| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,895,556 | 0 | T | C | 31.0% | 107.5 / 17.2 | 73 | M352V (ATG→GTG) | adeP | adenine:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base T (36/13); new base C (1/21); total (37/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.56e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAATCAGCGTACCG > NC_000913/3895306‑3895803 | aaCAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTGCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAAGAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCAGCAGCAC‑GCCAAC‑GTAAAGCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCAt < 2:522660/251‑1 (MQ=255) agcagcGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATc‑cc < 2:281512/251‑1 (MQ=255) gcagcGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGGTCACGCGTGCCCGACTGGAAGACCTCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCCACTTCCGCCGAGCCTGGC‑ACCCTc‑ccc > 2:221444/1‑251 (MQ=255) gcagcGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAAAGCCGGAACAGATTCAGTAAAATCCTGCCCGGTCACGCGTGCCAGACTGGGAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑CCCAGCTGCCGCGTAGCCTGGC‑ACCATc‑ccc > 2:385897/1‑251 (MQ=255) gcAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGTTCCCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACTGCA‑TCATCACGGCGTTAATAAACGCCGGAACAGATTCAGTAAGGTCCGGCCAGGTCACGCGTGCCAGACTGGAAGTCGTCAGCAC‑GCCAAC‑GTAAATGAGCGC‑ACAAGCCGCAGCGTAGCCGTTC‑GCCATC‑CCCGCCAg < 2:266938/251‑1 (MQ=255) gatTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAAAGCCGGAACAGATTCCGTAAGATCCTGCCAGGTTACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCCGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCCCCCGCGGCGAc > 1:154483/1‑250 (MQ=255) gggCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAAAAGATTCAGTAAGATCCTGCCAGTTAACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑c > 1:145100/1‑251 (MQ=255) gCTTAGATCCCGCAGACGTCCGGTACCGATTTTCATCCCGCAGTAGGAGATAAAGCCCAGCGCGATCCCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGCCTGGAAGTCATCACCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑Cca < 1:209600/251‑1 (MQ=255) gCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCCAC‑GTAAATCAACGC‑ACCAGCTGCAGCGGAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑cc > 1:47581/1‑250 (MQ=255) gATCACGCAGCCGTCCGGTCCCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCGGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAgg < 1:385897/251‑1 (MQ=255) cAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTACTAAACGCCGGAACAGAGTCAGAAAGAACCTGCCAGTTAACGCGTGCCAGCCTGGGAGTCGTCATCAC‑CCCCAC‑GAAAAACAACGC‑CCCCGCCGCCGCGTAGCACGGC‑CCCATC‑CCCCCCCGCCGCGACAGAAAgcaaaacaacagggcccacc > 2:39607/1‑232 (MQ=255) aCCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGAAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAAAAAACGCCGGAACAGATTCATCAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGGGTACCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAAcc < 1:161068/250‑1 (MQ=255) aTTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGc > 1:391453/1‑251 (MQ=255) tcatcaCGAAGTAGGAAATAAGGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑CCGGCA‑TCATCACGGCGGTAATAACCGCCGGAACAGATTCAGAAAGACCCTGCCAGTTCACGCGTGCCAGCCTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑CCCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGt < 1:8189/250‑1 (MQ=255) catcaCGCAGTAGGAGATAAAGCCAAGCGCGATCCCTTCGTTAATCGAAAACCTGA‑AGGGCA‑TAATCACGGCGGTAATAAACCCCGAAACAGATTCAGTAAGACCCTGCCAGTTCCCGCGTGCCGGCCTGGAAGTCATCAGCCC‑GCCATC‑GTAAATCAGCGC‑ACCAGCTGAGGCGGTGCGTGGC‑ACCGTC‑TCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCACCAACCACTGCCGTCa < 1:343370/251‑1 (MQ=255) caggCAGTAGGAAATAAACCCCAGCGCGATCCCTCGGGTAAGCGAAAAGCTAA‑ACGGCA‑CCAGCACGGGGGTAAAAAACGCCGGAACGGTTTCAGAAAGATCCTGCCAGTGCACGCGGGCCATACTGGAAGTCATCGGCCC‑GCAACC‑GTAAACCGGCGC‑CCCGGCGCCTGCTTACCCTGCC‑CCCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAGCAACCACTGCCGTCAg < 2:503548/246‑1 (MQ=255) ggTAGGGGATAAAGCCCAGCGGGAACCCTGCGGTAAACGGGAAGC‑GATACGGCA‑GCACCACGGGGGTAATAAACGCCGGAAAGGATTCAGGAAGGCCCTGCCAGTTCAGGCGGGCCAGGCGGGAAGTCAGCAGCGC‑GCCAAG‑GGAAAGCAGCGC‑ACGAGCGGCGGCGTGGCCGGGC‑CCCAGC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCGCTGCCGTCAGACCGGTa < 2:400428/250‑1 (MQ=255) aGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAACCTGA‑ACGGCA‑TCATCACGGCGGTTATAAACGCCGGCACAGATTCAGTAAGATCCTGCCCGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCACCGC‑ACCAGCTGCAGCGTACCCTGGC‑ACCATC‑CCCGCCAGCGGCGAAAGAAAGATAA‑CCAGCAAGAACAGCCCACCAACAACCACTGCCGTCACACCGGtc > 1:75630/1‑250 (MQ=255) gTAGGAGATAAAGCACGGGGCGTTCCCTTCGGTAACCGGGAAGCTGA‑AGGGCA‑GCACCACGGCGGTAATAACCGCGGGAACAGATTCAGTAAGACCCGGCCAGTCCACGCGTGCCAGACGGGAAGCAATCAGCAC‑GCCACC‑GTAAAGCGGCGC‑ACCAGCTGCAGCGTAGCCGGGC‑CCCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTAc < 2:147115/251‑1 (MQ=255) gagaTAAAGCCCAGCGCGATACCTTCGGTAATCGAGCAGCTGA‑ACGGAA‑TCATCACGGCGGTACTCAACGCCAGAACAGCATCAGTAAGATCCTGCCAGTTCAAGCGTGCCAGACTGGGAGTCATCAGCAC‑CCCAAC‑GGAAATCCGCCC‑ACCAGCCTCAGCGGAGCCCGGC‑ACCATC‑CCCGCCCGCGGCGACAGAAAGATAAACCA‑CCGGAACAGCCGACCCACCACCACTGCCggcacacccgcaagacc > 2:320243/1‑235 (MQ=255) aaGCCCAGCGCGCTACCTTCGGTAATCGAGAAGCTGC‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAAACGATTCAGTAAGATCCTGCCCGCTCCCGCGTGACCGACTGGGAGTCATCAGCAC‑GCCCAC‑GTAAATCACCGC‑ACCCGCTGCCGCGGAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGCCAGCAAGATAA‑CCAGCAGGACCCGCCGACCCCCAACCACCGCCGCCCGACCGGGACGACCGcccac > 2:510116/1‑248 (MQ=255) cccAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCAAGCGTGCCAGACTGGAAGGCATCAGCAC‑GCCAAC‑GGAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGGACGACCGCCAACCg > 1:156676/1‑250 (MQ=255) gcgATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCATTTCCCGCGTGCCAGACTGGAAGTCATCAGCCC‑GCCAAC‑GTAAATCAGCGC‑CCCAGCTGCAGCGTAGCCTGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGcc < 1:454509/251‑1 (MQ=255) ccgttACCTGCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGTTTCAGTAAGATCCTGCCATTTCCCGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCACC‑GTAAATCAGCGC‑CCCGGCTGCAGCTTAGCCTGCC‑CCCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGcc < 1:409953/247‑1 (MQ=255) gATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCgg > 1:390430/1‑251 (MQ=255) tgggTAATCGAAAAGC‑GA‑AAGGCAATCATCAGGGGGGAAAAAAACGCCGGAACAGTTTCAATAAGATCCTGCCAGTCCCCCCGTCCCAGGCTGGAAGCCACAACCAC‑GCCAAC‑GTAAATCACCGC‑ACCGGCTCCAGCGTAGCCTGCC‑CCCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAagag < 2:43976/247‑1 (MQ=255) cGGTAATCGAAAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATCCAGGAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCACCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGCCCGGTACGACCGCCAACCGATACGCCGGAAGAGGAc < 1:72040/251‑1 (MQ=255) gttAATCGATAAGCTGC‑ACGGCA‑CCACCACGGCGATAAAAACCGCCGAACCAGATCCAGAAACACCCTGCCAGTCCACGCTTGCCAGTCTGGAAGACATCAGCCC‑GCCAAC‑GTAAACCAGCGC‑ACCAGCTGACGCGTAGCCGGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACt < 2:145100/249‑1 (MQ=255) gagaAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAatat > 1:176786/1‑250 (MQ=255) gagaAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGCAACAGGTTCAGCAAGATCCTGCCCGTTCACCCGTGCCAGAATGGAAGTCATCAACAC‑GCCAAC‑GTAAATCAGCGC‑CCCAGCCGCCACGTCGCCTGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCCACAACCACTGCCGTCAGACCGGTACCACCGCCAACCGATACGCCGGAAGAGGAATCAatat > 1:500632/1‑250 (MQ=255) aaGCTGA‑ACGGCC‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGGACCTGCCAGGTCACGAGTGCCAGACTGGAAGTCATCAGCCC‑GCCCAC‑GTAAATCAGCGC‑ACCAGCCGCCGCGTAGCCTGGC‑ACCATC‑CCCGCCCGCGGCGCCCGAAAGAAAA‑CCAGCAggt > 2:242668/1‑174 (MQ=255) cTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAAAAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGGAGACTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCCGGAAAAGCAGACCAACCACCACTGCCGGCAGACCGGGACGACCGCCAACCGATACGCCGGGAGAGGACTCAATATAAGCCgg > 1:346312/1‑250 (MQ=255) aCGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAACCTGCCCGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGAAACGCCGGAAGAGGACTCAATATAAAACGTAACg > 2:87017/1‑251 (MQ=255) gCA‑TCAACCCGGCGGTAAAAAACGCCGGAACAGATTCAGTAAGACCCGGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCAAAC‑GTAAAGCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑CCCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGgaa < 1:480605/251‑1 (MQ=255) taataaACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAAc > 1:434802/1‑251 (MQ=255) taataaACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGCCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGAACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAAc > 1:319614/1‑251 (MQ=255) gCCGGAACAAATTCAGAAAAATCCTGCCGGTCCCCGCGTGCCAGACTGGAAGTCACCAGCCC‑CCCAAC‑TAAAAACGGCGC‑ACCAGCGCCAGCGTGGCCTGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGt < 2:392922/251‑1 (MQ=255) ccGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTc > 1:162389/1‑251 (MQ=255) ggAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCAc > 1:388748/1‑251 (MQ=255) gaaaaGATTCAGTAAGATCCTCCGATTACCCGCGTGCCAGCCGGAAAGTCACCAGCAG‑GCAAAC‑GAAAATAAGCCC‑ACCAGCTGCAGCGGACCCGGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAAAGGAAGAAGTACCGATAAACGAACCGGTCACg < 1:324634/247‑1 (MQ=255) gAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCCACAACCACTGCCGTCAGACCGGTACGACCGCAAACCGATACGCCGGAAGAGGACTCAATATCAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACg > 2:444803/1‑251 (MQ=255) aCAGATGCAGTAAGACCCTCCCAGTCCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GAAAACCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGa < 1:39607/251‑1 (MQ=255) aaGATTCAGTAAGATCCGCCCAGTCCACGCGTGCCAGACTGGAAGTCTTCAGCCC‑GCCAAC‑GAAAATCGGCGC‑ACCAGCGCCAGAGTAGCCGGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGCACCGATAAACGAACCGGTCACGGaa < 1:370414/250‑1 (MQ=255) gATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGa > 2:378419/1‑248 (MQ=255) aataccctcccagtcaccgcgTCCCAAACGGGAGGTCATCAGCCC‑GCCAAC‑GTAAACCAGCCC‑CCCAGCTGCAGCTTAGCTGGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGt < 2:381172/234‑1 (MQ=255) aaGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGt > 1:89126/1‑251 (MQ=255) aGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTc > 2:14780/1‑251 (MQ=255) aacccggCCAGTCCCCGCGTCCCAGACTGAAAGCCAT‑AACACCGCCAAC‑GTAAACCAGCGC‑CACAGCGGCAGCGTAGCCGGCC‑CCCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCg < 2:391854/245‑1 (MQ=255) ccTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCCCGGAAGAGATACTGTCGAc > 2:406215/1‑250 (MQ=255) tGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCCC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTCCGACCGCCAACCGATCCGCCGGAAGAGGACTCAATATAAGCCGTACCGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACAt > 2:207055/1‑250 (MQ=255) cAGTGCACGCGGGCCAGACTGGAAGTCATCAGCCC‑GCCAAG‑GTAAACCAGCGC‑ACCAGCTGCAGCGGAGCCGGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACATCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAg < 1:501292/251‑1 (MQ=255) agtccACGCGTGCCAGACGGGAAGTCATCAGCAC‑GCCAAC‑GTAAACCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑CCCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAgc < 1:78282/247‑1 (MQ=255) ccACGCGTGCCAGACGGGAAGTCATCAGCAC‑GCAAAC‑GAAAACCAGCGC‑ACCAGCTGCAGCGTAGCCGGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGcc < 1:320243/250‑1 (MQ=255) ccgggggccagccgggAAGTCATCAGC‑C‑CCCAACCGAAAACGAGCGC‑ACAGGCGGCAGCGT‑GCCTGGCCACCGCC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACGGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATAGAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTg < 2:223879/237‑1 (MQ=255) cggcccAGACGGGAAGTCATCGGCAC‑GCCAAC‑GTAAATAGGCGA‑ACCAGCTGCAGGGTAGCCTGAC‑CCCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCtt < 2:17418/247‑1 (MQ=255) cgccagccgggAAGTCACAAGCAC‑CCCAAC‑GAAAAACCGCGC‑ACAAGCGGAAGCGTGGCCTGGC‑CCCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCa < 2:346312/242‑1 (MQ=255) gCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCAt > 2:153952/1‑251 (MQ=255) ccAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGa > 2:54385/1‑217 (MQ=255) ccAGACGGGAAGTCATCAGCCC‑GCCAAC‑GAAAATCAGCGC‑ACCAGCGGCAGCGTAGCCTGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGa < 1:54385/217‑1 (MQ=255) gACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATgcgc > 1:290251/1‑251 (MQ=255) aCTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGAc > 1:213023/1‑128 (MQ=255) ggAAGTCATCAGCAC‑GACAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAAc > 1:432464/1‑177 (MQ=255) agccatcaGCAC‑GCCAAC‑GAAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAAtt < 1:221444/248‑1 (MQ=255) gTCACCAGCAC‑GCACAC‑GTAAATCAGCTC‑CCCAGCTGCAGCGTAGCCTGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAAttt < 1:77544/251‑1 (MQ=255) acgccAC‑GCCAAC‑GTAAAGCA‑CGCCACCAGCGCCAGCGGATCCGGCC‑CCCAAC‑CCCGCCAGCGGCGACAGAAATATAA‑CCAGCAGGAACAGCAGACCAACAACCTCTGTCGTCAGACCTGGACGACCGCCAACCGATACGCCTGAAGAGTACTCAAGAGAGGCCGTAACTGAATAAGTACCGATAAACGATCCGGTCTTGTAAGAGATACCGGCGACATACAGCGCCTGCTTCATGCGCGGGAATTTcccc < 1:485540/247‑1 (MQ=255) aGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCtt > 1:50430/1‑251 (MQ=255) cAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATcc > 1:366198/1‑251 (MQ=255) aaC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGAGACAGAACGATAA‑CCAGCAGGACCAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCg > 1:88254/1‑251 (MQ=255) aaC‑GTAAATCAGCGC‑ACCAGCTGAAGCGTAGCCTGGC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCg < 1:37929/251‑1 (MQ=255) ggcgccGTAGCCGGGC‑ACC‑TCACCCGCCGGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCa < 2:390430/246‑1 (MQ=255) cgccgcgacgccgggccccATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCa < 2:388748/234‑1 (MQ=255) ccctggtgcccgggccccctC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTc < 2:434802/230‑1 (MQ=255) cAGCGTACACTGGC‑ACAATC‑CCCGAAAGAGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACCACCACTGCCGTCAGACCGGTACGACCGCCAACCGATCCGCCGGAAGAGGCCTCAATATAAGCCGGAACGGAAGAAGTACCGATAAACGTACCGGTCACGGGAGAGATACTGTCGACATAAATCGCCTGCTTCATGCGCGGGAATTACACCTTCTCATCCGCCAGACCTGCTTTATCGGTCACg > 2:526919/1‑251 (MQ=255) ccTGGC‑ACCATC‑ACCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAATc > 1:352616/1‑249 (MQ=255) ggC‑ACCACC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAATCAGCGt < 1:289652/251‑1 (MQ=255) ccctC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAATCAGCGTACCg < 2:391453/248‑1 (MQ=255) | AACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGA‑ACGGCA‑TCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGCCAGACTGGAAGTCATCAGCAC‑GCCAAC‑GTAAATCAGCGC‑ACCAGCTGCAGCGTAGCCTGGC‑ACCATC‑CCCGCCAGCGGCGACAGAAAGATAA‑CCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAATCAGCGTACCG > NC_000913/3895306‑3895803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |