| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,867,599 | Δ9,908 bp | yidQ–yidB | yidQ, yidR, cbrA, dgoT, dgoD, dgoA, dgoK, dgoR, yidX, yidA, yidB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3867599 | 3877506 | 9908 | 23 [0] | [0] 23 | yidQ–yidB | yidQ,yidR,cbrA,dgoT,dgoD,dgoA,dgoK,dgoR,yidX,yidA,yidB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3867598 | 0 (0.000) | 23 (0.400) | 23/488 | 1.1 | 100% | intergenic (‑176/‑130) | ibpA/yidQ | small heat shock protein IbpA/DUF1375 domain‑containing putative lipoprotein YidQ |
| ? | NC_000913 | 3877507 = | 0 (0.000) | intergenic (‑42/+198) | yidB/gyrB | DUF937 domain‑containing protein YidB/DNA gyrase subunit B | |||||
GATTCCAGTTGCTCGCCACTAACCGATTGATTGCCCTGTTGATTACTCAGCCAGGTTGAGAGAATGGCCCCTAAGCCGCCACTTTGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCAC > NC_000913/3877263‑3877754 | aagtggttaaacaaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctagtgcatagTAGAt < 1:402705‑M2/5‑1 (MQ=255) acaaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtatccagaacacccatcaggcgcgtcctcatcggctacgaggtaaaaaggtgtctggaaattaacttttcaagccttatcagcgggctttttttttcagtttatggtctattgcatagTAGATTTGCGGgatgat < 1:244905‑M2/17‑1 (MQ=255) aaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATa > 1:362968‑M2/233‑250 (MQ=255) aaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGAt > 1:393432‑M2/225‑251 (MQ=255) tccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtccggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGc > 2:453801‑M2/222‑251 (MQ=255) cggggataaatcaaagttacgcataatcaatagctcctgaaagcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcgggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcgggctttttttttcagtttatggtctattgcatagTAGATTGGCGGGATGATAATTGCGGCTTGCAGAAATAAAAAGGGCGGAgat < 1:279427‑M2/51‑1 (MQ=255) gggataactcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgatg > 1:431960‑M2/199‑250 (MQ=255) aaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTcc > 1:341512‑M2/194‑251 (MQ=255) ttacgcataatcaatagcacctgaactcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGCTTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGAGGAGATGATCTCCGCCCTTTTc > 2:80055‑M2/185‑251 (MQ=255) caatagctcctgaaatcagcgagaatgtaagaccttcaacaatggccaggtcaggtagccagaacacacctaaggcgagtactcatcggctacgatgtaaaaatgggtctggaaatcaacttttcaagccttatcagcggcctttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGcttct > 1:36235‑M2/174‑251 (MQ=255) atagctcctgaaatcagcgagcatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaacatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATCGCTTCTTg > 2:260312‑M2/172‑251 (MQ=255) ccggaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGAt < 1:80055‑M2/86‑1 (MQ=255) agcgagaatgtaagaccttccacactggacaggtcaggtagccagaacacccatcaggcgcgtactcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcctagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAACAGGGCGGAGATGCTCTCAGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGtgg > 2:443987‑M2/157‑250 (MQ=255) aacaccgtcaacaatgaacaggtcaggtagacagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtcaggaaatgaacttttcaagccttatcagcggactttttttttcagtttattgtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCTCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATcc < 2:21287‑M2/106‑1 (MQ=255) acaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaa > 1:479652‑M2/136‑250 (MQ=255) caggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAtt < 2:362968‑M2/128‑1 (MQ=255) aggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGGGAACCCCTTCTCCGGCCTACAAAATCATGGAAATTc > 2:434173‑M2/122‑250 (MQ=255) atcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtttt < 1:438694‑M2/147‑1 (MQ=255) caggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTc < 2:89542‑M2/148‑1 (MQ=255) cggctacgatgtaaaactgggtatggaaatgaacttttcaagccttatcagcggactttttttttctgtttatggtctattgcatagTAGATTTGCGGGATGATAATTTCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGACAGCCTTATCCGGCCTACAAAATCAAGACAATTCAATTCATTGCACGATTTTCTaaggcctgtaaagcg > 2:344077‑M2/88‑244 (MQ=255) ggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTc < 1:223472‑M2/183‑1 (MQ=255) agtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGt > 2:119822‑M2/22‑251 (MQ=255) aagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGACCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAAGAAACGCAc < 2:479652‑M2/248‑1 (MQ=255) | GATTCCAGTTGCTCGCCACTAACCGATTGATTGCCCTGTTGATTACTCAGCCAGGTTGAGAGAATGGCCCCTAAGCCGCCACTTTGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCAC > NC_000913/3877263‑3877754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |