Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,640,057 Δ7,591 bp [rrrQ]–[dicC] 18 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1640057 1647647 7591 46 [0] [0] 46 [rrrQ]–[dicC] [rrrQ],[ydfR],essQ,ynfU,cspB,cspF,ynfS,ydfT,ydfU,rem,hokD,relE,relB,ydfV,flxA,ydfW,ydfX,[dicC]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16400560 (0.000)46 (0.810) 41/488 0.3 100% coding (2/534 nt)
coding (310/312 nt)
rrrQ
ydfR
putative lysozyme
protein YdfR
?NC_000913 1647648 = 0 (0.000)coding (203/231 nt) dicC putative DNA‑binding transcriptional regulator DicC

CACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑T‑TTTTGTGTTCATAGATATTTATGATGAGGACGCTCGTGCTTATTGGCAGGATTTTCAATCTTAAAGGAGTACTGATGCTGCAGATAAGACTCAACTTTTTCTGACAATTTTTCTGCTACTTCCAGGAAGACTTGCCGGACGCTCCTTCTGGCTGCTGCCTCATAAAACTCCAGCGCAGCTCCTTCAACACGGTCCATGGCGACATCCAGGTCAAAAATTTCACCGTCAAAGCGTTCTTTGTCCTGTAA  >  NC_000913/1639811‑1640293
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                             
cACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAccc                                                                                                                                                                                                                                            <  1:398507‑M1/250‑4 (MQ=255)
  cGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCTATAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcc                                                                                                                                                                                                                                         <  1:46714‑M1/251‑7 (MQ=255)
    cTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGATTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccg                                                                                                                                                                                                                                       >  1:527532‑M1/1‑243 (MQ=255)
           gCGTTTACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGACAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGGATCTGA‑TCTTTTGTGTTCCcccgcccccttcgtc                                                                                                                                                                                                                                >  2:303882‑M1/1‑236 (MQ=255)
            cGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtct                                                                                                                                                                                                                               >  2:398827‑M1/1‑235 (MQ=255)
                    tagtcGCATTTTTCCTTCGACAGTTTCATATTGGGAAAACCGGTTTTTCCATCCACCACTGTGGCACCCCGACAGAAGGTCAATATGCCAGAACCATCGCGGTATGCCATTGTGAGGTTACCTTCTTTTTCGTCACGAAACTCGTCAAGTATCTGAGGAGCAGATGCGCCAACACCAATCAGCGCCAGAACGGCCGCCGACAGGCCGAATCTGA‑TCTTTTGTGTTCAcacgcccgcttcgtcttccgatat                                                                                                                                                                                                                       >  2:345369‑M1/3‑227 (MQ=255)
                         gCATTTCTCCTTCTACAGTTTCATATTGGGAAAACAGGCTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCCGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatc                                                                                                                                                                                                                  >  2:213066‑M1/1‑222 (MQ=255)
                                   ttCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttg                                                                                                                                                                                                        >  1:9082‑M1/1‑212 (MQ=255)
                                        cAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACACCGACAGATGGTCCATATGCCAGAACCATCGCGGCATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGCCAGGCCGAATCTGA‑TCTTTTGTATTCAcccgcccgcttcgtcttacgatataccacagatactttgtgatc                                                                                                                                                                                                   >  2:295614‑M1/1‑207 (MQ=255)
                                             tCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatac                                                                                                                                                                                               <  1:398827‑M1/250‑49 (MQ=255)
                                                 atTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCATCATCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaa                                                                                                                                                                                           <  1:71800‑M1/250‑53 (MQ=255)
                                                    gggAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctc                                                                                                                                                                                       >  1:32278‑M1/1‑195 (MQ=255)
                                                                 tttCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcc                                                                                                                                                                          >  1:374697‑M1/1‑182 (MQ=255)
                                                                   tccatccaCCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTAAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcct                                                                                                                                                                         <  1:380503‑M1/250‑71 (MQ=255)
                                                                      atccaCCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctg                                                                                                                                                                     >  1:346807‑M1/1‑177 (MQ=255)
                                                                       tcccccactgtgTCCCCCCGACAGATGGCCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGGCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcct                                                                                                                                                                      <  2:287531‑M1/245‑74 (MQ=255)
                                                                        ccaccaCTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgt                                                                                                                                                                    >  1:255992‑M1/1‑175 (MQ=255)
                                                                        ccaccaCTGTGGCACCCCGAAAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgt                                                                                                                                                                    >  1:114855‑M1/1‑175 (MQ=255)
                                                                                gtgGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcat                                                                                                                                                            <  1:116349‑M1/250‑84 (MQ=255)
                                                                                     cccccgACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTGTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCGcccgcccgcttcgtcttacgatattcatcataaactttgggatcatgctgaagctccccgccagatgcctcctgtagacgcatcgcgcg                                                                                                                                                      <  1:466648‑M1/250‑90 (MQ=255)
                                                                                          gACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGAAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgacctt                                                                                                                                                 >  2:409158‑M1/1‑157 (MQ=255)
                                                                                           ccaGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttc                                                                                                                                                <  1:89210‑M1/250‑96 (MQ=255)
                                                                                            cAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGCCCAGAAACTGGGCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaacttggggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcg                                                                                                                                               <  2:255992‑M1/251‑97 (MQ=255)
                                                                                              gATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcggg                                                                                                                                             >  1:355084‑M1/1‑153 (MQ=255)
                                                                                                                        ggTATGCCATTGTGTGGTTACCTTCTGTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTTTCTGA‑TCTTTTGTGTGCAcccgcccgcttcgtcgtacgatattcagcataaacgttgggatcatactgaggctccccggcagatgcctcctgtaggcgtgtggggcgacctgcgggaactaaatcccctttccagctataaa                                                                                                                   <  1:58556‑M1/251‑125 (MQ=255)
                                                                                                                             gCCATTGTGTGGTTACCTTCTTTTCCGTCCAGAACCTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGACCGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaa                                                                                                              <  2:346807‑M1/251‑130 (MQ=255)
                                                                                                                                               tcttTTTCGTCCAGAAACTGGTCAAGTATCTGAGGCGCAGATGCGCCAGCACCAATCCGCGCCAGAACGGCAGCCGACAGGCCGTCTCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgcccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaacgatcgg                                                                                             >  2:350927‑M1/1‑104 (MQ=255)
                                                                                                                                               tcttTTTCGGCCAGAAACGGGTCAAGTATCTGAGGAGCAGATGCGCCTGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgccctcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaa                                                                                                    <  1:350927‑M1/243‑140 (MQ=255)
                                                                                                                                                       ggccagAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGGGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgc                                                                                    <  2:374697‑M1/249‑156 (MQ=255)
                                                                                                                                                             aaaCTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttt                                                                              <  2:32278‑M1/251‑162 (MQ=255)
                                                                                                                                                                         tATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaacc                                                                  >  2:177698‑M1/1‑78 (MQ=255)
                                                                                                                                                                                ggagCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatac                                                           <  1:503547‑M1/251‑181 (MQ=255)
                                                                                                                                                                                ggagCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgttgttgaaccgaaatac                                                           <  1:161317‑M1/251‑181 (MQ=255)
                                                                                                                                                                                 gagCAGATGCGCCAGCACCAATCAGCGCCGGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTGGTGTTCAcccgcccgtttcgtcttacgatattcatcataaactttgggatcatactgaagctacccgccagatgccccctgtaatcgcatcgcgcgaccatcgggaactaaatcacctttccagctataaagcgaagccaaacgaatacctgctgcttgttcaagttttgtttttgaaccgaaataca                                                          <  1:345369‑M1/251‑182 (MQ=255)
                                                                                                                                                                                  agCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattaatcataacctttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccatttccagct                                                                                                                        >  1:364741‑M1/1‑69 (MQ=255)
                                                                                                                                                                                  agCAGATGCGCCAGCACCAATCAGAGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaataca                                                          >  1:167392‑M1/1‑69 (MQ=255)
                                                                                                                                                                                    cAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaa                                                        >  2:82711‑M1/1‑67 (MQ=255)
                                                                                                                                                                                                cACCAATCAGCGCCCGAACGGCAGCCGACAGGCCGTATCTGA‑TCTTTTGAGTTCAacagcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttt                                           >  2:215738‑M1/1‑55 (MQ=255)
                                                                                                                                                                                                  ccAATCAGCGCCAGAACGGCAGCCGACAGGCCTTATCTGATT‑TTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctagaaagcgaagccaaacgaatacctgctgcttgtgcaagtttggtttttgaaccgaaatacaaaggagcggcagtttta                                         <  2:503199‑M1/251‑199 (MQ=255)
                                                                                                                                                                                                                   ggCAGCCGACAGGCCGTATCTGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctt                        >  2:454708‑M1/1‑36 (MQ=255)
                                                                                                                                                                                                                        ccGACAGGCCGTATCTGA‑TCTTTTGTGTTCCcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagccccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattg                   <  1:303882‑M1/251‑221 (MQ=255)
                                                                                                                                                                                                                               gccttatctGA‑TCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagtgttaagcatttaaaacacctttattgttagtca            <  2:167392‑M1/247‑228 (MQ=255)
                                                                                                                                                                                                                                ccctatccgaagcttttgtgttcccccccccgcttcatcctacgatattcatcataaactgtgggatcatactgaagctccccgccagatgcctcctttagacgcatcgcgcgaccatcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttatggttagtca            <  2:214536‑M1/238‑228 (MQ=255)
                                                                                                                                                                                                                                 cGTATCTGA‑TCTTTTGTGCTCAcccgcacgcttcgtattacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgagcgaccttcgggaactaaatcccctttccagctataaagcgacgccaaacgaatacctgctgcttgtgcacgttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtctt           >  2:334089‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                                         gaacttttgtgtTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatacttaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtcataactaac    <  2:355084‑M1/246‑236 (MQ=255)
                                                                                                                                                                                                                                              tttGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtcataactaacaa  <  1:409158‑M1/247‑238 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                             
CACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGA‑T‑TTTTGTGTTCATAGATATTTATGATGAGGACGCTCGTGCTTATTGGCAGGATTTTCAATCTTAAAGGAGTACTGATGCTGCAGATAAGACTCAACTTTTTCTGACAATTTTTCTGCTACTTCCAGGAAGACTTGCCGGACGCTCCTTCTGGCTGCTGCCTCATAAAACTCCAGCGCAGCTCCTTCAACACGGTCCATGGCGACATCCAGGTCAAAAATTTCACCGTCAAAGCGTTCTTTGTCCTGTAA  >  NC_000913/1639811‑1640293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑