| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,161,565 | 0 | A | C | 34.3% | 95.1 / 12.9 | 67 | W369G (TGG→GGG) | ftsP | cell division protein FtsP |
| Reads supporting (aligned to +/- strand): ref base A (12/32); new base C (20/3); total (32/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.19e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGTCTGACTGTTGAAGTAGAACGGGAAGTGCGCCCAGGAAGGCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTC > NC_000913/3161314‑3161815 | cGTCTGACTGTTGAAGTAGAACGGGAAGTGCGCCCAGGAAGGCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCT‑GCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCca < 1:158034/251‑1 (MQ=255) gtGAAGTAGAACGGGAAGTGCGCCCAGGAAGGCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTcc < 1:62608/250‑1 (MQ=255) tAGAACGGGAAGTGCGCCCAGGAAGGCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGGCATCAAAACGGTTGACGTCCCACC‑GCTGTCCATTAAt > 1:265176/1‑251 (MQ=255) aaCGGGAAGTGCGCCCAGGAAGGCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCCCGGGGACAACAATACGGTTGGCGTCCCCCA‑GCTGTCCCTTAATAcc > 2:289169/1‑251 (MQ=255) gggAAGTGCGCCCAGGAAGGCTTACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCATACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCgg < 1:202835/251‑1 (MQ=255) aagggcgcCCAGGAAGGCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGtc < 2:94955/247‑1 (MQ=255) aaGGCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGGCCCGCGTTCCCCCGTTCCTTGTT‑GCGCGGGGACATCAATACGGGTGGCGTCCCCCC‑GCTGGCCATTAATTCCCggggactccccccgactg > 2:108873/1‑236 (MQ=255) aaGGCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGGACCGTCCAGCGTTCCCCCGTTCCTTGCT‑GCGCGGGGACATCAATACGGTTGACGTACCCCA‑GCTGGCCCTTAATACCCCGGTCAT‑CACCCAGACTg > 1:64899/1‑251 (MQ=255) gCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGata < 2:142759/251‑1 (MQ=255) atacgctaaaTAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACCTTCCTTGCT‑GCGCGGGGACATCAAAACGGGTGACGTCCCACA‑GATGTACATTAATACCCCGTGCAT‑CACCCAGAATGacat > 1:217193/8‑248 (MQ=255) gacggAAATAAACAAGCACCACCTATGGTCCGACAACCCAAACGTGATCTATCCGGCCTCTGTCTTCCGGGAACGGCATCGCGACATTCACGGTACGGATCTGGAACATTACGCCTTCAATGTGGAACGCTTGTGGCTCGGCTGCTCGTAGATTCCAGCGGTCCTACGTTCCGTGCT‑GCGCGGTGTCATCAATACGGGTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATcg < 1:211980/247‑1 (MQ=255) gAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCCGCGTTCCCCCGTTTCTTGCT‑GCGCGGTGACATCAATACGGGTTACGTCCCACA‑GCTGTCCATTAATACCCGGGGCAT‑CACCCCGACTGATATCGCGAc > 1:53904/1‑251 (MQ=255) agcagcTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGGACCCTCCAGCGTTCCCCCGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCCCC‑GCTGGCCCTTAATACCCGGGGCAT‑CACCCCGACTGATATCGCGACTGCGA‑ATTgg > 1:384692/1‑251 (MQ=255) cagcTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCTCGCGTACCGTCCCGCGTTCCCACGCTCCCTGCT‑GCGCGGGGACATCCATACGGTTGACGTCCCCAA‑GCAGTCCATTAATACCCGGGGCATTCACCC‑GACTGGAATTGCGAATGCGG‑ATTgggg > 2:99830/1‑249 (MQ=255) cagcTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGGACCGGCCCGCGGTTCCACCGTCCCTGCC‑GCGCGGTGACATCCATAAGGGTGACGTCCCCCA‑GCTGGCCATTAATAACCGGGTCCT‑CTACCAGACCGGTATCGCGGCCGCGA‑ACTgggg > 1:85755/1‑249 (MQ=255) cACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCCTCCCCGCGTACCGTCCCGCGTTTCCCCCTTCCTTTCTTGC‑CGGGGAAATCACAACGGTTGACGTCCCCCC‑GCTGTCCCTTTATACCCGGGTACC‑CACCCCGACCGATATCGCGACCGAGA‑ATTGGGGAA‑cccg > 2:337845/1‑249 (MQ=255) gTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCAt < 1:125316/250‑1 (MQ=255) ccGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACCTTACGCCTTCAATACGGCACGCTTGCGGCTCCTACGCACGTACCGCCCACCGTTCCCACGTTCCTTGAT‑GCGCGGTGACATCAATCCCGCTGACGTCCCCCA‑GATGTCCATTAATAACCCGGTCAT‑CCCACCGACTGATATCCCGACTGCGA‑AATGGCGAA‑CCAGCCATgtt > 1:224289/1‑249 (MQ=255) gTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCCCGCGTACCGCCCACCCTTCCCCCCTTCCTTGCC‑GCGCCGGGACATCCATACGGGTGACGGCCCCCC‑GCCGTCCCTTTATAACCGGGGCAT‑CCCCCCACCTTATATCCCGACTGCGACATTGG‑GAA‑CCCGccctcattt > 2:164612/1‑244 (MQ=255) caacccaaccGGTATCTTTCCAGCCCCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCa < 2:193961/251‑1 (MQ=255) cAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCa < 1:190415/251‑1 (MQ=255) cccAAACGGTAGCTTTCCATCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTTCGACTCTGGAACATTACGCCTTCAATTTGGCACTCTTGCGGCTCGTCCGCGCGTACCGTCCAGCTTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTGGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCTCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑Gtt < 2:108571/251‑1 (MQ=255) ggTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGGACCGTCCAGCGTTCCCACGTTCCTTTCT‑GCGCGGTGACATAAATACGGATGACGGCCCCCA‑GCTGTACATTAATACCCGGGGCAT‑CACCCCGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGggagc > 1:461971/1‑250 (MQ=255) ggTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGGACCGGCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGGCATCAATACGGCTGGCGTCCCCCA‑GCTGTCCATTCATACCCCGGGCAG‑CACCCCGACCGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCACGATTTCA‑GGTGgcagac > 2:331841/1‑249 (MQ=255) gTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCg < 1:341964/184‑1 (MQ=255) gTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGCACCGTCCCCCGTTCCCACCCTCCTTGCT‑GCGCGGGGACATCCATACCGTTGACGTCCCCCC‑GCTGTCCCTTTATACCCCGGTCCT‑CCCCCACCCTGATATCCCCAGCGCGA‑ATTTGCGAA‑CCCGCCATTATTTCA‑CTTgggcgca > 2:97786/1‑245 (MQ=255) aTCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCCCA‑CCTGTCCCTTTATACCCCGGGCAT‑CACCCAGACCGATATCCCGACTGCGA‑ATTGGCGAA‑ACAGCCCTGCTTTTA‑GTTGgccgccagc > 2:98678/1‑244 (MQ=255) cccGGGAACGCCCTCGCGCCATTCACGTGACGGATCTGGACCATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCTGCGTCCCCCCGTACCTTGCT‑GAGCGGTGACAGCAATACGGTTGACGTCCCCCG‑GCTGCCCATTAAGACCCGGGTCAT‑CGCCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGTCAGCAAGCGCATCGGAAGActgtctgt < 2:269483/250‑1 (MQ=255) gggAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCCCGTACCGCCCAACGGTCCCACCTTCCTTGCT‑GCGCCGCGACCTCCCTCCGGTTGACGTCCCCCA‑GCTGTCCCTTAATACCCGGGTCAT‑CACCCCGACTGATATCGCGGCTGCGA‑ATTTGCGAA‑CCAGCCCAGATTTCA‑GTTGGCAGCAAGCGCAACGGAAGACTGTCGGTG‑Ac > 2:319727/1‑251 (MQ=255) gggAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCCCGCGTACCGTCCAGCGTTCCCCCGGTCCTTTCT‑GCGCGGGGACATCAATACGGGTGACGGCCCCCC‑GCCGTCCCTTTATACCCCGGTCCT‑CACCCCGACTGATATCGCGACCTCGG‑ATTTGCGAA‑CCAGCCATGATTTCATGTGGGC‑GCAAGGGCCTCGGAAGActgtcttgtgc > 2:380179/1‑246 (MQ=255) aaCGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGAGTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GGTGGCAGCAAGCGCATCGGAATACTGTCTGTG‑ACCAg < 2:242340/251‑1 (MQ=255) ccGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCCCA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACGGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGc < 2:367406/250‑1 (MQ=255) gCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGGGACATCAATACGGGTGACGTCCCACA‑GCTGTCCCTTAATACCCGGGGCAT‑CACCCCGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGc > 1:122094/1‑251 (MQ=255) aTCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCCCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGGTGACGTCCCCCA‑GCTGGCCATTAATACCCGGGTCAT‑CAACCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTTC‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGc > 1:15806/1‑249 (MQ=255) gcCATTCACGTTAAGGATCTGGAACATCACGCCTTCAATATGGAACGCTTGCGGCTCGTCCCCGCCAACCGTCCCGCGCTCCCACCTTCCTTGCC‑GCGCGGGGACATCAATCCCGTTGCCGGTCCACAAGCGGTCC‑TTCATACACGGGTCAT‑CACCCCGACTGATATCGCTCCTGCGA‑ATTGGCGGA‑ACAGGCATGATTTTA‑GTTGGGAGCCAGCGCATCGGGAGAATGTCTGTG‑AGCAGCGGccggaagg > 2:439315/1‑244 (MQ=255) ccACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTGGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGtt < 2:265176/250‑1 (MQ=255) cACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGGATCCTCCAGGGTTACCACGATCCTTTAT‑GCGCGGTGACCTCAATACGGTTGACCTACCCCA‑GCTGTCCATTAATACCCGGGGCAT‑CACCCAGACTGATATCGCAACTGCGG‑CTTAGCGGA‑CCAGCCATGATTTCA‑GTTGGCCGCAAGCGCATCGGAAGACTGTCTGTG‑GCCCGCGGCAGAAGGCCGGtgg > 1:45719/1‑249 (MQ=255) gTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCCGCGTTCCCACGGTCCTTGCT‑GCGCGGGGACATCAATACGGGTGACGTCCCCCA‑GCTGTCCCTTAATACCCGGGTCAT‑CACCCCGACTGATATTCCGACTGCGG‑ATTGGGGAAACCA‑CCCTTATTTCC‑GTTGGCAGCAAGCGCACCGGAAGACTGTGTGTGGACCA‑CGGCAGAAGGGCGGGTgggg > 2:264179/1‑250 (MQ=255) ttACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGGCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTTGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGgcg > 1:370469/1‑251 (MQ=255) cGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCCGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTTA‑GTTGGCAGCAAGCGCATCGGAAGACAGTCTGTG‑ACCCGCGGCAGAAGGCCGGGTGGgcgc > 1:139205/1‑249 (MQ=255) tGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCCCGCGTACCCTCCCGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCCCA‑GCTGTCCCTTAATACCCGGGGCCT‑CACCCAGAATGATATCGCCACAGCCA‑ATTGGCGAA‑CCAGCCCTGATTTCA‑GTTTGCAGCAAGCGCATCGGAAGACCGTCTGTG‑GCCCGCGGCAGAAGGGCGGTTGGGCGCcgcggttg > 2:199022/1‑247 (MQ=255) aaCATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGGACCGTCCAGCGTTCCCACGTTCCCTGCT‑GCGCGGGGGCATCAATACGGGTGACGGCCCCCA‑GCTGTCCCTTAATACCCGGGGCAT‑CACCCCGACCGATATCGCGACCGCGA‑ATTGGCGAA‑CCAGCCATGGTTTCA‑GTTGGCAGCAAGCGCATCGGGAGACCGGCCGTG‑ACCAGCGGCAGGAGGCCGGTTGGGCGCAGCGGTAGCAc > 2:88945/1‑251 (MQ=255) aCATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCAcc < 1:316334/251‑1 (MQ=255) aCATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCAcc < 1:331841/251‑1 (MQ=255) cATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCa < 1:410734/251‑1 (MQ=255) tGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGAt < 1:368171/249‑1 (MQ=255) gCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGc < 1:269257/251‑1 (MQ=255) ggCTCGTCCGCGCGTCCCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACC‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGCAGAAACCAGAATACTGGATGGCTc > 1:110963/1‑251 (MQ=255) cgcgcgTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CGCCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGc < 1:328596/251‑1 (MQ=255) cgcgTACCGTCCAGCGTTCCCACGTGCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCa < 2:370469/251‑1 (MQ=255) ccGTCCAGCGTTCCCTCGTTCCTTTCT‑GCGCGGTGACATCAATTCGGTTGACGTCCCACA‑GCTGTCCATTAAGACCCGGGTCAG‑CACCCAGACTGATAGCGCGACATCTA‑ATTGGCGAA‑CCAGCCATTATTTGA‑TTTGGCAGCAAGCGCATCGGAGTAGGGTCTGTG‑GCCAGCGGCAGAATGCGGGTTCGGCGCAGCGTCAGCACCATTGGT‑GAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAAt < 1:430998/250‑1 (MQ=255) ccAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGa < 1:199022/250‑1 (MQ=255) ttCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATcaaca > 1:36946/1‑250 (MQ=255) tCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCGGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCGGAATACTGGATGGCTCAAAGAAGCCACGAATACGATcaacaa < 1:200942/250‑1 (MQ=255) ccccACGTTCCTTGCA‑GCGCGGTGACATCAATACGGTGGACGTCCCACA‑GCTGGCCAGTAATCCCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAAGACGATCAACAAt < 2:468151/250‑1 (MQ=255) cACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCt < 1:98678/251‑1 (MQ=255) gTTCCGTGCT‑GCGCGGTGAAATCAATACGTTTGACGTCCCACG‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATACCGCGACGGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTcgc < 2:142268/251‑1 (MQ=255) gccTTGCT‑GCGCGGTGACATCAATACGGTGGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAAGACTGGATGTGTCAAAGAAGCCACGAATACGAGCAACAATGCTcgcc < 2:224289/249‑1 (MQ=255) ccTTGCT‑GCGCGGTGACAGCAATACGGTTGACGCCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTcgccg < 2:139205/250‑1 (MQ=255) tgct‑gcGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACGGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCAGCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCtt < 2:231065/250‑1 (MQ=255) t‑gcGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGcc > 2:195021/1‑251 (MQ=255) gggACATCAATCCGGTTAACGCCCCACA‑GCTGTCCAGTAATACCCGGGTCAT‑CACCCAGACTGATATCGCTACTGCGA‑ATTGGCGAA‑CCTGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATTCGATCAACAATGCTCGCCGCTTCGCCACAGGt < 1:86438/249‑1 (MQ=255) cATCAATCCGGTTGACGCCCCCCA‑GCTGGCCATTAAGACCCGGGTCCT‑CCCCCAGACTGATATCGCGACTCCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAAGACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATc < 2:167342/251‑1 (MQ=255) cATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATc < 1:337845/251‑1 (MQ=255) ggTTGACGTCCCACA‑GCGGTCCATTAATCCCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCa < 2:36946/251‑1 (MQ=255) gTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCAt > 1:183318/1‑251 (MQ=255) gTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCAt > 1:320343/1‑251 (MQ=255) ccccACG‑GCTGTCCATTAATCCCCGGGTCCT‑CACCCAGACTGATATCGCGACGGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCGTCGCCACAGGTGATCGACACTTCATCGCCGtt < 2:31841/250‑1 (MQ=255) aca‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGAGCGACACTTCATCGCCGTTGCTc < 1:336626/251‑1 (MQ=255) | CGTCTGACTGTTGAAGTAGAACGGGAAGTGCGCCCAGGAAGGCTGACCGAAATAAACAAGCAGCTCCACTTGTCCGTCAACCCAAACGGTATCTTTCCAGCCTCTGTCTTCCGGGAACGGCATCGCGCCATTCACGTTACGGATCTGGAACATTACGCCTTCAATATGGAACGCTTGCGGCTCGTCCGCGCGTACCGTCCAGCGTTCCCACGTTCCTTGCT‑GCGCGGTGACATCAATACGGTTGACGTCCCACA‑GCTGTCCATTAATACCCGGGTCAT‑CACCCAGACTGATATCGCGACTGCGA‑ATTGGCGAA‑CCAGCCATGATTTCA‑GTTGGCAGCAAGCGCATCGGAAGACTGTCTGTG‑ACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAG‑GGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTC > NC_000913/3161314‑3161815 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |