New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	60 (1.050)	56/486	0.1	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 2406787	0 (0.000)					intergenic (‑146/‑774)	lrhA/alaA	DNA‑binding transcriptional dual regulator LrhA/glutamate‑‑pyruvate aminotransferase AlaA

ACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTACCCCAAAAACC  >  NC_000913/2406538‑2407035                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                         acaGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCg                                                                                                                                                                                                                                                         <  2:162393/251‑1 (MQ=255)   aGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGCTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGAGGCTCATCATTAGCTGGTTAATGCTGTGGACCCACCAACAACCAATTTCATTTTTAAGGTGCCTCCCTTGCGCTTTCCTCCCGGACCCGGACGAAAGTAAAAATTCCTCTGAGCTGCCCTAAAAAAGCggg                                                                                                                                                                                                                                                       >  2:291758/1‑249 (MQ=255)    gCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGTCGAAAGTAAAAATGCCTATGAGTTGCACTAAAAAAGCggta                                                                                                                                                                                                                                                      >  1:246408‑M2/1‑247 (MQ=255)       gCAGCTGCGGCCGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTCTCGGACGATTTGCACTTATCATATATTATCCCTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatg                                                                                                                                                                                                                                                   <  1:77910‑M2/251‑8 (MQ=255)          gCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgact                                                                                                                                                                                                                                                >  1:397693‑M2/1‑241 (MQ=255)                       aaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgat                                                                                                                                                                                                                                   <  1:212611‑M2/251‑24 (MQ=255)                        aGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATCTGAGTTGCACTAAAAAAGCggtaatgactc                                                                                                                                                                                                                                               <  2:12698‑M2/238‑12 (MQ=255)                        aGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactc                                                                                                                                                                                                                                               >  1:12698‑M2/1‑227 (MQ=255)                                            caacaaATGTTCTCAGCAGATCGAGGTCGCGGTTAATTATCGACCGATTTGAACTTATCATATATTAACCCTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCAATTTGTAATGTGCATCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATCCATATGCGTTGCACTAAAAAAGCggaaatgactccaacttattgatagagttttatgtttagatact                                                                                                                                                                                                              <  1:77920‑M2/251‑45 (MQ=255)                                               caaATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGGGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                                                                                                                                           >  1:495597‑M2/1‑204 (MQ=255)                                               aaaatGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTTTAATGTGCCTCCCGGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATAGGAGTTGCACTAAAAAAGCggtaatgacgccaacttattgatagtgttttatgttcagataatgcc                                                                                                                                                                                                           >  1:213007‑M2/2‑204 (MQ=255)                                                                 cgaggtcgaggtTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaactgatttatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                                                                                                                                         >  1:242723‑M2/1‑186 (MQ=255)                                                                    ggtcgaggtTAATTATCGGACGATTTGCACTTATCATATATTATCCCTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCCGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATCTGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagcc                                                                                                                                                                                      <  2:85868‑M2/251‑69 (MQ=255)                                                                                     ggACGTTTCGCACTTATCATATATCCTGACTTACTGGCGGCTCCTCCTGAGCTCGTTCATGCTGTACACACACAAACAAGCCATTCCATTTGTCATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTCAAAATGCATATGAGTTGCCCTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                                                                                                                                                                                <  2:518451‑M2/240‑75 (MQ=255)                                                                                     ggACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                                                                                                                                     >  1:320913‑M2/1‑166 (MQ=255)                                                                                     ggACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACGGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCAGTGGTAAGGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccatcttattgatagtgttggatgttcagataatgcccgatgactttgtcatgcagctccaccg                                                                                                                                                                                >  1:518451‑M2/1‑166 (MQ=255)                                                                                        cGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGGTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                                                                                                                                  >  2:458404‑M2/1‑163 (MQ=255)                                                                                                   tATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg                                                                                                                                                       <  1:384197‑M2/251‑100 (MQ=255)                                                                                                           attatCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc                                                                                                                                               >  2:131136‑M2/1‑144 (MQ=255)                                                                                                              atCCCTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                                                                                                                                             >  2:373870‑M2/1‑141 (MQ=255)                                                                                                                cACTTACTGGCGGCTCATACTGAGCTTGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCACCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgcctccaacttattgatagtgttttttgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                                                                                                                                          >  1:484494‑M2/1‑139 (MQ=255)                                                                                                                     aCTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCGCTAAAAAAGCggtaatgactccaacttattgatagggttttatggtcagataatgcccgatgtttttgtcatgcagctccgccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                                                                                                                                      >  1:86553‑M2/1‑134 (MQ=255)                                                                                                                       tGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgccttccgtcccagccgtgcc                                                                                                                                          <  1:508081‑M2/244‑113 (MQ=255)                                                                                                                       tGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTGTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactgtgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                                                                                                                                          >  2:508081‑M2/1‑132 (MQ=255)                                                                                                                          cggcTCATACTGAGCTGGTTAATGCTGTGCACACACCCACCCGCAATTCCATTTGTAATGTGCCTCCTTGGCAGTTACATCCGGCACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgataatgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcc                                                                                                                                <  1:44627‑M2/251‑123 (MQ=255)                                                                                                                            gcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAATCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcaggcagctccacctattttgagaacgacagcgacttccgtcccagccgtgccaagtgctgcctc                                                                                                                              >  1:57526‑M2/1‑127 (MQ=255)                                                                                                                             cTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                                                                                                                              <  1:211579‑M2/250‑125 (MQ=255)                                                                                                                                aTACTGACCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCAGGACCCCGGACGAAAGTACAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                                                                                                                              <  1:329059‑M2/247‑125 (MQ=255)                                                                                                                                     gAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg                                                                                                                     <  1:333023‑M2/251‑134 (MQ=255)                                                                                                                                             tAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccg                                                                                                             <  2:511963‑M2/251‑142 (MQ=255)                                                                                                                                             tAAGGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGGTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgaggactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgcc                                                                                                              >  1:85868‑M2/1‑110 (MQ=255)                                                                                                                                                 gCTGTGCACAGACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGCTACCTCAGGAACCCGGACGAAAGTACAAATGCATTTGAGCTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtaatgcagctccaacgattttgagaacgacagcgcattccgtcccagccgtgccaggtgctgcctcagattcaggttattccgctc                                                                                                          <  2:361297‑M2/250‑145 (MQ=255)                                                                                                                                                             caaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatacagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgcggcgt                                                                                              <  2:11608‑M2/250‑157 (MQ=255)                                                                                                                                                                 caaACAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtggtttatggtcagataatgcccgatgactttgtcatgcagcgccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggggctgccgcagattcaggtgatgccgcgcaattcgcggcgtatatc                                                                                         >  2:77910‑M2/1‑90 (MQ=255)                                                                                                                                                                  aaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcg                                                                                        <  2:154828‑M2/251‑163 (MQ=255)                                                                                                                                                                       cttcCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgc                                                                                   <  2:287361‑M2/250‑168 (MQ=255)                                                                                                                                                                               tGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattac                                                                            >  2:375149‑M2/1‑76 (MQ=255)                                                                                                                                                                                gTAATGTGCCTCCCTGGCAGTTTCATCCGGAACACGGACGAAAGTAAAAATGCATATGCGTTGCACTAAAAAAGCggcaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgt                                                                          <  2:356629‑M2/251‑177 (MQ=255)                                                                                                                                                                                   aTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgc                                                                        <  1:14454‑M2/250‑179 (MQ=255)                                                                                                                                                                                       gCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctt                                                                   >  1:154828‑M2/1‑68 (MQ=255)                                                                                                                                                                                        ccTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagcttt                                                                  <  1:145389‑M2/251‑185 (MQ=255)                                                                                                                                                                                        ccTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgagtacgtgcagcttt                                                                  >  2:33307‑M2/1‑67 (MQ=255)                                                                                                                                                                                          cccctGTCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttagtgatagtgtttgatgttcagataatgcccgatgactttgtcatgcagcaccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgcttcctcagattcaagttatgccgctcaagtcgcggcgtatatcggttgctgattacgtgcagctttcc                                                                >  2:329059‑M2/2‑65 (MQ=255)                                                                                                                                                                                                  aGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggc                                                        >  1:225566‑M2/1‑57 (MQ=255)                                                                                                                                                                                                   gTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcg                                                       <  2:37713‑M2/251‑196 (MQ=255)                                                                                                                                                                                                            ggAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgctagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggagctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcat                                               <  2:189290‑M2/250‑204 (MQ=255)                                                                                                                                                                                                            ggAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgaccgatgactttgtcatgcagctccaccgattttgcgaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtctatcgcttgctgcttacgtgccgctttcccttaaggcgggattaatc                                              <  2:364362‑M2/251‑205 (MQ=255)                                                                                                                                                                                                              aaCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatac                                             <  2:105978‑M2/250‑206 (MQ=255)                                                                                                                                                                                                                 ccGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcg                                         >  1:323950‑M2/1‑42 (MQ=255)                                                                                                                                                                                                                       gAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattagatcgggagagcgg                                   <  2:141936‑M2/251‑216 (MQ=255)                                                                                                                                                                                                                       gAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggatt                                                  >  1:141936‑M2/1‑36 (MQ=255)                                                                                                                                                                                                                        aaaGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcccccgattttgagaacgtcatcgacttccgtcccagccgtgccaggtgctgcctcagattcatgtgatgccgctcaattcgctgcgtatatcgcttgctgattacgt                                                                          >  2:83847‑M2/1‑35 (MQ=255)                                                                                                                                                                                                                        aaaGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctacaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgt                                                                          <  1:83847‑M2/211‑177 (MQ=255)                                                                                                                                                                                                                             aaaaaTGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatcc                              >  1:229849‑M2/1‑30 (MQ=255)                                                                                                                                                                                                                                   gCATATGAGTTGCACTAAAAACGCggtaatgactccaacttattgatagcgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatcc                       <  2:163880‑M2/251‑228 (MQ=255)                                                                                                                                                                                                                                     atatGCGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccat                     <  2:271888‑M2/251‑230 (MQ=255)                                                                                                                                                                                                                                       atGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatat                   <  1:439771‑M2/251‑232 (MQ=255)                                                                                                                                                                                                                                          aGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcac                <  1:398969‑M2/251‑235 (MQ=255)                                                                                                                                                                                                                                           gTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcacc               >  1:105978‑M2/1‑16 (MQ=255)                                                                                                                                                                                                                                              gCACTAAAAAAGCggtaatgactccaacttcttgatagtgttttatgttccgataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacg            <  1:493966‑M2/251‑239 (MQ=255)                                                                                                                                                                                                                                              gCACTAAAAAAGCggtaaggactccaacttattgatagtgttttatgtgcagataatgcccgatgactttgtcatgcagctccaccgatgttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgcggattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccggcatccatatcaccac             >  2:212611‑M2/1‑13 (MQ=255)                                                                                                                                                                                                                                                        ggcggtaatgactccaacttattgatagtgttttatgttcagataaggcccgatgactttgtcaggcagctccaccgattttgagaacgacagcgactgccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaagggtg  >  2:22758‑M2/2‑3 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                         ACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTACCCCAAAAACC  >  NC_000913/2406538‑2407035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.