| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,196,867 | Δ27,041 bp | [ymfD]–ymgJ | 37 genes [ymfD], ymfE, lit, intE, xisE, ymfH, ymfI, ymfJ, ymfK, ymfT, ymfL, ymfM, ymfN, ymfR, beeE, ymfQ, ycfK, tfaP, tfaE, pinE, mcrA, iraM, ymgK, ymgL, ycgX, bluR, bluF, ycgZ, ymgA, ariR, ymgC, pdeG, ymgF, ymgD, ymgG, ymgI, ymgJ |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1196867 | 1223907 | 27041 | 18 [0] | [1] 19 | [ymfD]–ymgJ | [ymfD],ymfE,lit,intE,xisE,ymfH,ymfI,ymfJ,ymfK,ymfT,ymfL,ymfM,ymfN,ymfR,beeE,ymfQ,ycfK,tfaP,tfaE,pinE,mcrA,iraM,ymgK,ymgL,ycgX,bluR,bluF,ycgZ,ymgA,ariR,ymgC,pdeG,ymgF,ymgD,ymgG,ymgI,ymgJ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1196866 | 0 (0.000) | 18 (0.320) | 18/486 | 1.6 | 100% | intergenic (+84/+1) | C0293/ymfD | small regulatory RNA C0293/putative SAM‑dependent methyltransferase YmfD |
| ? | NC_000913 | 1223908 = | 0 (0.000) | intergenic (+459/+371) | ymgJ/minE | uncharacterized protein YmgJ/Z‑ring positioning protein MinE | |||||
GAACCCTGGCTGAAGGCGGCTGTGCGCAAAGAATTTGTCGATGATAACCGGGTGAAGGTGAATAATGACGGTAATTTCGTCAATGATTTGTCGGGCAGACGTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGTGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATGGGAGAACAATGAATAATGAAATTGCGGGGTTATCATCTCCCAGTATATCCATACTAACAATAA‑GGTTATTTACTCAACCAGGCATAAACATTTTGTTTTGTGCGTGGGAACAGCCTTAAGGTG > NC_000913/1223674‑1224141 | cactgttattaggacaattatgaattaccactccttacacccgctcaaatattgttaaattgccggttttgtatcaacttctcacccgggactcgccaggggacagccaacaggcattgggtgcaatcaccttagcgttcaggtacatgcggaatggaaaaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACt < 2:437594‑M2/17‑1 (MQ=255) actgttattaggacaattatgaattaccactccttacacccgctcgaatattgttaaattgccggttttgtatcaactactcacccgggactcgccaggggacagccaaccggcattgggtgcaatcaccttagcgttcaggtacatgcggaatgtaacaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTg > 1:484276‑M2/234‑251 (MQ=255) taccactccttacacccgctcaaatattgttacattgccggttttgtctcaactactcacccgggactcgccaggggccagccaacaggcattgggtgcaatcaccttagcgttcaggtacatgcggaatgtaaaaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTAc > 2:310321‑M2/210‑251 (MQ=255) cgctcaaatattgttaaattgccggttttgtatcaactactcacccgggactcgccaggggacagccaacaggcattgggtgcaatcaccttagcgttcaggtacatgcggaatgtaaaaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAggg > 1:127590‑M2/194‑250 (MQ=255) agtgttaaattgccggttttgtatcaactactcacccgggactcgccaggggacagccaacaggcattgggtgcaatcaccttagcgttcaggtacatgcggaatgtaaaaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGGTTACAGGATGTTGAAAGGGAAAATTCTgg < 2:467408‑M2/67‑1 (MQ=255) tttgtgtcaactactcacccgggactcgcaaggggacagccaacaggcattgagtgcaatcaccttagcgttcaggtacatacggaatgtaaaaaaggccgcgcgcgcggccccttcacatacatctttagtactgagaccgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCCGTTTTCGTTTACAGGCTGTTGAAAGGGAAAATTCTGGGGAAAAAAAAGCCCGcc > 2:303710‑M2/168‑251 (MQ=255) actcacccgggactcgccaggtgacagccaacaggaattgggtgcaatcaccttagcgttcaggtacatgcggaatgtaaaaaaggccgcgagcgcggctccttcacatacatctttagtactgagactttttagcctagggaattattgtcgtaCCATCAACTATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCGGGGGCAAAAAAAGCCCGCCAGTTAcggcg < 2:371678‑M2/94‑1 (MQ=255) acccgggactcgccaggggacagccaacaggcattgggtgcaatcaccttagcgttcaggtacatgcggaatgtaaaaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGaaa > 1:420346‑M2/152‑250 (MQ=255) cggcactcgccgggggacagccaacaggcattgggtgcaatcaccttagcgttcaggtacaggcggaatggaaaaaaggccgcgagcgcggccctttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTGTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTc < 2:31208‑M2/103‑1 (MQ=255) ggggacagccaacaggcattgggtgcaatcaccttagcgttcaggtacatgcggaatgtaaaaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGGaacctcatcccttcgggg > 1:61160‑M2/137‑243 (MQ=255) gggacagccaacaggcattgggtgcaatcaccttagcgttcaggtacatgcggaatgtaaaaaaggccgcgagcgcggccccttcacatacatctttattactgagactgtttaacctagggaattattggcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGGTTACAGTATGTTGAAAGGAAAAATTCTGGGGCAAAAAAAGCCCGCCATTTACGTCGGGAAACCTCATCCTATGGgaga < 2:333460‑M2/116‑1 (MQ=255) gacagccaaccggcctcgggtgcaataaccttagcgttcaggtacatgcagaatgtaaaaaaggccgcgaccgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGTAAAGTCATCCTATTGGAGaa > 1:161967‑M2/134‑250 (MQ=255) aacaggcattgggtgcaatccccttagcgttcagttacatgcggaatgtaaaaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATGGGAGAACAATGaat < 2:420346‑M2/125‑1 (MQ=255) aatcaccttagcgttcaggtacatgcggaatgtaaaaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGGAACCACATCCTATTGGAGAACAAAAAAAAATTAAATTGaggggg > 1:356941‑M2/111‑250 (MQ=255) aaaaaaggccgcgagcgcggccccttcacatacatctttagtactgagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATGGGATAACAATGAATAATGAAATTGCGGGGTTATCATCTCCCAGTATATCCATACTAACAATa < 2:61160‑M2/173‑1 (MQ=255) tcacatacatctttagtactgagactgtttaaccaagggaattattgtcgtaCCATCAACGAATAACCTGCGCTTCGGCGCATTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGAAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATGGGAGAACAATGAATAATGAAATTGCGGGGTTATCAGCTCCCAGTATATCCATACTAACAATAA‑GGTTATTTACTCAACCAGGCATaa < 2:129075‑M2/198‑1 (MQ=255) gagactgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCATTTTTCTTTTACAGGATGTTGAAAGGGAAAATCCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATGGGAGAACAATGAATAATGAAATTGCGGGGTTATCATCTCCCAGTATATCCATACTAACAATAA‑GGTTATTTACTCAACCAGGCATAAACATTTTGTTGTGTGCGTgg < 2:431515‑M2/218‑1 (MQ=255) actgtttaacctagggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATGGGAGAACAATGAATAATGAAATTGCGGGGTTATCATCTCCCAGTATATCCATACTAACAATAA‑GGTTATTTACTCAACCAGGCATAAACATTTTGTTTTGTGCGTGGGAAc < 2:127590‑M2/222‑1 (MQ=255) agggaattattgtcgtaCCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAAACCCATCCTATTGGAGAACAAAGAATAATGAAAATGGGGGGGTATTATCTCCCCGTATATTCATACTAACAATAAAGGTT‑TTTTTTCAACCACGCATAAACATTTTTTTTTTTGCGGGGGGACAGCCTTAAAgtg > 1:19116/17‑251 (MQ=255) | GAACCCTGGCTGAAGGCGGCTGTGCGCAAAGAATTTGTCGATGATAACCGGGTGAAGGTGAATAATGACGGTAATTTCGTCAATGATTTGTCGGGCAGACGTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGTGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATGGGAGAACAATGAATAATGAAATTGCGGGGTTATCATCTCCCAGTATATCCATACTAACAATAA‑GGTTATTTACTCAACCAGGCATAAACATTTTGTTTTGTGCGTGGGAACAGCCTTAAGGTG > NC_000913/1223674‑1224141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |