Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,176,1150GA22.4% 134.4 / 16.2 77A58T (GCT→ACT) tufBtranslation elongation factor Tu 2
Reads supporting (aligned to +/- strand):  ref base G (18/41);  new base A (17/0);  total (36/41)
Fisher's exact test for biased strand distribution p-value = 1.19e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TTCAACAAGTCGGGCATGTTGCCTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACAAATGCGACAT  >  NC_000913/4175870‑4176362
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                          
ttCAACAAGTCGGGCATGTTGCCTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGACAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGGGCTGCCCGCGCACTCGACCAGCAAGCTAAAGCGCCGGGAGAAAAAGCTCgg                                                                                                                                                                                                                                                       >  2:91811/1‑250 (MQ=255)
      aaGTCGGGCATGTTGCCTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACCCGCCGGAAGAAAAAACTCgcgggatt                                                                                                                                                                                                                                                 >  1:102228/1‑244 (MQ=255)
      aaGTCGGGCATGTTGCCGGGTTGAGGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGGTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATc                                                                                                                                                                                                                                                 <  2:507502/251‑1 (MQ=255)
         tCGGGCATGTTGCCTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCCCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTgggataacc                                                                                                                                                                                                                                              >  1:435369/1‑244 (MQ=255)
             gCATGTTGCCTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCa                                                                                                                                                                                                                                         <  2:402838/251‑1 (MQ=255)
                 ggtGCCTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAacac                                                                                                                                                                                                                                     <  2:7496/249‑1 (MQ=255)
                 gTTGCCTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCCCGCATTCGCCCAGATCGATAAAGCGCCCGAAGAAAAAACCCGTGGTATCCCCATCCacac                                                                                                                                                                                                                                     >  2:79388/1‑251 (MQ=21)
                    gCCTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGGGCTGCTCGGGCATTCGACCCGATCGATAAAGCCCCGGAAGGAAAAACTCGTGGTATTCCCCTCAacacatc                                                                                                                                                                                                                                  >  2:167973/1‑248 (MQ=255)
                     ccTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGCGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCCCCCGCCTTCGACCACATCGATAAAGCGCCGGAAGAAAAAACTCGTGGTATTACCATCCACACTtcc                                                                                                                                                                                                                                 >  2:354814/1‑250 (MQ=18)
                       tGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGCGGGACAATCGATGTCTAAAGAAACGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGAGCTTCTCGCGCCTTCGGCCCGATCGATAACGCGCCCGGAGAAAAAACTCGTGGTATCACCCTCAACCCTtctcc                                                                                                                                                                                                                               >  1:449063/1‑250 (MQ=255)
                         gTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCCTTCGCCCAGATCGGTAAAGCGCCGGCAGAAAAAGCTCGTGGTATCAACATCAACACTTCTCACg                                                                                                                                                                                                                             >  1:172639/1‑251 (MQ=255)
                         gTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCCCATTCGACCAGATCGATAAACCGCCGGGAGAAAAAGCTCGTGGTATCACCATCAACACCTCTCACg                                                                                                                                                                                                                             >  1:394093/1‑251 (MQ=255)
                               gtggtgATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAAt                                                                                                                                                                                                                       <  1:519412/251‑1 (MQ=255)
                                                        gtCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCCCGCCATCGGCCAGATCGATAACCCGCCCGAACAAAAAACTCCCGGTATCCACCTCCACACTTCTCACGTTTGATACGACACCCCCACCCgcccctcccc                                                                                                                                                                                              >  2:151152/1‑242 (MQ=17)
                                                            tagaggtgcaagcggtGTCTAAAGAAAAGTTTGAACGTACAAATCCGCACGTTAACGTCGGTACGATCGGCCACGTTGACCATGGGAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACTCGCCAGAATGAAATGCTCGGTGTATCATCCTCAACACTTCTCACGTTGACTACGACACCCCGACCCGTCTCTACGca                                                                                                                                                                                             <  2:524219/233‑1 (MQ=14)
                                                             agagGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTTCTCGCGCCTTCGACCAGAACGATAACGCGCCGGAAGAAAAAACTCGTGGTATCACCCTCAACACTTCTCCCGTTGAATACGAAACCCCCACCCGTCACTCCGCacacc                                                                                                                                                                                         >  1:293058/1‑250 (MQ=17)
                                                                   aCAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAACTCGTGGGATCACCATCAACCCTTCTCCCGTTGAATACGAAACCCCCACCCCTCACTACCCACACCTAGACt                                                                                                                                                                                  >  1:58770/1‑251 (MQ=14)
                                                                    cAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAACTCGTGGGATCACCATCAACACTTCCCACGTTTAATACGACACCCCGACCCGTCACTACGCACACGTAGACTg                                                                                                                                                                                 >  1:182105/1‑251 (MQ=255)
                                                                    cAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGGGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGGAGAAAAAACTCGTGGGATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTg                                                                                                                                                                                 >  1:404664/1‑251 (MQ=255)
                                                                        cGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCCCGCGCCTTCGACCAGATCGATAACGCGCCGGGAGAAAAAACTCGTGGGATACCCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACCTGccc                                                                                                                                                                              >  1:516539/1‑251 (MQ=14)
                                                                          aTGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCCTTCGACCCAATCGATGAACCCCCGGAAGAAAAAAATCGTGGGATCACCCTCAACACTTCTCCCGCTGTATACGACAACCCGACCCCGCACCACGCCCACGTAGAACGCCCggg                                                                                                                                                                          >  2:382725/1‑251 (MQ=14)
                                                                                aaaGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATGCGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCAc                                                                                                                                                                      <  1:500698/249‑1 (MQ=255)
                                                                                   gAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAACCAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGGGCTGCTCGCGCATTTGGCCCGAACGGTAAACCCCCCGGAGACAAAACTCGTGGGGTCACCCTCAACCCTTCTCCCGCTGGATACGGCCCCCCCACCCGCCCCTACGcacccctataccaccccgggggcgccgc                                                                                                                                                                   >  2:131889/1‑226 (MQ=255)
                                                                                       aGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTAt                                                                                                                                                             <  1:111163/251‑1 (MQ=255)
                                                                                          ttGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCAATCGACCAGCTCGATAACCCGCCGGGAGAAAAAACCCGGGGTATCCCCACCAACACATCTCACGTTGAATTCGACACCCCGACCCGTCCCTAAGCCCACCTAGACTGCCCCGGGCACGCCCACCATGtt                                                                                                                                                          >  1:61860/1‑251 (MQ=14)
                                                                                                             cGTTAACGTCGGTACTATCGGCCACTTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATTTTAAAAACATGATCACCGGtg                                                                                                                                       <  2:512436/251‑1 (MQ=255)
                                                                                                             cGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGtg                                                                                                                                       <  2:143281/251‑1 (MQ=40)
                                                                                                              gTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGtgc                                                                                                                                      <  1:86743/251‑1 (MQ=40)
                                                                                                                  aCGTCGGTACTAACGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCTCCGGTGCTgcg                                                                                                                                  <  2:58770/251‑1 (MQ=255)
                                                                                                                      cGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCCTTCGACCAGATCGATAACGCGCCGGAAGAAAAAACTCGTGGTATCACCATCAACCCTTCTCACGTTGGATACGACACCCCGCCCCCTCCCCACGCACACGTAGACCGCCCCGGGCACACCGCCTCTGTTAAAAACACGATCCCCGGGGCTGCGCAgg                                                                                                                              >  2:68412/1‑250 (MQ=14)
                                                                                                                             aTCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGAc                                                                                                                         <  2:435369/249‑1 (MQ=40)
                                                                                                                               cGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGgc                                                                                                                      <  1:91811/250‑1 (MQ=40)
                                                                                                                               cGGCCACGTTGACCAGGGTAAAACAACGCGGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGAACAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGgc                                                                                                                      <  2:427215/250‑1 (MQ=255)
                                                                                                                                  ccACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGa                                                                                                                  <  1:79388/251‑1 (MQ=40)
                                                                                                                                      gTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCt                                                                                                              <  2:3538/251‑1 (MQ=40)
                                                                                                                                        tGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGAACGCTAACGCGCCGGAAGAAAAAGCTCGTGGTATAACCCTCAAAACATCTCACGTTGAATAAGAAACCCCGACCCGTCCCTACGCACCCGTGGACAGCCCGGGGGACCCCGGCCATGTTAAAAACATGACCAACGGGGGTGCGCAGCTGGGCGGCGCGATcccgg                                                                                                            >  2:2640/1‑248 (MQ=14)
                                                                                                                                         gACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTgg                                                                                                            <  1:101420/250‑1 (MQ=40)
                                                                                                                                            cATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCCGATAGATAACGCGCCGGAAGAAAAAACTCGTGGTATCACCATCAACACTTCTCCCGTTTAATACGACACCCCCACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGCCTATGTTAAAAACATGATCACCGGGGCTGCGCAGATGGACGGCGCGATCCTGGTAGt                                                                                                        >  1:350950/1‑251 (MQ=14)
                                                                                                                                             aTGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGtt                                                                                                       <  2:102228/251‑1 (MQ=39)
                                                                                                                                                    aacaacGCTGACCGCTGAAATCACTACCGTACCGGCTAAAACCTACGGCGGTGCTGCTCGCGCATGCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTAGCACCATCGACACTGCTCACGTGGAATACGACGCCCCGACCCGTCGCTACGCACACGTAGACTGCCCGGGGCAAGCCGACTATGTTAAAAACATGATCACCGGGGCTGCGCATATAGACGGCGCGACCCTTGTAGTTTCTGCGa                                                                                                <  2:356335/251‑1 (MQ=11)
                                                                                                                                                     acaacGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGAc                                                                                               <  2:147131/251‑1 (MQ=38)
                                                                                                                                                     acaacGCTGACCCCCGCAATCACTACCGGACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGACGGAAGAAAAAGCTCGTGGTAACACCATCAACCCGTCTCACCTTGAATACGACACCCCGGTCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATTTTAAAAACATGATCTCCGGTGCTGCTCAGATCGACGGGGCGATCCTGGTAGTTGCTGCGAc                                                                                               <  2:92591/251‑1 (MQ=11)
                                                                                                                                                       aacGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCCGAACGATAAAACGCCCGAAGAAAAAACTCGTGGGATTACCCTCAACACTTTTCCCGTTGAATACGACACCCCGACCCGCCACCACGCACACGTCGACTGCCCGGGGCCCGCCGACCCTGTTAAAAACATGAACACCCGGGCTGCGCAGATTGACGGCGCGATCCTGGTAGCTGCcgcgcgtg                                                                                             >  2:9303/1‑247 (MQ=11)
                                                                                                                                                             gACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGc                                                                                        <  1:198252/250‑1 (MQ=35)
                                                                                                                                                             gACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCGCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACgg                                                                                         <  2:376817/249‑1 (MQ=25)
                                                                                                                                                                cGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCCCGCATTCGGCCAGATCGATAACGCGCCGGCAGAAAAAGCTCGTGGGATCACCCACAACACCTCTCACGTTGAATACGACACCCCGCCCCGTCACTACGCACACGTAGACCGCCCCGGGGCCGCCGACTATGTTTAAAACATGAACCCCCGGGCTGCGCCGCTGGACGGCGCGGTCCTGGTAGGTGCCGCCGCTGACGGCCCgc                                                                                    >  2:259953/1‑250 (MQ=11)
                                                                                                                                                                    gCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTTTCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGc                                                                                 <  1:524204/250‑1 (MQ=25)
                                                                                                                                                                               cGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTg                                                                     <  2:404664/251‑1 (MQ=33)
                                                                                                                                                                                  aCTGGCTAAAACCTACGGCGGTGCTGCTCGCGCAGTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCGCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCGGCGACTGACGGCCCGATGCCGCAGACTCGTGAGc                                                                  <  2:87496/251‑1 (MQ=18)
                                                                                                                                                                                     ggCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGGAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGca                                                                 <  2:93176/249‑1 (MQ=18)
                                                                                                                                                                                         aaaaCCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATcc                                                            <  1:2640/250‑1 (MQ=33)
                                                                                                                                                                                            aCCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGGTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTTCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCctgct                                                        <  2:449063/251‑1 (MQ=18)
                                                                                                                                                                                                 cggcggTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGgtc                                                   <  1:131889/251‑1 (MQ=33)
                                                                                                                                                                                                  ggcggTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTgggccg                                                  >  1:18311/1‑248 (MQ=18)
                                                                                                                                                                                                     ggTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGgtcgtc                                                >  1:188330/1‑250 (MQ=33)
                                                                                                                                                                                                           gctCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAgg                                         >  2:147082/1‑251 (MQ=33)
                                                                                                                                                                                                                cgcATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTc                                    <  2:293058/251‑1 (MQ=31)
                                                                                                                                                                                                                 gcATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTcc                                   <  1:320888/251‑1 (MQ=31)
                                                                                                                                                                                                                   aTTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGt                                 >  1:43973/1‑251 (MQ=31)
                                                                                                                                                                                                                   aTTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGt                                 <  1:225152/251‑1 (MQ=31)
                                                                                                                                                                                                                     tCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTGCCGTa                                <  1:167973/250‑1 (MQ=14)
                                                                                                                                                                                                                         ccAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTAcatc                            >  2:45005/1‑250 (MQ=31)
                                                                                                                                                                                                                             aTCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCCTCgt                       >  2:333524/1‑251 (MQ=14)
                                                                                                                                                                                                                             aTCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCgt                       <  2:182105/251‑1 (MQ=31)
                                                                                                                                                                                                                              tCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCgtg                      >  1:26575/1‑251 (MQ=31)
                                                                                                                                                                                                                                gATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGtt                    >  1:43796/1‑251 (MQ=31)
                                                                                                                                                                                                                                gATAACGCGCCGGAAGAAAAACCTCGTGGTATCACCCTCCACACTTCACCCGTTGAATACGACACACCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCAGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGACAGGGAGGCGTTCCGTACATCATCGTGtt                    >  2:266932/1‑251 (MQ=11)
                                                                                                                                                                                                                                 aTAACGCGACGGAAGAAAAAGCCCGGGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTc                   <  2:164222/251‑1 (MQ=14)
                                                                                                                                                                                                                                  gttaatgccccGGAATAAAAAGCTCGTGGTATAACCATCAACACTTCTCACGATGAATACGACACCCCGACCCGTCACTACGCACACGTAGACGGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCGGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCCCATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGtt                    <  2:302643/242‑1 (MQ=11)
                                                                                                                                                                                                                                    aaCGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACCCCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCt                 <  2:11479/251‑1 (MQ=14)
                                                                                                                                                                                                                                    aaCGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAg                                                                            >  1:523814/1‑192 (MQ=32)
                                                                                                                                                                                                                                    aaCGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTGGCTGCGACTGACGGCCCGATGCCGCAg                                                                            <  2:523814/192‑1 (MQ=17)
                                                                                                                                                                                                                                           ccGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACaa           <  1:147082/251‑1 (MQ=31)
                                                                                                                                                                                                                                              gaagaaAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACAAATg        <  1:151152/251‑1 (MQ=31)
                                                                                                                                                                                                                                                    aaaGCTCGTGGTCTCACCATCAACACTTCGCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGCCTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATACTGGTAGTTGCTGCGCCTGACGGCACGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTGGTCAGGTAGGCGGTCCGTTCCTCATCGGGTTCCTGAACAAATGCGACAt  >  2:305226/1‑251 (MQ=11)
                                                                                                                                                                                                                                                    aaaGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACAAATGCGACAt  >  2:6420/1‑251 (MQ=31)
                                                                                                                                                                                                                                                    aaaGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACAAATGCGACAt  >  1:497523/1‑251 (MQ=31)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                          
TTCAACAAGTCGGGCATGTTGCCTGGTTGATGTGGTGATATCACCGATTTATCCGTGTCTTAGAGGGACAATCGATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACAAATGCGACAT  >  NC_000913/4175870‑4176362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: