCATTCCTAAAGGGAGTTGG‑GGTCCTCACCATGCAGCCAATCTTGTTTCCTGGCTGACGAACTTTTTTCTGCGCTTCGGCATAGCGTTTTAGTCGCGTGGGGCTGtt > 1:518750/1‑251 (MQ=255) gTCAGGCGTGGAAGATCGGCGGTG‑AC‑TTTTAACA‑CC‑AAACCCAGCCGGTCTTCATAGGGGAATCGTGA‑AGAATCTTCTTTGACTAAAAACAGAG‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCAGTCGTAAAGGGA‑TTGGCGTTCATCGCAATGCAGCCAATCTTGTGCCCTGGAGTACGAAATTTTTTCATCGATGCGGCATAGCTTTTCAGTCGCGTTGCGCTGTTTTc < 2:60634/251‑1 (MQ=255) cAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGTATGACTAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCa < 2:355620/251‑1 (MQ=255) cAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCa < 1:311199/251‑1 (MQ=255) cggTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCg > 1:276513/1‑251 (MQ=255) cc‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCTCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTAc < 1:238791/251‑1 (MQ=255) cc‑AAATCCAGACGGTCTGCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGCGG‑TTGGCGCTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATCGCCTTTCAGTCGCGTGGCGTTGTTCACCAGCAGCACCCTCACGCCGGGTACGATTGTCAGc < 2:349190/251‑1 (MQ=255) cacgaaaccatccGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGGCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAGTGCAGCCAATCTGGTTCCCTGGATGAAGAAATTTTTTCAGCGATCCGGCATAGCGTTTCAATCGCGTGGCGCTGTTTTCCATCAGCGCCATCACGCCGGGTACGCTGGTCAg < 2:351942/240‑1 (MQ=255) c‑AAATCCAGCCGGTCCTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCAGCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACTCCGTGTACGCTGGTCAGCg < 2:276513/251‑1 (MQ=255) aaaTCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGt < 1:402778/251‑1 (MQ=255) ccAGCCTGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGaa < 1:293478/251‑1 (MQ=255) cGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAAcc < 2:250146/251‑1 (MQ=255) agaaTCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTGCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGGGGAAAAACCGCACTGGCGGAACAGCGCCTCGt < 2:195133/251‑1 (MQ=255) aaTCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACAGCGCCTCGTAt > 2:7979/1‑251 (MQ=255) tcttTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACAGCGCCTCGTATTc < 1:148495/248‑1 (MQ=255) ttGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACAGCGCCTCGTATTCGGtttt > 1:97195/1‑251 (MQ=255) gtGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACAGCGCCTCGTATTCGGtt < 2:213845/248‑1 (MQ=255) gACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGAAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCCCGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACAGCGCCTCGTATTCGGTTTTgg > 1:330406/1‑251 (MQ=255) | GTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCATAGGGGAAGCGTGA‑AGAATCTTCTTTGACTAAAAACAGAT‑G‑C‑AA‑CCAGTCGC‑ACTGTGCCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAAGGGA‑TTGGCGTTCATCACAATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACAGCGCCTCGTATTCGGTTTTGG > NC_000913/651070‑651567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |