| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,505,088 | 0 | C | T | 30.4% | 75.7 / 10.8 | 46 | S311S (TCG→TCA) | yhfS | putative aminotransferase YhfS |
| Reads supporting (aligned to +/- strand): ref base C (7/25); new base T (14/0); total (21/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.85e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAGCGCCTGTGCGCCCT > NC_000913/3504843‑3505338 | aCATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGAct < 2:123411/250‑1 (MQ=255) gTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATCAAAGAGCGGCGGGGTTTTATATT‑TTGACCCT‑G‑caacc > 1:9051/1‑248 (MQ=255) aaCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGCATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGGTTTCATATT‑TTGACTCT‑G‑CACCCACCGGGTaagggaaggc > 1:29089/1‑250 (MQ=255) aaCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAAGCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTGAATGCGAATCGCACAATGTTCTGATTGTGGATGCGGCGGGCGAAACGTTCCGTAAAGGCGATAAAAGGGCGGCTGGAGTTGATATT‑TCGACTCT‑G‑CACCCACCGGGTaaggcaaggc < 1:311611/250‑1 (MQ=255) cctcCCCAAAGGGGCGAGGGAACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACcgcg < 1:40621/250‑1 (MQ=255) cGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCtt < 2:411250/251‑1 (MQ=255) ccGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGa < 1:284389/196‑1 (MQ=255) gTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGGGTTCATAAT‑TTGCCTCT‑G‑CACCCCCCGGGGAGGGCAAGGGAACGCGC‑tgtttggccccctccaccccacc > 2:301989/1‑229 (MQ=255) gAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑CCGACTCT‑G‑CACCCACCGGGTAAGGCAAAGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑Tc < 1:358225/251‑1 (MQ=255) gAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATGTCATATT‑GCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCGGGCGG‑CAA‑Tc < 2:193692/251‑1 (MQ=255) aaTTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCACTACTCTCACGCAAAATCAGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGCTTTTATATT‑TTGTCTCT‑G‑CACCCCCCCGGGAATGTACGGGACCGCGCCTTTTGCGC‑TCTTCCCGCACTCTGCCGG‑Caaacc > 2:245853/1‑248 (MQ=255) cGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGACTCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGGTTTTTTATT‑TTTATCCT‑T‑CACCCCCCCGGGAAAGCAAAGGACCGCCC‑TTTTTCGCCCCTTCCACCACCCCGGCGG‑GCA‑TCGGCTGATGaaca > 2:376187/1‑248 (MQ=255) ggTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTc < 1:309953/251‑1 (MQ=255) gTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCg < 1:225233/251‑1 (MQ=255) aTCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGAGTTCTTATT‑TTGCATCT‑G‑CACCCCCCCGGGGAGGCAAGGCACCGCCC‑TTTTTCGCCTCTTCCAGCCCTCTGGCGG‑CAA‑TCGGCTGATGAAACTccaaca > 2:520199/1‑245 (MQ=255) aGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑Aac < 1:520199/251‑1 (MQ=255) aGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACAGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGAGTTTATATT‑TCGACTTT‑T‑CACCCACCGGGCAAGGCAAGGCAAACCGC‑TTTTGCGCCTCTTTCCTCAATTCGGCGG‑CAA‑TCGGCTGCAGCAACTCGACacacaac > 1:529194/1‑245 (MQ=255) tAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCTCCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCt < 1:376187/250‑1 (MQ=255) aTACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TTGACTCT‑G‑CACCCCCCGGGGAAGGCAAAGCAACGCGC‑TTTTTCGCCCCTTCCCGCCATCTTGCGGGCAA‑‑CCGCTGGTGAAACTCCACAAAC‑CACACCTTCCAC‑Tgcgcctt > 1:452925/1‑248 (MQ=255) cGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCAc < 1:193435/251‑1 (MQ=255) cGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAAAGCGAATCGCACAATGTTCTGATTGTGGATTCGACTGCCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGGTTTCATATTCTTAATTCT‑‑‑CCCCCACCGGGACAGGGAGGGCACCCCAC‑ATTTGCGGGTCTTCCAGGGCACTGGCGG‑CAAATTGGC‑GATGAAAATCGAAAATC‑AACAACTTCGACCTG‑GCATTTACAATTACCGCG‑Ctttt > 1:351926/1‑251 (MQ=255) gTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTcc < 1:15548/249‑1 (MQ=255) tCACCGCTGCTATTCGGAGTAATGCGAATCGCACAATGTTCTGAGTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGgcacc < 2:161983/249‑1 (MQ=255) tCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGCAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCCTATT‑TTGACCCT‑GGCCCCCAC‑GGGTAAAGCAAGGCACCGCGC‑TTTTGCGCCCCCTTCAGCACTCTCGCGG‑CCA‑TCCGCTGACGAAACTAGACAATC‑ACAACCTTACAC‑TGCGCATTAGCCATCAACGCG‑ATTTTAACCTCCGgccccgc > 1:349583/1‑251 (MQ=255) gCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGGAAGGCAAGGCACCGCGC‑TTTTTCGCCTCTTTCAGAACTCTCGGGG‑CAA‑TAGGCTGCTGAAAATCCACAATC‑AACACACTCGAC‑TGAGCCTTAACAATCCCCGCG‑CTTTTTCCTTCCGgcaccgcacacc > 1:452027/1‑248 (MQ=255) tGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGGAACGCGC‑TTTTGCGCCCCTTCCCGCACTCTGGCGG‑CAA‑TCGGCTGATGAAAATCGACCATC‑CAAACCTTCGAC‑TGCGCATTTGCAATCACCCCG‑CCTTTCACTTCCGGCACCGCcccaccc > 1:68576/1‑250 (MQ=255) gCGATTCGGGTTAATGAGCATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGGTTTCATATT‑TTGGATCT‑G‑CACCCCCCGGGTAAGGCCAGGCACCCCGC‑CTTTGAGCCTCTTACCGCCCTCCTGCGG‑CAA‑ACGGCTGATGAAAATCGACAATCCACCACCT‑CGAC‑TGCGCCCTTGCAATCACCCCC‑CTTTTCCCtttccgccccccaccccccc > 1:104473/1‑233 (MQ=255) cGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGGTTTCATATT‑TCGACTCT‑G‑CACCCCCCGGGTAAGGGAAGGCACCGCGC‑TTTTGCGCCCCTTTCAGCACTCTTGCGG‑CCA‑TCGGCTGATGAAACTCGGCAATC‑AACACCTTCGAC‑TGCGCATTATCAATCACCGCG‑CTTTTTACCTCCGGCACCGCaccaccctttagc > 1:155144/1‑243 (MQ=255) tAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TTGACTCT‑G‑CCCCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTTCGCCTCTTCCCCCACTCTCGCGG‑CAA‑TTAGCTGGTGGAACTCCACAATCCAAC‑CCCTCCAA‑TGCGCACTAGCAATCACCCCG‑CTTTTTCCTTCCCGCCCCGCACCACCCGTTaacaaaacc > 1:113749/1‑244 (MQ=255) aTGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAg < 1:301989/251‑1 (MQ=255) cacaATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGAATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑Aacac > 2:385944/1‑172 (MQ=255) cacaATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGAATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑Aacac < 1:385944/172‑1 (MQ=255) aaTGTTCTGATTGTGGATGCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGAt < 2:452925/251‑1 (MQ=255) gTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCCTTTT‑TTGCCTCT‑G‑CCCCCACCGGGTAAGGCAAGGCCCCCCGC‑TTTTGCGCCTCCTCCCGCACTCCAGCGG‑CAA‑TCCGCTGATGAAACTCCACAATC‑AAAACCTTCGCC‑TGCGCATTAGCAATCACCGCC‑CTTTTTACTTCCCCCACCCCACCACC‑CTTTAGCAAAGCCAGCAACCCTTCCGATAcc > 1:444916/1‑251 (MQ=255) ttGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGGTTTCTTATT‑TTGACTCTTA‑CCCCCCCCGGG‑AAGGGGAGGCAACCCGC‑TTTTTCGCCGCCTCCCGCAACCTGGGGG‑CGA‑TCGGCAGGTGGAAATCCCCAAAC‑AACACCTTTCAC‑TGCGCGGTAGCAATCACCCCGGCTCTTC‑CTTCCGGCACCCCCCCACC‑GTTCAGCAAACCCacgaaacgttctgaatcccccgccc > 2:68805/1‑227 (MQ=255) ggtgGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCcctgcct < 2:155144/249‑1 (MQ=255) ccTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGc < 2:384558/251‑1 (MQ=255) cGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CCCCCCCCGGGTAAGGCAAGGCACCGCGC‑TTTGGCGCCTCTTCCAGCACGCGGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AAC‑CCCTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACt < 1:196602/251‑1 (MQ=255) aaCGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTgg < 1:155259/251‑1 (MQ=255) gTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TTGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCCCGC‑TTTTGCGCCCCCTCCCGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCCTCGAC‑CGCGCATTAGCAAACACCCCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAACCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGGGCATCCCCGgcgc > 1:106151/1‑251 (MQ=255) ggAAAGGCGATAAAAGAGCGGCGGGATGTCATATT‑CCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACGCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGGGCATGACTGGCGCAAaca < 2:104473/251‑1 (MQ=255) gAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGAt < 1:109588/213‑1 (MQ=255) cggcggGATTTCATATT‑TCGACTCT‑G‑CACCCCCCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCGGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACtt < 2:29089/251‑1 (MQ=255) ggcggGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTc > 2:469903/1‑251 (MQ=255) cATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAGCGCCtgt < 2:68576/251‑1 (MQ=255) atatT‑GCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCAACGAGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAGCGCCtgtg > 1:517649/1‑251 (MQ=255) cGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAGCGCCTGTGCGCCCt > 1:469570/1‑251 (MQ=255) | ACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGATTTCATATT‑TCGACTCT‑G‑CACCCACCGGGTAAGGCAAGGCACCGCGC‑TTTTGCGCCTCTTCCAGCACTCTGGCGG‑CAA‑TCGGCTGATGAAACTCGACAATC‑AACACCTTCGAC‑TGCGCATTAGCAATCACCGCG‑CTTTTCACTTCCGGCACCGCACCACC‑GTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAGCGCCTGTGCGCCCT > NC_000913/3504843‑3505338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |