| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,299,522 | Δ12,535 bp | mdtP–alsB | mdtP, mdtO, mdtN, ytcA, yjcS, alsK, alsE, alsC, alsA, alsB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4299522 | 4312056 | 12535 | 47 [0] | [1] 48 | mdtP–alsB | mdtP,mdtO,mdtN,ytcA,yjcS,alsK,alsE,alsC,alsA,alsB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4299521 | 0 (0.000) | 47 (0.820) | 39/488 | 0.4 | 99.0% | intergenic (‑155/+43) | fdhF/mdtP | formate dehydrogenase H/putative multidrug efflux pump outer membrane channel |
| ? | NC_000913 | 4312057 = | 1 (0.020) | intergenic (‑15/+44) | alsB/alsR | D‑allose ABC transporter periplasmic binding protein/DNA‑binding transcriptional repressor AlsR | |||||
TCCGCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTTCTCGACGACGGGACCTGCCTGATACCCGCCGCCCAGCGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCG > NC_000913/4299278‑4299766 | cccgCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaagg < 2:129612‑M1/250‑8 (MQ=255) cccGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACGATTTATTCAAAACTCTGACGAAAATCAGGCTTTCGTCAGTTTTGACGTGAggtaaggggac < 2:493004‑M1/251‑12 (MQ=255) ggACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagt < 1:170841‑M1/251‑15 (MQ=255) gACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACATGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagt > 1:476573‑M1/1‑236 (MQ=255) aTTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTGTTGACGTGAggtaaggggacagtaactc < 2:191545‑M1/251‑20 (MQ=255) ccGTTATCGCCGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgat > 2:176654‑M1/1‑226 (MQ=255) ccGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgat < 1:152231‑M1/251‑26 (MQ=255) tATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggc < 1:176654‑M1/250‑29 (MQ=255) aTCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCGCGTCTACAGTATGCATCTTGTATGCCACATTTTATGTGGGGTCATTCCCTGATAGTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGGCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcgg < 1:485699‑M1/251‑31 (MQ=255) acCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacc < 1:196984‑M1/251‑38 (MQ=255) acCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacc < 1:270253‑M1/251‑38 (MQ=255) ggTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgattgcggaattacctttt < 1:442417‑M1/251‑42 (MQ=255) tGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttc < 1:365904‑M1/250‑44 (MQ=255) ttGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttattt > 2:319336‑M1/1‑202 (MQ=255) ttGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCGGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGGCGTCAGTTTGGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatt < 2:361316‑M1/250‑49 (MQ=255) tGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggagagtaactccgcgatggcggaattacctttttcttattt < 1:215302‑M1/250‑50 (MQ=255) tGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttattt < 2:385009‑M1/250‑50 (MQ=255) gCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttc < 1:76233‑M1/250‑51 (MQ=255) cTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctt > 2:488602‑M1/1‑195 (MQ=255) cTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctt < 1:488602‑M1/234‑40 (MQ=255) gATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcc < 1:319336‑M1/251‑59 (MQ=255) tGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaatt > 2:23971‑M1/1‑171 (MQ=255) gacgtctcttttcatcggtcTCGCTCCAGTTAGTCCAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTCTTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGGCGTGAggtaaggggacagtaactccgcgatggcggaattacctttttattatttcagcgcgcctggtgagaagaaatcaacaattg > 2:452043‑M1/9‑170 (MQ=255) cATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttt < 1:529729‑M1/250‑93 (MQ=255) gTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccata < 1:286838‑M1/251‑99 (MQ=255) tctcGCTCCATGTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattaccttcttcttatttcagcgcgcctggtgagaagaaagcaacaattgcgccggttttttcca < 2:304092‑M1/248‑97 (MQ=255) tctcGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagacatcaacaattgcgccggttttttccatat > 2:455156‑M1/1‑152 (MQ=255) tctcGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGAATACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattaccttcttcttatttcagcgcgcctggtgagaagaaatcaccaattgcgccggttttttcca > 1:304092‑M1/1‑152 (MQ=255) aatcaaatcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttg < 1:23971‑M1/251‑113 (MQ=255) aaatcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttc > 2:414448‑M1/1‑135 (MQ=255) atcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACAGTTTATGTGGGTTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggtttggtccatattaatattagcgtgttcaat < 2:438438‑M1/251‑119 (MQ=255) cGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTACCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgattgcggcattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgagccggttttttccatattaatattagcttgttcaatgttg > 2:457116‑M1/1‑129 (MQ=255) cATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttg > 1:368730‑M1/1‑127 (MQ=255) aTGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaa > 1:52136‑M1/1‑105 (MQ=255) ttATGTGGGGTCATTCCCTGGTTTTACGGGCACTATTTAATCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGGCGTGAggtaaggggaccgtaactccgcgatggcggaattgcctttttcttatttcagcgcgcctggttagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatggtgtgctgggcgacagagacaaaaaaagcgtccagcaaggttggatg < 2:132331‑M1/250‑167 (MQ=255) tCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccg > 1:128771‑M1/1‑70 (MQ=255) atTACGGGCTCTATTTATTCAAACCTCTCACGAAAAACAGGCTGTCGCCAGTTTTGACGTGAggtaaggggacagaaactcagcgatggcggaattacctttttattatttcagcgcgcctggagcgaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggaattac > 2:315018‑M1/1‑62 (MQ=255) atTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgtt > 1:164992‑M1/1‑62 (MQ=255) atTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgtt < 2:164992‑M1/183‑122 (MQ=255) aCGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacga < 1:455156‑M1/250‑192 (MQ=255) ttattCAAAACTCTGACGAAAAACAGGATGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggc > 1:180308‑M1/1‑48 (MQ=255) gACGAAAAACAGGCTGTCGTCAGTTGTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcgtgccgaggcattacgacctaataacggcgtttccggggct < 1:452043‑M1/249‑216 (MQ=255) aaaaaCAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgttt < 2:440610‑M1/237‑208 (MQ=255) aaaaaCAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgttt > 1:440610‑M1/1‑30 (MQ=255) aaCAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagca > 2:361947‑M1/1‑27 (MQ=255) aGTTTTGACGAGCggtaaggggccagtcactccgcgatggcggaattacatttttcttatttccgcgagcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggc > 2:478532‑M1/1‑13 (MQ=255) aCGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggccagtttc < 1:189860‑M1/251‑246 (MQ=255) | TCCGCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTTCTCGACGACGGGACCTGCCTGATACCCGCCGCCCAGCGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCG > NC_000913/4299278‑4299766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |