Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,927,155 Δ12,222 bp [asnA][hsrA] [asnA], viaA, ravA, kup, rbsD, rbsA, rbsC, rbsB, rbsZ, rbsK, rbsR, [hsrA]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3927155 3939376 12222 57 [0] [0] 57 [asnA]–[hsrA] [asnA],viaA,ravA,kup,rbsD,rbsA,rbsC,rbsB,rbsZ,rbsK,rbsR,[hsrA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39271540 (0.000)57 (1.000) 54/488 0.1 100% intergenic (‑151/‑1) asnC/asnA DNA‑binding transcriptional dual regulator AsnC/asparagine synthetase A
?NC_000913 3939377 = 0 (0.000)coding (1236/1428 nt) hsrA putative transporter HsrA

AAATTGTTTCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAAAGTGAAAGCTCTGCCTGATGCCCAGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCA  >  NC_000913/3926908‑3927402
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        
aaaTTGTTTCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggcc                                                                                                                                                                                                                                                      <  1:226583‑M1/251‑5 (MQ=255)
        tCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGAGTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTATTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGGGTGTCGGTTTTGGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcactta                                                                                                                                                                                                                                               <  1:480720‑M1/250‑12 (MQ=255)
                   gCGTAAGCGGTGCGCGCATTGACCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcct                                                                                                                                                                                                                                    >  2:89338‑M1/1‑228 (MQ=255)
                       aaGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaact                                                                                                                                                                                                                               >  2:280486‑M1/1‑224 (MQ=255)
                          cGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaat                                                                                                                                                                                                                            <  2:3364‑M1/251‑31 (MQ=255)
                            gTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcg                                                                                                                                                                                                                          >  2:80512‑M1/1‑219 (MQ=255)
                                  gcATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagtt                                                                                                                                                                                                                    >  1:109604‑M1/1‑213 (MQ=255)
                                  gcATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagtt                                                                                                                                                                                                                    >  2:252661‑M1/1‑213 (MQ=255)
                                       gCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgc                                                                                                                                                                                                               <  1:341901‑M1/251‑44 (MQ=255)
                                          cATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtg                                                                                                                                                                                                            <  1:17288‑M1/251‑47 (MQ=255)
                                           aTTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtg                                                                                                                                                                                                            >  1:42959‑M1/1‑204 (MQ=255)
                                              aaTGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgacc                                                                                                                                                                                                         <  2:55250‑M1/250‑50 (MQ=255)
                                                      cAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGCTTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaac                                                                                                                                                                                                 >  1:97580‑M1/1‑193 (MQ=255)
                                                        ggATGCCACGGTCCAGATTGTCGATAAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATATGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacact                                                                                                                                                                                              >  1:124429‑M1/1‑191 (MQ=255)
                                                            gCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcactgacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgtt                                                                                                                                                                                           <  1:252661‑M1/250‑64 (MQ=255)
                                                             ccACGGTCCAGATTGTCGATCAGATAATTTTCCATAGTATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggcggcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttac                                                                                                                                                                                         <  1:37007‑M1/251‑66 (MQ=255)
                                                              cACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttacc                                                                                                                                                                                        <  2:75257‑M1/251‑67 (MQ=255)
                                                                        aTTGTCGATCAGATAATTTTCCATAGGCTTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcc                                                                                                                                                                              >  2:74008‑M1/1‑175 (MQ=255)
                                                                           gTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcatt                                                                                                                                                                            <  2:156289‑M1/250‑79 (MQ=255)
                                                                                     tAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGACTCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtc                                                                                                                                                                  >  2:353910‑M1/1‑162 (MQ=255)
                                                                                      aaTTGTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTGAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGTACGCTGGATTATAAAAAggcagcgcttacagcaacgcctaaactaatcgacagtggcttcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcag                                                                                                                                                                <  1:330409‑M1/251‑91 (MQ=255)
                                                                                          ttCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTCGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtc                                                                                                                                                                  >  2:102358‑M1/1‑157 (MQ=255)
                                                                                                agtatttTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTTTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagt                                                                                                                                                      <  2:438337‑M1/248‑101 (MQ=255)
                                                                                                               ggATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatc                                                                                                                                       >  1:122742‑M1/1‑136 (MQ=255)
                                                                                                                  ttGATGATTCATTCTCTTTTAGCCTTCTTTTTTAATGCATCAAACGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGCAGCAGGAGTATAAAAAggcagcacttacagcaacgactaaactaatcgacagttgctgcgtgaacgccagaacactgttaccgct                                                                                                                                                                                     >  2:306482‑M1/1‑133 (MQ=255)
                                                                                                                  ttGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatctacagttgctgcgtgaccgccagaacactgttaccgct                                                                                                                                                                                     <  1:306482‑M1/202‑70 (MQ=255)
                                                                                                                      tgatTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggta                                                                                                                                 >  1:164285‑M1/1‑129 (MQ=255)
                                                                                                                        attcattcTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatgttattcatcgcggtaaac                                                                                                                              <  1:280486‑M1/251‑125 (MQ=255)
                                                                                                                            attcTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcg                                                                                                                          <  2:122742‑M1/251‑129 (MQ=255)
                                                                                                                                   tttAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacat                                                                                                                   >  2:105522‑M1/1‑116 (MQ=255)
                                                                                                                                              tttttAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattaatcgcggttaactgcgtcgacatggccatccct                                                                                                         >  2:436521‑M1/1‑105 (MQ=255)
                                                                                                                                                                 gAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggca                                                                                         >  1:15293‑M1/1‑86 (MQ=255)
                                                                                                                                                                 gAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatgggattcatcgcggtaaactgcgtcgacagagccatccctaatataaacaacggcaaga                                                                                      <  2:42959‑M1/250‑165 (MQ=255)
                                                                                                                                                                       ggCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcat                                                                               <  1:301249‑M1/251‑172 (MQ=255)
                                                                                                                                                                                       attattGCATTTGTGTCGGTGTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacaggtgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgt                                                                                                                                                    <  1:94167‑M1/166‑103 (MQ=255)
                                                                                                                                                                                       attattGCATTTGCGTCGGTTTTTGTTGCTTAATCCTACGCAACAGAACGCCGGGGTATAAAAAggccgcacttacagcaccgcctaaactaagcgacagttgctgcgtgaccgccagaaaactgttaccgctgctggcattgtcatcggtcagatcggcaagtgt                                                                                                                                                    >  2:94167‑M1/1‑64 (MQ=255)
                                                                                                                                                                                          attGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagca                                                                                <  1:517006‑M1/231‑171 (MQ=255)
                                                                                                                                                                                          attGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagca                                                                                >  2:517006‑M1/1‑61 (MQ=255)
                                                                                                                                                                                           ttGCATGTGTGTCGGTTTTTCTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactcatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtg                                                           >  2:521143‑M1/1‑60 (MQ=255)
                                                                                                                                                                                             gCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgat                                                         >  1:240640‑M1/1‑58 (MQ=255)
                                                                                                                                                                                              cATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGTACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgatt                                                        <  1:336622‑M1/251‑195 (MQ=255)
                                                                                                                                                                                               aTGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattg                                                       >  1:410007‑M1/1‑56 (MQ=255)
                                                                                                                                                                                                       cGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTCTAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaccactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccctcccta                                                                                                        >  2:308709‑M1/1‑48 (MQ=255)
                                                                                                                                                                                                       cGGTTGTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgattgtattcatcgcggtaaactgcgtcgacatagccatcccta                                                                                                        <  1:308709‑M1/194‑147 (MQ=255)
                                                                                                                                                                                                        ggTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaa                                              <  1:102358‑M1/251‑205 (MQ=255)
                                                                                                                                                                                                            tttGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactg                                           >  1:369309‑M1/1‑43 (MQ=255)
                                                                                                                                                                                                                             aGCAACAGGACGCAGGAGTATAAAAAggccgcacttacagcaccgcctaaactaatcgacagttgctgcgtgaccgccagcacactgttaccgctgctggcattgtcatcggtcagctcggcaagtgtgctggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaat                         >  1:493449‑M1/1‑26 (MQ=255)
                                                                                                                                                                                                                                         cAGGAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagacctgagcgatcattagcccaataatccccgtgat             >  2:302167‑M1/1‑14 (MQ=255)
                                                                                                                                                                                                                                          aGGAGTATAAAAAggccgcacttacagcaacgcctaaaataatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggcgattgcaaagagaactgagcgatcattagcccaataatcaccgtgatc            >  1:475086‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                           ggAGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagctcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaatactcaccgtgatcc           >  2:187930‑M1/1‑12 (MQ=255)
                                                                                                                                                                                                                                             aGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcg                                                                                                                          >  2:406681‑M1/1‑10 (MQ=255)
                                                                                                                                                                                                                                             aGTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgagggtattcatcgcgggaaactgcg                                                                                                                          <  1:406681‑M1/138‑129 (MQ=255)
                                                                                                                                                                                                                                              gTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaataatcaccgtgatcccc         >  1:23979‑M1/1‑9 (MQ=255)
                                                                                                                                                                                                                                              gTATAAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaataatcaccgtgatcccc         >  1:14774‑M1/1‑9 (MQ=255)
                                                                                                                                                                                                                                                 taAAAAggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaataatcaccgtgatccccact      >  1:14633‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                                    aaaggccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacactgttaccgctgctggcattgtcatcggtcagatcggcaagtgtgatggtattcatcgcggtaaactgcgtcgacatagccatccctaatataaacaacggcaagatcagcatccatatagccattgctggtgattgcaaagagaactgagcgatcattagcccaataatcaccgtgatccccactaacg  >  2:149091‑M1/1‑3 (MQ=255)
                                                                                                                                                                                                                                                    aaagcccgcacttacagcaacgcctaaactaatcgacagttgctgcgtgaccgccagaacacggttaccgctgctggcagtgtcatcggtcagatcggcaagtgtgagggtattcatcgcggtaaactgcgtcgacatagccatcccgaatataaacaacggcaagagcagcatccatagagccattgctggtgagtgcaaagagaactgagcgatcattagcccaagaatcaccgtgatccccactaacg  <  2:68058‑M1/251‑249 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        
AAATTGTTTCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAAAGTGAAAGCTCTGCCTGATGCCCAGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCA  >  NC_000913/3926908‑3927402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: