| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,720,136 | IS3 (–) +3 bp :: +TCA | coding (88‑90/213 nt) | cspA → | cold shock protein CspA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 315229 = | NA (NA) | 50 (0.890) +TCA |
48/482 | 0.2 | 100% | noncoding (1/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 3720136 = | 0 (0.000) | coding (88/213 nt) | cspA | cold shock protein CspA | |||||
| * | ? | NC_000913 | = 2171428 | NA (NA) | 60 (1.050) | 53/486 | 0.1 | 100% | noncoding (1258/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | = 3720138 | 0 (0.000) | coding (90/213 nt) | cspA | cold shock protein CspA | |||||
GTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCC > NC_000913/2171181‑2171677 | gTATGAGCGCAAAAGGGTGCTGTTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTGTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGGGGGTAGGA‑TCAGTc < 2:404454/251‑1 (MQ=9) aTGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCa < 1:372013/250‑1 (MQ=31) aTGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCAt < 1:428135/251‑1 (MQ=31) gcAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTCTCATTCGCTGAAAGTGGAATGCATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATCTCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGCACAATTTGTAAACAAGAACCTCGCTTAAGCCTGTGTCCATATTTCGTGGGTAGGA‑TCCGTCATCCCTTc > 1:322711/1‑251 (MQ=11) aaaGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTg > 1:45920/1‑251 (MQ=35) aaGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGGGGGGAGGA‑TCAGTCCTCCCTTCGTgg > 2:10787/1‑251 (MQ=21) aCGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTTTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACt < 2:497979/251‑1 (MQ=255) aTAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTgcc < 1:40506/251‑1 (MQ=255) aTAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAAAAAGAACCTCGCTTAGGCCTGTGTCCATATTAAGTGGGGAGGA‑TCAATCATCCCTTCGTGGATTATTTTGACTgcc > 2:310269/1‑251 (MQ=255) cTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTgcg > 1:408347/1‑251 (MQ=255) gCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCt < 1:310269/251‑1 (MQ=255) aaGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGt < 1:457169/251‑1 (MQ=255) tcttTCATGCGCTGAAAGTGGAATGTATCCAGGGAGAACGCGTTAGCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATAACGAACGTGAATACAATCGGTGGCGGCGGCACATGTGGTGTGGCGGCCTGAGTCCGGAACAATTTGAAAGCAATAACCTCGCTTAGGCCGGTTGCCATATTTCGTGGGTATGA‑ACAGTCATCCCGTCTTTTATCATTTTGACAGCCGCCGGCGCTACTCTGttttt < 2:322711/250‑1 (MQ=9) ttCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGGGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGtttttt < 1:220599/248‑1 (MQ=255) gAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGc < 1:422956/249‑1 (MQ=255) gAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCgg > 1:278430/1‑250 (MQ=255) aTGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGGAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGGGCTGAAATc > 2:371938/1‑251 (MQ=255) ttATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGTCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACtt < 2:525124/249‑1 (MQ=255) cGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGCGGCGGCCGCACAGTTGGTGTGGCGGCCCCAGTCCGGGACAAATTGAAAACAAGAAACTGGCTTAAGCCTGAGGCCCTATAACGAGGGTAGGA‑TGAGTCTTCCCCTCGTGGATCATTTTGACTGCCGCCTGCGCTATTTTGTTTTTTGGCGGGCTGGCGGGCTGAAATCGCTCTTTTAAACAC‑ACTCCCTGGGtctc > 2:11613/1‑251 (MQ=18) gggAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTTACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCg > 2:150762/1‑251 (MQ=255) aatGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑TAACCCGACTTCCTGGGTCTCGGTTTCa > 2:373622/1‑250 (MQ=255) aatGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCa < 1:373622/250‑1 (MQ=255) gCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATAGGTGGGGACGGCCCAGTTGGTGTGGCGGCCTAAGTACGGAACAATTTGCAAACAAGACCCTAGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCCTCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGAGCTGGCGAGCTGACATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTAt > 1:487633/1‑251 (MQ=25) cGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTAtt > 1:376218/1‑251 (MQ=255) aaCGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGAGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCCTATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTAcc > 1:262810/1‑249 (MQ=255) gtgtTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCCTTTTTACTGCCACCTGCGCTCTTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAAACCGACTTCCTGGGTCTCGGTTTCCCTATTTCCAGACat > 2:302672/1‑251 (MQ=21) gtTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTGGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACatt < 1:233116/250‑1 (MQ=255) tAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACattatt < 1:302672/250‑1 (MQ=255) tAATTATATAGAATGTGATGACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGGCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCTAGCTGAAATCGCGGTTG‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACattatt < 1:219885/250‑1 (MQ=25) atatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCGCAGTCCGGAACAATTTGAAAACAAGAACCGCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACGGCCGCCTTCTTTAGTCTGTTTTTTGGCGCGCTGGCGATCTGAAATCGCTCGTT‑AATCCCGACTTCCTGGTTCTCGGTGTCACTATGACCGGTCAGTATTTTcgcc < 2:215532/251‑1 (MQ=18) gAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTGTCACTATGTCCAGACATTATTTTCGCCGCAcc < 2:520702/251‑1 (MQ=255) gATTACAATGGGTGGCGGCGGCACAGTTGGTGTGGCGGCCGCAGTCCGGAACAATTTGAAAACAAGAACCGCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AACCCCGACTTCCTGGGTCTCGGTTTCACTATTCCCAGACATTATTTTCGCCGCACCGCCATg < 2:154209/251‑1 (MQ=255) aTTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACACTTTGGAAACAAAAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGAATGCCGGCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGCAATTATTTTCGccgccccgccctg > 2:50351/1‑247 (MQ=37) aCAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCCCACCGGAAACATTCGAAAACAAAAACCTCGCTTAGGCCTGCGTCCACATTACGTGGGCCGGA‑TCAGTCATCCCCTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTAGCGCGCTGGCGAACTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGCCTCGGTTTCACTATTACCAGACATTATTTTCACCGCACCGCCATGac > 1:317425/1‑248 (MQ=37) aCAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGTAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGTTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AACCCCGACTTCCTGGGTCTCTGTTTCACTATTCCCAGACATTTTTTTCGCCGCACCGCCATGaaa < 1:111312/250‑1 (MQ=255) acatttGGTGTGGGGGCCTCAGTCCGGAACAATTTGAAAACAAGATCCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTTTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AACCCCGACTTCCTGGTTCTCGGTTTCACTATTCCCAAACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCtttt < 2:419524/247‑1 (MQ=38) aGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGCCTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAACCGCGTAACCACGCCtttttt > 2:467966/1‑250 (MQ=255) tGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCGGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGtt < 1:60288/250‑1 (MQ=255) tgtgGCGGCCTCAGTCCGGAACAATTTGCAAACAAGAAACTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCg > 1:194704/1‑249 (MQ=255) tgGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCgcga > 2:22806/1‑247 (MQ=255) ggcggcCTCAGTCCGGCACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGaa > 1:443368/1‑250 (MQ=255) ggcggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGaa > 1:263448/1‑250 (MQ=255) gcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAACGCGCGTAACCACGCCTTTTTGTTCGAGAAAgcgc > 2:458233/1‑251 (MQ=255) ccGGAACAATTTGAAAACAAGAACCGCGCTTGGGCCTGTTTCCATATTCCGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCCCCTGCGCTATTCTTTTTTTTGGCGCGGTGGCGAGCTAAAATCGCTCTTG‑AAACCCGACTTCCTGGTTCTCGTTTTCACTATTACCAGACATTTTTGTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGc < 2:262810/251‑1 (MQ=255) aTTTAAAAACAAAACCCCCGCTTAGGCCTGGGTCCATATTAC‑TGGGTTGGAATCAGTCATCCCTTCGGGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCGAAAATCGCTCTTT‑AAACCCGACTCCCTGGGTCTCGGTTTCACGATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTg < 2:194704/251‑1 (MQ=255) tGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTGGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTc < 1:470047/250‑1 (MQ=255) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTcc > 1:425653/1‑251 (MQ=255) ccGCTTTGGCATGTGTCCATATTTCGTGGGTAGGA‑TCAGTCCTCCCTTCGTGTATCATTTTGCCTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCGGGGTCTCGTTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGgcagca < 2:408347/250‑1 (MQ=255) gtCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCGGAAATCGCTCTTT‑AAACCCGACTTcc < 1:459108/117‑1 (MQ=255) gtCCATATTACGAGGGCAGGA‑TCAGTCATCCCTTCGTGGACCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTcc > 2:459108/1‑117 (MQ=255) tACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGa > 2:112860/1‑250 (MQ=255) gTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCAc > 2:138636/1‑251 (MQ=255) ggA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGt > 2:74590/1‑251 (MQ=255) tCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTcc > 2:38673/1‑251 (MQ=255) cAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTccc > 1:34594/1‑251 (MQ=255) | GTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGA‑TCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTT‑AAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCC > NC_000913/2171181‑2171677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |