| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,906,769 | 0 | A | C | 32.3% | 90.8 / 12.0 | 64 | Y98D (TAT→GAT) | rlmA | 23S rRNA m(1)G745 methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (31/11); new base C (0/20); total (32/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGTGGCAGTAATGACCCAGCCGCCGGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGC > NC_000913/1906527‑1907008 | cGTGGCAGTAATGACCCAGCCGCCGGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTcac < 1:367899/251‑1 (MQ=255) aggaaTGCCCCAGCCGCCGGGCTTCACTACTCGTGCTAATTCTGCTGCTTTACACGGCGCGTAAATACGTAGTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGc < 2:248437/248‑1 (MQ=255) aGCCGCCGGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGc > 1:285317/1‑251 (MQ=255) gccgccGGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCa < 1:426942/251‑1 (MQ=255) cgccgGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCAcc > 1:240237/1‑251 (MQ=255) cgGGCTTCACTACTCGTGCTCATTCTTCTGCTTTACACGGCGCGTAAATCCGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGACGCGACACACAAAGTGCCCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCACACGTGGTGCTTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACCTCCAATATCCAGCAccgcc > 2:33866/1‑251 (MQ=255) cgGGCTTCACTACTCGTGCAAATGCTTCTGCTTTACACGGCGCGTAAATACTTATTATGGCGCCCAAACTGTTATGGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGGGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTTCCTT‑CGAAACAGCCAGACCAAACGGGGTGATTTCGGGCACCGC‑ATCGGCAAATGCGTGTGTGAAAGACCCTTCACCACAGCCAATAGCCAGCAccgcc < 2:48469/251‑1 (MQ=255) actactCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATGCGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAACCGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCTTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTTTGTTTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCtt < 1:289146/251‑1 (MQ=255) aaTTCTTCTGCTTTACACGGCGCGTAAATCCGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCg > 1:147070/1‑251 (MQ=255) tcttcctGCTTTACACGCGGCGAAAATACGTATTAGGGCGTCCAACCGGGTATGGAAAAACGGAAACCGGTGGCGGGAGGCAACAAAAAAAGTACCCTGGGGATAGGGTTGCC‑CCGCCGTTTTTATCGCTACCTT‑CGAAACATCCAGACCAACCGTGGTGTTTGCGGGCAACGC‑TTCGGCAAATGCGTGTGTTTAATCCCCTTCCCCACAGCCAATATCAAGCACCGCCGTGGCCTTATCATCAAGCCGt < 2:128692/245‑1 (MQ=255) tctGCTTGACACGGCGCGAAAAGACGTAGTATGGCGTCCACACTGGTATCGAAAAGCGGCAAAGGGTGGCTGGAAGCCACAAAAAAAGTGCCCTGCGGATAGCGTTCCC‑CCCCCGCTTTTCTCCCTACCTC‑CGAAACACCCATACCAACCGTGGGGATTTCGGGCAACGC‑ATGGGCAAAGTCTGGTGGGTAACCCTCTTCCCCGCAGCCAAGATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTc < 2:254391/248‑1 (MQ=255) gtccccGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTg > 2:274838/6‑251 (MQ=255) gcgcGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGAc > 2:377422/1‑250 (MQ=255) gcgTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAAt > 2:112149/1‑251 (MQ=255) gcgTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAAt > 1:278737/1‑251 (MQ=255) gTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGc > 1:58056/1‑251 (MQ=255) atGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATCTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCgg > 2:407120/1‑251 (MQ=255) agggCGCCCATACGGGTAGCGAAAAACGGCAAACGGTGGCTGAAAGCGACAAAAAAAGTGCCCGGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACAAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAAGGCGTGGGTGTAATCCCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCg < 2:418635/248‑1 (MQ=255) actggttggggAAAACGCCAACGGGGGGCGGGAAGCAACAAAAAAAGTGACTGGCGGATGGCGTTCCG‑CCGCCTTTTTTACCGCTACCTT‑GGAAACACCCAGACCAAACGGGGTGATTCCGGGCAACGC‑ACCGGCAAATGCGTGTGTTTAATCCCCTCCCCCACACCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTc < 2:138145/242‑1 (MQ=255) ggTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCgg > 2:144101/1‑251 (MQ=255) aTCGGAAAACGGCAAACGGTGGCGGGAAGCGACACAAAAAGTTACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTCCCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTTTAATCCCCTTCACCACAGCCAATACCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCAt < 1:285982/251‑1 (MQ=255) aaCGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGa > 1:38595/1‑250 (MQ=255) acggaaaccGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGC‑TTTCGGCCGCCGCTTTTATCGCTACCTT‑CGAAACACCCAGACCAAACGTGTTGATTTCGGGAAACGC‑TTCGGAAAATGCGTGGGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGTCATCTAAGAAt < 1:370554/243‑1 (MQ=255) aCGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGCGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATACTGTCCGGCATCTAAGAAt > 2:64360/1‑251 (MQ=255) ggTGGCTGGAAGCGACACACAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGCAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTACGAATGCGCGGCGt > 2:206078/1‑251 (MQ=255) gTGGCTGGAAGCGCCCAAAAAAGGGACCTGCGGATAGCTTTCCG‑CCGCCGCTTTTATCGCTCCCTT‑AGAAACACCCAGACCAAACGGGGTGATTTCGGGCAGCGC‑ATCGGCAAATGCGTGTGTGTAATCCCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTg < 1:1459/251‑1 (MQ=255) cgggAAGCGACACAAAAAGTGCCCTGGGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGGGGTGATTTCGGTAAACGA‑TTGGGCAAATGCGTGTGTGTAATACCTTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTg < 1:33866/249‑1 (MQ=255) aaaGCGACACAAAAAGTGCCCTGCGGAGAGCTTTCCG‑CCGCCGTTTTTATCGCTACCTT‑CGAAACACCCAGCCCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAAGGCGTGTGTGTAATCCCCTTCCCCACAGCCAATACCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGcat < 2:101974/250‑1 (MQ=255) aGCGACACACACAGTGACCTGCGGATAGAGTTTCG‑CCACCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGcatct > 1:159961/1‑250 (MQ=255) gACACACAAAGTGACCTGCGGATAGCGTTTCG‑ACGCCGCTTTTATCGCTACCTT‑CGAACCATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCAttt > 2:48267/1‑251 (MQ=255) aacacAAAAAGTGACCTGCGGAGAGCGTTTCG‑CCGCCGCTTTTATCTCTCCCTC‑CAAAACAACCAGACCAACCGGGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGGGTGTGTAAACCCCTTCACCACAGCAAATATCCACCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCAttt < 1:48267/250‑1 (MQ=255) caaaaaaaGTGACCTGCGGATAGCGTTTCG‑CCGCCTCTTTTATCGCTACCTT‑CGAAGCATCCATACCAACCGGGTTGATTTCGGGCAACGC‑ATCGGCAAATGCTTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTcc < 1:59038/248‑1 (MQ=255) aaaggacccTGGGGATAGGGTTCCG‑CCGCCGATTTTACCGCTCCCTT‑CAAAACATCAAGACCAAACGGGGTGTTTTCGGGCAACGC‑ACGGGCAAAGGCGTGTGTGTAATCCCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCt < 2:278737/244‑1 (MQ=255) aGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAACCATCCAGACCACACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATGCCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCCAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGt > 1:202385/1‑251 (MQ=255) gggACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACACCCAGACCAAACGTGGGGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATCCCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTc < 1:251465/249‑1 (MQ=255) gACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCCCCATT‑CGAAACCTCCAGACCCAACGTGGTGATTTCGGGCCACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCAAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACACTTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGCATGCGCGGCGTGCTTGACTCATTTCCGCGCTGTCGc > 2:278907/1‑251 (MQ=255) cccTGCGGATAGCGTGTCC‑CCCCCGTTTTTATCGCT‑CCTTGCAAAACATCCAGACCAAACGTGGTGATTGCGGGCAACGC‑ATCGGCAAAGGCGTGTGTGTAATACCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGcc < 2:388971/250‑1 (MQ=255) cTGCGGATAGCTTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGCCCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATCCCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATgcgc < 1:378456/218‑1 (MQ=255) cTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATgcgc > 2:378456/1‑218 (MQ=255) aTAGCGTTCCG‑CCGCCGCTTTTACCGCTACCTT‑CGAAACACCCAGACCAATCGTGGTGTTTTCGGGCAACGC‑ATCGGAAAAGGCGTGTTTTTAATCCCCTTCACCACAGCCAATACCCAGCTCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCTCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCAc < 1:455584/251‑1 (MQ=255) tAGCGTTTCG‑CCGCCGATTTTATCGCTACCTT‑CGAAACATACAACCCCAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGCGTGTGTAATACCCTTCACCACAGCGAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCACTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGTTAATGTCAGGCATCTAAGACTGCGCGGCGTGCTTGCATAATTTCCGCGCTGTGGCCCGGATCACg > 1:467854/1‑251 (MQ=255) aggcctttcccccgccgcTTTTCTCGCTCCCTG‑CGAAACGTCCAGACCAACCGTGGTGTTTCCGGGCAACGC‑ACGGGCAAAGGCGTGGTTGTAATTCCTTTCCCCCCGGCCAAGATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTGCCGCGCTGTCGCCCGGATCAc < 2:285317/240‑1 (MQ=255) gTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGTCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACATTTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACTAGAc > 1:14658/1‑251 (MQ=255) g‑ccgccgcTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGttt > 1:326333/1‑251 (MQ=255) ccgcTTTTATCGATACCTT‑CGAAACATCCAGACCAACCGTACTGATTTCGGGCAACGC‑CTCGGCAAATGCGTGTGTGTAATACCCTTCACCATAGCGAATATCCAGAACTGCCGTGGAATTATAATAAAGCCGTTCCCTCAGTTGGGCGACAGTTGCATCACGCAGCGGCGGATAATGTCCGGCAACTAAGAATGCGCGGCGAGCTTGCCTAATTTCCGCGCTGTCGACCGGCTCACGAGACCGTTTAt > 2:465777/1‑249 (MQ=255) ttATCGCTACCTT‑CGAAACATCCAGACCAACCGGGGTGATTTCGGGCAACGC‑ATCGGAAAAGGCGGGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAAc < 1:482776/250‑1 (MQ=255) ttATCGCTACCTT‑CAAAACATCCAGACCAACCGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATCCCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAAc < 1:32814/250‑1 (MQ=255) ccGCTACTTT‑CGAAACATCCAGACCAAAGGTGGTGATTTCGGGAAACTC‑ACCGGCAAACGCGGGTGTGTAATCCCCTTCACCACAGCCAATATCCACCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGgc < 1:194484/250‑1 (MQ=255) gcccccttagaacatacaagcccAATCGTGGTG‑TTTTGGGCAACCCCATCGGAAAATGGGTTGGTGTAAACCCCTTCCCCACAGCCAATTTCCGGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGgcag < 2:8485/230‑1 (MQ=255) gAAACATCCAGACCAAACGTGGTGCTTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCAc > 2:306087/1‑142 (MQ=255) gAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCAc < 1:306087/142‑1 (MQ=255) aGACCAAACTTGGTGATTTCGGGCAACGC‑ATCGACAAATGCGTGTGTGTAATCCCCCTCCCCCCAGCCAACATCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCcttc < 1:913/251‑1 (MQ=255) cAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATAACCTTCTTTc > 2:18763/1‑251 (MQ=255) cAAACGAGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGAGACAATTGCATCACGCAGCGGCTGATACTGTCCGGCATCTTAGAATGGGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGACTCACGAGCCCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTGCTTTc > 2:18757/1‑251 (MQ=255) aaaCGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCg > 1:134273/1‑251 (MQ=255) gATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCatataa > 2:335003/1‑248 (MQ=255) aaccacctCGGCAATTGCGGGTGTGAAATCCCCCCCCCCACAGCCAAGCTCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTGCGCCATATCAAACTGATGTc < 2:240237/244‑1 (MQ=255) cGGCAAATGCGGGTGTGTAATCCCCTCCACCACAGCCAATATCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGa < 1:340184/251‑1 (MQ=255) aatgcggggtggtAATCCCCTTCCCCCCAGCCAATACCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTGCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGat < 1:486883/240‑1 (MQ=255) aaTGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGAc > 1:6003/1‑247 (MQ=255) aTGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGat > 1:149579/1‑250 (MQ=255) cGTGTGTGTAATACACTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGatat > 1:308253/1‑249 (MQ=255) gtgtgtgtAAGCCCCTCCCCCACAGCCAATACCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTGGCATCATTTCCGCGCTGTCGCCCGGAGCACGAGACCGTTTATGCTGAACGGGCAGCAGAGTGACATACCCTTCTGTCGCCATATCAAACTGATGTCGCTGGGGACAGAGATAGc < 2:202385/251‑1 (MQ=255) tgtAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCttt > 1:159177/1‑208 (MQ=255) | CGTGGCAGTAATGACCCAGCCGCCGGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGCTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCG‑CCGCCGCTTTTATCGCTACCTT‑CGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACGC‑ATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGC > NC_000913/1906527‑1907008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |